Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.43□□□□□ -1.7
DDR1Q08345 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
DDR1Q08345 MTND5P28-201ENST00000438005 1594 ntBASIC4.43□□□□□ -1.7
DDR1Q08345 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.43□□□□□ -1.7
DDR1Q08345 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
DDR1Q08345 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
DDR1Q08345 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.43□□□□□ -1.7
DDR1Q08345 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
DDR1Q08345 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
DDR1Q08345 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.42□□□□□ -1.7
DDR1Q08345 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
DDR1Q08345 MTND4P5-201ENST00000435821 1374 ntBASIC4.42□□□□□ -1.7
DDR1Q08345 DDX43P2-201ENST00000604753 1354 ntBASIC4.42□□□□□ -1.7
DDR1Q08345 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
DDR1Q08345 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
DDR1Q08345 AL590084.1-201ENST00000407885 387 ntBASIC4.42□□□□□ -1.7
DDR1Q08345 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC4.42□□□□□ -1.7
DDR1Q08345 HMGB3P20-201ENST00000417997 600 ntBASIC4.42□□□□□ -1.7
DDR1Q08345 AC104454.1-201ENST00000421341 1401 ntBASIC4.42□□□□□ -1.7
DDR1Q08345 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.42□□□□□ -1.7
DDR1Q08345 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC4.42□□□□□ -1.7
DDR1Q08345 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.42□□□□□ -1.7
DDR1Q08345 THAP5P1-201ENST00000439089 262 ntBASIC4.42□□□□□ -1.7
DDR1Q08345 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
DDR1Q08345 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC4.42□□□□□ -1.7
DDR1Q08345 RPS26P30-201ENST00000443431 335 ntBASIC4.42□□□□□ -1.7
DDR1Q08345 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC4.42□□□□□ -1.7
DDR1Q08345 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.42□□□□□ -1.7
DDR1Q08345 RSL24D1P3-201ENST00000449255 495 ntBASIC4.42□□□□□ -1.7
DDR1Q08345 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.42□□□□□ -1.7
DDR1Q08345 AP001992.1-205ENST00000462248 379 ntBASIC4.42□□□□□ -1.7
DDR1Q08345 AC146507.1-201ENST00000468335 354 ntBASIC4.42□□□□□ -1.7
DDR1Q08345 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC4.42□□□□□ -1.7
DDR1Q08345 SNX5P1-201ENST00000505757 1041 ntBASIC4.42□□□□□ -1.7
DDR1Q08345 RN7SKP234-201ENST00000517173 224 ntBASIC4.42□□□□□ -1.7
DDR1Q08345 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
DDR1Q08345 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
DDR1Q08345 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4.42□□□□□ -1.7
DDR1Q08345 HIGD1AP6-201ENST00000521833 279 ntBASIC4.42□□□□□ -1.7
DDR1Q08345 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC4.42□□□□□ -1.7
DDR1Q08345 TRAV15-201ENST00000556680 249 ntBASIC4.42□□□□□ -1.7
DDR1Q08345 MIR5004-201ENST00000579078 107 ntBASIC4.42□□□□□ -1.7
DDR1Q08345 AP001180.3-201ENST00000582221 145 ntBASIC4.42□□□□□ -1.7
DDR1Q08345 AC022069.1-201ENST00000582910 658 ntBASIC4.42□□□□□ -1.7
DDR1Q08345 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.42□□□□□ -1.7
DDR1Q08345 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.42□□□□□ -1.7
DDR1Q08345 AC128687.2-201ENST00000609657 566 ntBASIC4.42□□□□□ -1.7
DDR1Q08345 MIR486-1-201ENST00000612171 68 ntBASIC4.42□□□□□ -1.7
DDR1Q08345 AC006386.2-201ENST00000624491 75 ntBASIC4.42□□□□□ -1.7
