Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
CCDC178Q5BJE1 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC178Q5BJE1 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5.01□□□□□ -1.61
CCDC178Q5BJE1 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CCDC178Q5BJE1 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC5.01□□□□□ -1.61
CCDC178Q5BJE1 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
CCDC178Q5BJE1 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC5□□□□□ -1.61
CCDC178Q5BJE1 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC5□□□□□ -1.61
CCDC178Q5BJE1 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
CCDC178Q5BJE1 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
CCDC178Q5BJE1 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCDC178Q5BJE1 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
CCDC178Q5BJE1 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
CCDC178Q5BJE1 OR11H4-201ENST00000315409 1082 ntBASIC5□□□□□ -1.61
CCDC178Q5BJE1 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC5□□□□□ -1.61
CCDC178Q5BJE1 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CCDC178Q5BJE1 RNU1-15P-201ENST00000353977 144 ntBASIC5□□□□□ -1.61
CCDC178Q5BJE1 SNORA70.2-201ENST00000364506 135 ntBASIC5□□□□□ -1.61
CCDC178Q5BJE1 RNU4-12P-201ENST00000365233 139 ntBASIC5□□□□□ -1.61
CCDC178Q5BJE1 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CCDC178Q5BJE1 RNU6-952P-201ENST00000391164 108 ntBASIC5□□□□□ -1.61
CCDC178Q5BJE1 LAP3P1-201ENST00000403648 294 ntBASIC5□□□□□ -1.61
CCDC178Q5BJE1 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5□□□□□ -1.61
CCDC178Q5BJE1 C1DP2-201ENST00000418167 426 ntBASIC5□□□□□ -1.61
CCDC178Q5BJE1 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CCDC178Q5BJE1 AL513174.1-201ENST00000423182 629 ntBASIC5□□□□□ -1.61
CCDC178Q5BJE1 AC234779.1-201ENST00000425910 285 ntBASIC5□□□□□ -1.61
CCDC178Q5BJE1 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC5□□□□□ -1.61
CCDC178Q5BJE1 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC5□□□□□ -1.61
CCDC178Q5BJE1 BTF3P10-201ENST00000433415 495 ntBASIC5□□□□□ -1.61
CCDC178Q5BJE1 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5□□□□□ -1.61
CCDC178Q5BJE1 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5□□□□□ -1.61
CCDC178Q5BJE1 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCDC178Q5BJE1 RBMX2P4-201ENST00000441256 376 ntBASIC5□□□□□ -1.61
CCDC178Q5BJE1 MTND5P14-201ENST00000441481 1267 ntBASIC5□□□□□ -1.61
CCDC178Q5BJE1 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC5□□□□□ -1.61
CCDC178Q5BJE1 NUTF2P3-201ENST00000448540 384 ntBASIC5□□□□□ -1.61
CCDC178Q5BJE1 AC098824.1-201ENST00000453565 980 ntBASIC5□□□□□ -1.61
CCDC178Q5BJE1 BX322784.1-201ENST00000455793 1077 ntBASIC5□□□□□ -1.61
CCDC178Q5BJE1 AC099563.1-201ENST00000456086 418 ntBASIC5□□□□□ -1.61
CCDC178Q5BJE1 AC005008.1-201ENST00000456151 612 ntBASIC5□□□□□ -1.61
CCDC178Q5BJE1 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC5□□□□□ -1.61
CCDC178Q5BJE1 PPIAP21-201ENST00000464473 501 ntBASIC5□□□□□ -1.61
CCDC178Q5BJE1 ACTR3P3-201ENST00000480448 893 ntBASIC5□□□□□ -1.61
CCDC178Q5BJE1 AC105252.1-201ENST00000503089 286 ntBASIC5□□□□□ -1.61
CCDC178Q5BJE1 AC021146.3-201ENST00000511911 260 ntBASIC5□□□□□ -1.61
CCDC178Q5BJE1 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC5□□□□□ -1.61
CCDC178Q5BJE1 AC022483.1-201ENST00000514020 567 ntBASIC5□□□□□ -1.61
CCDC178Q5BJE1 AC099522.1-202ENST00000514718 367 ntBASIC5□□□□□ -1.61
CCDC178Q5BJE1 AC104986.1-201ENST00000517978 436 ntBASIC5□□□□□ -1.61
CCDC178Q5BJE1 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC5□□□□□ -1.61
CCDC178Q5BJE1 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5□□□□□ -1.61
CCDC178Q5BJE1 ZNF705CP-201ENST00000530515 889 ntBASIC5□□□□□ -1.61
CCDC178Q5BJE1 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC5□□□□□ -1.61
CCDC178Q5BJE1 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC5□□□□□ -1.61
CCDC178Q5BJE1 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC5□□□□□ -1.61
CCDC178Q5BJE1 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5□□□□□ -1.61
CCDC178Q5BJE1 AC009977.1-201ENST00000586015 570 ntBASIC5□□□□□ -1.61
CCDC178Q5BJE1 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC5□□□□□ -1.61
CCDC178Q5BJE1 AL161729.3-201ENST00000603533 673 ntBASIC5□□□□□ -1.61
CCDC178Q5BJE1 AL022154.1-201ENST00000604698 785 ntBASIC5□□□□□ -1.61
CCDC178Q5BJE1 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC5□□□□□ -1.61
CCDC178Q5BJE1 AC090948.2-201ENST00000607363 564 ntBASIC5□□□□□ -1.61
CCDC178Q5BJE1 AP001596.2-201ENST00000608410 312 ntBASIC5□□□□□ -1.61
CCDC178Q5BJE1 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CCDC178Q5BJE1 AP001506.1-201ENST00000615444 211 ntBASIC5□□□□□ -1.61
CCDC178Q5BJE1 AC104010.1-201ENST00000616889 150 ntBASIC5□□□□□ -1.61
CCDC178Q5BJE1 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5□□□□□ -1.61
CCDC178Q5BJE1 AL445363.3-201ENST00000623080 671 ntBASIC5□□□□□ -1.61
CCDC178Q5BJE1 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5□□□□□ -1.61
CCDC178Q5BJE1 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC5□□□□□ -1.61
CCDC178Q5BJE1 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5□□□□□ -1.61
CCDC178Q5BJE1 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
CCDC178Q5BJE1 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC178Q5BJE1 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.99□□□□□ -1.61
CCDC178Q5BJE1 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
CCDC178Q5BJE1 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC178Q5BJE1 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC178Q5BJE1 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.99□□□□□ -1.61
CCDC178Q5BJE1 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CCDC178Q5BJE1 RNY4P34-201ENST00000364779 95 ntBASIC4.99□□□□□ -1.61
CCDC178Q5BJE1 Y_RNA.296-201ENST00000364930 108 ntBASIC4.99□□□□□ -1.61
CCDC178Q5BJE1 RNU6-867P-201ENST00000364956 107 ntBASIC4.99□□□□□ -1.61
CCDC178Q5BJE1 AC068538.1-201ENST00000376856 336 ntBASIC4.99□□□□□ -1.61
CCDC178Q5BJE1 SNORD115-47-201ENST00000391226 86 ntBASIC4.99□□□□□ -1.61
CCDC178Q5BJE1 RPL17P50-201ENST00000396131 546 ntBASIC4.99□□□□□ -1.61
CCDC178Q5BJE1 RPL23AP48-201ENST00000406913 488 ntBASIC4.99□□□□□ -1.61
CCDC178Q5BJE1 RPS3AP3-201ENST00000411933 242 ntBASIC4.99□□□□□ -1.61
CCDC178Q5BJE1 AC096632.1-201ENST00000427395 310 ntBASIC4.99□□□□□ -1.61
CCDC178Q5BJE1 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.99□□□□□ -1.61
CCDC178Q5BJE1 RPL23AP46-201ENST00000438548 490 ntBASIC4.99□□□□□ -1.61
CCDC178Q5BJE1 RPL22P17-201ENST00000438729 315 ntBASIC4.99□□□□□ -1.61
CCDC178Q5BJE1 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.99□□□□□ -1.61
CCDC178Q5BJE1 DNAJC19P4-201ENST00000440115 345 ntBASIC4.99□□□□□ -1.61
CCDC178Q5BJE1 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.99□□□□□ -1.61
CCDC178Q5BJE1 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.99□□□□□ -1.61
CCDC178Q5BJE1 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC178Q5BJE1 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC178Q5BJE1 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC4.99□□□□□ -1.61
CCDC178Q5BJE1 AC004924.1-201ENST00000480160 781 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms