Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 HMGN2P6-201ENST00000551091 273 ntBASIC4.38□□□□□ -1.71
RNF220Q5VTB9 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC4.38□□□□□ -1.71
RNF220Q5VTB9 AC091304.9-201ENST00000612091 226 ntBASIC4.38□□□□□ -1.71
RNF220Q5VTB9 AC087241.4-201ENST00000612441 480 ntBASIC4.38□□□□□ -1.71
RNF220Q5VTB9 AL159972.1-201ENST00000625150 448 ntBASIC4.38□□□□□ -1.71
RNF220Q5VTB9 AC110994.2-201ENST00000635481 492 ntBASIC4.38□□□□□ -1.71
RNF220Q5VTB9 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.38□□□□□ -1.71
RNF220Q5VTB9 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
RNF220Q5VTB9 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
RNF220Q5VTB9 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RNF220Q5VTB9 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.38□□□□□ -1.71
RNF220Q5VTB9 AC007390.2-201ENST00000606229 3803 ntBASIC4.38□□□□□ -1.71
RNF220Q5VTB9 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
RNF220Q5VTB9 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
RNF220Q5VTB9 U8.3-201ENST00000363321 132 ntBASIC4.37□□□□□ -1.71
RNF220Q5VTB9 RNA5SP151-201ENST00000365632 117 ntBASIC4.37□□□□□ -1.71
RNF220Q5VTB9 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RNF220Q5VTB9 Y_RNA.505-201ENST00000384489 102 ntBASIC4.37□□□□□ -1.71
RNF220Q5VTB9 MIR135A2-201ENST00000384854 100 ntBASIC4.37□□□□□ -1.71
RNF220Q5VTB9 AL590762.2-201ENST00000395798 571 ntBASIC4.37□□□□□ -1.71
RNF220Q5VTB9 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.37□□□□□ -1.71
RNF220Q5VTB9 RNU6-516P-201ENST00000411381 104 ntBASIC4.37□□□□□ -1.71
RNF220Q5VTB9 RPL23AP27-201ENST00000415161 451 ntBASIC4.37□□□□□ -1.71
RNF220Q5VTB9 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.37□□□□□ -1.71
RNF220Q5VTB9 C1DP2-201ENST00000418167 426 ntBASIC4.37□□□□□ -1.71
RNF220Q5VTB9 FAR2P4-202ENST00000425399 584 ntBASIC4.37□□□□□ -1.71
RNF220Q5VTB9 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC4.37□□□□□ -1.71
RNF220Q5VTB9 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.37□□□□□ -1.71
RNF220Q5VTB9 AC009961.2-201ENST00000435771 251 ntBASIC4.37□□□□□ -1.71
RNF220Q5VTB9 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.37□□□□□ -1.71
RNF220Q5VTB9 AC112498.1-201ENST00000444401 332 ntBASIC4.37□□□□□ -1.71
RNF220Q5VTB9 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.37□□□□□ -1.71
RNF220Q5VTB9 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.37□□□□□ -1.71
RNF220Q5VTB9 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.37□□□□□ -1.71
RNF220Q5VTB9 RPS5P7-201ENST00000456664 608 ntBASIC4.37□□□□□ -1.71
RNF220Q5VTB9 AC078817.1-201ENST00000492623 435 ntBASIC4.37□□□□□ -1.71
RNF220Q5VTB9 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RNF220Q5VTB9 RNA5SP497-201ENST00000516081 97 ntBASIC4.37□□□□□ -1.71
RNF220Q5VTB9 RNU6-798P-201ENST00000516912 103 ntBASIC4.37□□□□□ -1.71
RNF220Q5VTB9 DUXAP2-201ENST00000519198 589 ntBASIC4.37□□□□□ -1.71
RNF220Q5VTB9 IGLV2-28-201ENST00000520681 304 ntBASIC4.37□□□□□ -1.71
RNF220Q5VTB9 HMGN1P28-201ENST00000521340 364 ntBASIC4.37□□□□□ -1.71
RNF220Q5VTB9 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.37□□□□□ -1.71
RNF220Q5VTB9 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RNF220Q5VTB9 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.37□□□□□ -1.71
RNF220Q5VTB9 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.37□□□□□ -1.71
RNF220Q5VTB9 AC133555.2-201ENST00000550213 292 ntBASIC4.37□□□□□ -1.71
RNF220Q5VTB9 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.37□□□□□ -1.71
RNF220Q5VTB9 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.37□□□□□ -1.71
RNF220Q5VTB9 AC087481.2-201ENST00000565492 330 ntBASIC4.37□□□□□ -1.71
RNF220Q5VTB9 COX6CP3-201ENST00000580869 223 ntBASIC4.37□□□□□ -1.71
RNF220Q5VTB9 NRBF2P1-201ENST00000587407 859 ntBASIC4.37□□□□□ -1.71
RNF220Q5VTB9 DUXAP4-201ENST00000603046 613 ntBASIC4.37□□□□□ -1.71
RNF220Q5VTB9 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.37□□□□□ -1.71
RNF220Q5VTB9 AC004908.2-201ENST00000609090 574 ntBASIC4.37□□□□□ -1.71
RNF220Q5VTB9 AC090970.3-201ENST00000612566 866 ntBASIC4.37□□□□□ -1.71
RNF220Q5VTB9 AL512624.1-201ENST00000613638 469 ntBASIC4.37□□□□□ -1.71
RNF220Q5VTB9 AC091834.1-201ENST00000614543 472 ntBASIC4.37□□□□□ -1.71
RNF220Q5VTB9 MIR6729-201ENST00000618194 65 ntBASIC4.37□□□□□ -1.71
RNF220Q5VTB9 AC072046.2-201ENST00000618366 268 ntBASIC4.37□□□□□ -1.71
RNF220Q5VTB9 AC233309.1-201ENST00000619522 751 ntBASIC4.37□□□□□ -1.71
RNF220Q5VTB9 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RNF220Q5VTB9 AL138713.1-201ENST00000624026 2130 ntBASIC4.37□□□□□ -1.71
RNF220Q5VTB9 INTS6P1-201ENST00000504674 2530 ntBASIC4.37□□□□□ -1.71
RNF220Q5VTB9 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.37□□□□□ -1.71
RNF220Q5VTB9 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RNF220Q5VTB9 NOL8P1-201ENST00000508336 3529 ntBASIC4.37□□□□□ -1.71
RNF220Q5VTB9 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.37□□□□□ -1.71
RNF220Q5VTB9 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.36□□□□□ -1.71
RNF220Q5VTB9 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
RNF220Q5VTB9 AC105074.1-201ENST00000623380 3095 ntBASIC4.36□□□□□ -1.71
RNF220Q5VTB9 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.36□□□□□ -1.71
RNF220Q5VTB9 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RNF220Q5VTB9 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.36□□□□□ -1.71
RNF220Q5VTB9 RNA5SP22-201ENST00000365393 109 ntBASIC4.36□□□□□ -1.71
RNF220Q5VTB9 RNU6-637P-201ENST00000384050 107 ntBASIC4.36□□□□□ -1.71
RNF220Q5VTB9 RNU5A-6P-201ENST00000384136 116 ntBASIC4.36□□□□□ -1.71
RNF220Q5VTB9 MIR19A-201ENST00000384878 82 ntBASIC4.36□□□□□ -1.71
RNF220Q5VTB9 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
RNF220Q5VTB9 RNU6-192P-201ENST00000391253 100 ntBASIC4.36□□□□□ -1.71
RNF220Q5VTB9 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RNF220Q5VTB9 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC4.36□□□□□ -1.71
RNF220Q5VTB9 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.36□□□□□ -1.71
RNF220Q5VTB9 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC4.36□□□□□ -1.71
RNF220Q5VTB9 AC010975.2-201ENST00000427781 588 ntBASIC4.36□□□□□ -1.71
RNF220Q5VTB9 RBMY2QP-201ENST00000429799 1147 ntBASIC4.36□□□□□ -1.71
RNF220Q5VTB9 RPL35AP22-201ENST00000436855 335 ntBASIC4.36□□□□□ -1.71
RNF220Q5VTB9 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
RNF220Q5VTB9 FTH1P1-201ENST00000437933 532 ntBASIC4.36□□□□□ -1.71
RNF220Q5VTB9 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.36□□□□□ -1.71
RNF220Q5VTB9 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.36□□□□□ -1.71
RNF220Q5VTB9 TPT1P14-201ENST00000448018 505 ntBASIC4.36□□□□□ -1.71
RNF220Q5VTB9 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.36□□□□□ -1.71
RNF220Q5VTB9 AC011825.1-201ENST00000484967 388 ntBASIC4.36□□□□□ -1.71
RNF220Q5VTB9 RN7SL629P-201ENST00000489622 285 ntBASIC4.36□□□□□ -1.71
RNF220Q5VTB9 AC146944.2-203ENST00000502493 354 ntBASIC4.36□□□□□ -1.71
RNF220Q5VTB9 AC096751.1-202ENST00000502691 1067 ntBASIC4.36□□□□□ -1.71
RNF220Q5VTB9 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC4.36□□□□□ -1.71
RNF220Q5VTB9 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.36□□□□□ -1.71
RNF220Q5VTB9 AC139495.1-202ENST00000513164 354 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 143.3 ms