DDR1Q08345 AC012005.1-201ENST00000624575 75 ntBASIC4.42□□□□□ -1.7
DDR1Q08345 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
DDR1Q08345 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
DDR1Q08345 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
DDR1Q08345 AC000367.1-201ENST00000452711 1766 ntBASIC4.42□□□□□ -1.7
DDR1Q08345 RPS4XP5-202ENST00000449995 1334 ntBASIC4.42□□□□□ -1.7
DDR1Q08345 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
DDR1Q08345 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
DDR1Q08345 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
DDR1Q08345 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
DDR1Q08345 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
DDR1Q08345 IPO8P1-201ENST00000455509 3109 ntBASIC4.41□□□□□ -1.7
DDR1Q08345 AC107081.3-201ENST00000612715 2034 ntBASIC4.41□□□□□ -1.7
DDR1Q08345 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
DDR1Q08345 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
DDR1Q08345 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
DDR1Q08345 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
DDR1Q08345 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
DDR1Q08345 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
DDR1Q08345 snoZ40.1-201ENST00000364540 72 ntBASIC4.41□□□□□ -1.7
DDR1Q08345 U3.15-201ENST00000365398 212 ntBASIC4.41□□□□□ -1.7
DDR1Q08345 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC4.41□□□□□ -1.7
DDR1Q08345 RNU6-413P-201ENST00000384115 107 ntBASIC4.41□□□□□ -1.7
DDR1Q08345 RSL24D1P4-201ENST00000400938 484 ntBASIC4.41□□□□□ -1.7
DDR1Q08345 SFR1P1-201ENST00000403720 688 ntBASIC4.41□□□□□ -1.7
DDR1Q08345 RN7SKP53-201ENST00000411337 315 ntBASIC4.41□□□□□ -1.7
DDR1Q08345 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.41□□□□□ -1.7
DDR1Q08345 RPS15AP40-201ENST00000419621 391 ntBASIC4.41□□□□□ -1.7
DDR1Q08345 MTND2P18-201ENST00000419962 1030 ntBASIC4.41□□□□□ -1.7
DDR1Q08345 BX119904.4-201ENST00000424402 301 ntBASIC4.41□□□□□ -1.7
DDR1Q08345 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC4.41□□□□□ -1.7
DDR1Q08345 AL009174.1-201ENST00000426577 416 ntBASIC4.41□□□□□ -1.7
DDR1Q08345 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.41□□□□□ -1.7
DDR1Q08345 AL513175.1-201ENST00000431492 780 ntBASIC4.41□□□□□ -1.7
DDR1Q08345 HMGB1P45-201ENST00000435986 653 ntBASIC4.41□□□□□ -1.7
DDR1Q08345 COX7BP2-201ENST00000437976 242 ntBASIC4.41□□□□□ -1.7
DDR1Q08345 AL008629.1-201ENST00000438615 184 ntBASIC4.41□□□□□ -1.7
DDR1Q08345 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.41□□□□□ -1.7
DDR1Q08345 MTND1P27-201ENST00000451117 902 ntBASIC4.41□□□□□ -1.7
DDR1Q08345 NPM1P13-201ENST00000452663 865 ntBASIC4.41□□□□□ -1.7
DDR1Q08345 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.41□□□□□ -1.7
DDR1Q08345 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.41□□□□□ -1.7
DDR1Q08345 RPS3AP14-201ENST00000483907 780 ntBASIC4.41□□□□□ -1.7
DDR1Q08345 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.41□□□□□ -1.7
DDR1Q08345 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.41□□□□□ -1.7
DDR1Q08345 AC023141.12-201ENST00000512399 199 ntBASIC4.41□□□□□ -1.7
DDR1Q08345 SNORA3.4-201ENST00000515969 96 ntBASIC4.41□□□□□ -1.7
DDR1Q08345 AF279873.1-201ENST00000523393 313 ntBASIC4.41□□□□□ -1.7
DDR1Q08345 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC4.41□□□□□ -1.7
DDR1Q08345 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.41