Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PDS5AQ29RF7 AC006504.1-201ENST00000562493 3666 ntBASIC4.14□□□□□ -1.75
PDS5AQ29RF7 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PDS5AQ29RF7 AC095050.2-201ENST00000510748 1458 ntBASIC4.13□□□□□ -1.75
PDS5AQ29RF7 OTUD4P1-201ENST00000237841 3067 ntBASIC4.13□□□□□ -1.75
PDS5AQ29RF7 Z83843.1-201ENST00000604070 3685 ntBASIC4.13□□□□□ -1.75
PDS5AQ29RF7 AL049737.1-201ENST00000413920 1403 ntBASIC4.13□□□□□ -1.75
PDS5AQ29RF7 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PDS5AQ29RF7 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
PDS5AQ29RF7 SGO1P2-201ENST00000429458 1589 ntBASIC4.13□□□□□ -1.75
PDS5AQ29RF7 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PDS5AQ29RF7 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
PDS5AQ29RF7 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.13□□□□□ -1.75
PDS5AQ29RF7 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
PDS5AQ29RF7 RNU6-1300P-201ENST00000391046 108 ntBASIC4.13□□□□□ -1.75
PDS5AQ29RF7 AL391417.1-201ENST00000404100 426 ntBASIC4.13□□□□□ -1.75
PDS5AQ29RF7 NCSTNP1-201ENST00000406229 144 ntBASIC4.13□□□□□ -1.75
PDS5AQ29RF7 RNU6-757P-201ENST00000410334 100 ntBASIC4.13□□□□□ -1.75
PDS5AQ29RF7 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.13□□□□□ -1.75
PDS5AQ29RF7 TEX41-202ENST00000414256 604 ntTSL 5 BASIC4.13□□□□□ -1.75
PDS5AQ29RF7 AC002075.2-201ENST00000425207 252 ntBASIC4.13□□□□□ -1.75
PDS5AQ29RF7 AL390023.1-201ENST00000428836 262 ntBASIC4.13□□□□□ -1.75
PDS5AQ29RF7 AL445567.1-201ENST00000439121 144 ntBASIC4.13□□□□□ -1.75
PDS5AQ29RF7 MTND3P1-201ENST00000441336 220 ntBASIC4.13□□□□□ -1.75
PDS5AQ29RF7 AC004865.1-201ENST00000442276 1003 ntBASIC4.13□□□□□ -1.75
PDS5AQ29RF7 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC4.13□□□□□ -1.75
PDS5AQ29RF7 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC4.13□□□□□ -1.75
PDS5AQ29RF7 AC104689.1-201ENST00000473356 768 ntBASIC4.13□□□□□ -1.75
PDS5AQ29RF7 RPL7P18-201ENST00000478965 734 ntBASIC4.13□□□□□ -1.75
PDS5AQ29RF7 AC092045.1-201ENST00000495716 1231 ntBASIC4.13□□□□□ -1.75
PDS5AQ29RF7 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC4.13□□□□□ -1.75
PDS5AQ29RF7 MTND1P22-201ENST00000510572 951 ntBASIC4.13□□□□□ -1.75
PDS5AQ29RF7 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.13□□□□□ -1.75
PDS5AQ29RF7 RNU6-1225P-201ENST00000516336 65 ntBASIC4.13□□□□□ -1.75
PDS5AQ29RF7 IGKV2D-23-201ENST00000518179 286 ntBASIC4.13□□□□□ -1.75
PDS5AQ29RF7 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.13□□□□□ -1.75
PDS5AQ29RF7 CA1-215ENST00000522389 551 ntTSL 3 BASIC4.13□□□□□ -1.75
PDS5AQ29RF7 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC4.13□□□□□ -1.75
PDS5AQ29RF7 AC087373.1-201ENST00000524920 491 ntBASIC4.13□□□□□ -1.75
PDS5AQ29RF7 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC4.13□□□□□ -1.75
PDS5AQ29RF7 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC4.13□□□□□ -1.75
PDS5AQ29RF7 ELOCP32-201ENST00000548625 324 ntBASIC4.13□□□□□ -1.75
PDS5AQ29RF7 AC005476.1-201ENST00000554427 397 ntBASIC4.13□□□□□ -1.75
PDS5AQ29RF7 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.13□□□□□ -1.75
PDS5AQ29RF7 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.13□□□□□ -1.75
PDS5AQ29RF7 MIR4999-201ENST00000585029 91 ntBASIC4.13□□□□□ -1.75
PDS5AQ29RF7 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.13□□□□□ -1.75
PDS5AQ29RF7 AL031281.1-201ENST00000604049 488 ntBASIC4.13□□□□□ -1.75
PDS5AQ29RF7 uc_338.32-201ENST00000615087 172 ntBASIC4.13□□□□□ -1.75
PDS5AQ29RF7 MIR8058-201ENST00000615737 89 ntBASIC4.13□□□□□ -1.75
PDS5AQ29RF7 AC116563.2-201ENST00000624751 535 ntBASIC4.13□□□□□ -1.75
PDS5AQ29RF7 HSPA8P1-201ENST00000425843 1833 ntBASIC4.13□□□□□ -1.75
PDS5AQ29RF7 AL353743.4-201ENST00000422653 1547 ntBASIC4.13□□□□□ -1.75
PDS5AQ29RF7 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PDS5AQ29RF7 Z99496.1-201ENST00000469424 1477 ntBASIC4.13□□□□□ -1.75
PDS5AQ29RF7 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PDS5AQ29RF7 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
PDS5AQ29RF7 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
PDS5AQ29RF7 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
PDS5AQ29RF7 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.12□□□□□ -1.75
PDS5AQ29RF7 ZNF542P-204ENST00000482727 1305 ntBASIC4.12□□□□□ -1.75
PDS5AQ29RF7 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
PDS5AQ29RF7 RNU6-1151P-201ENST00000384684 107 ntBASIC4.12□□□□□ -1.75
PDS5AQ29RF7 U3.19-201ENST00000390893 196 ntBASIC4.12□□□□□ -1.75
PDS5AQ29RF7 Z98941.1-201ENST00000407764 100 ntBASIC4.12□□□□□ -1.75
PDS5AQ29RF7 AL161449.1-201ENST00000414531 1199 ntBASIC4.12□□□□□ -1.75
PDS5AQ29RF7 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.12□□□□□ -1.75
PDS5AQ29RF7 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.12□□□□□ -1.75
PDS5AQ29RF7 OR1AA1P-201ENST00000419597 916 ntBASIC4.12□□□□□ -1.75
PDS5AQ29RF7 USP9YP26-201ENST00000421008 661 ntBASIC4.12□□□□□ -1.75
PDS5AQ29RF7 AC011233.1-201ENST00000422812 283 ntBASIC4.12□□□□□ -1.75
PDS5AQ29RF7 AL593851.1-201ENST00000426171 157 ntBASIC4.12□□□□□ -1.75
PDS5AQ29RF7 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC4.12□□□□□ -1.75
PDS5AQ29RF7 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC4.12□□□□□ -1.75
PDS5AQ29RF7 KATNBL1P3-201ENST00000443475 909 ntBASIC4.12□□□□□ -1.75
PDS5AQ29RF7 AL357552.1-201ENST00000445254 415 ntBASIC4.12□□□□□ -1.75
PDS5AQ29RF7 AL606662.1-201ENST00000445763 553 ntBASIC4.12□□□□□ -1.75
PDS5AQ29RF7 RPL7P59-201ENST00000447700 943 ntBASIC4.12□□□□□ -1.75
PDS5AQ29RF7 AL109741.2-201ENST00000455561 343 ntBASIC4.12□□□□□ -1.75
PDS5AQ29RF7 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC4.12□□□□□ -1.75
PDS5AQ29RF7 BTF3P5-201ENST00000457252 467 ntBASIC4.12□□□□□ -1.75
PDS5AQ29RF7 ACTG1P13-201ENST00000486987 1043 ntBASIC4.12□□□□□ -1.75
PDS5AQ29RF7 RPF2P2-201ENST00000504693 896 ntBASIC4.12□□□□□ -1.75
PDS5AQ29RF7 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.12□□□□□ -1.75
PDS5AQ29RF7 AC021146.8-201ENST00000507455 733 ntBASIC4.12□□□□□ -1.75
PDS5AQ29RF7 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PDS5AQ29RF7 AC109471.1-201ENST00000511631 612 ntBASIC4.12□□□□□ -1.75
PDS5AQ29RF7 AC109445.1-201ENST00000512356 383 ntBASIC4.12□□□□□ -1.75
PDS5AQ29RF7 RN7SKP31-201ENST00000516354 278 ntBASIC4.12□□□□□ -1.75
PDS5AQ29RF7 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.12□□□□□ -1.75
PDS5AQ29RF7 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PDS5AQ29RF7 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.12□□□□□ -1.75
PDS5AQ29RF7 OR4R3P-201ENST00000525084 838 ntBASIC4.12□□□□□ -1.75
PDS5AQ29RF7 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PDS5AQ29RF7 OR5AP1P-201ENST00000529730 940 ntBASIC4.12□□□□□ -1.75
PDS5AQ29RF7 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC4.12□□□□□ -1.75
PDS5AQ29RF7 AL356057.1-201ENST00000533798 831 ntBASIC4.12□□□□□ -1.75
PDS5AQ29RF7 CBX3P5-201ENST00000552017 521 ntBASIC4.12□□□□□ -1.75
PDS5AQ29RF7 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.12□□□□□ -1.75
PDS5AQ29RF7 AC090888.1-201ENST00000561335 1141 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms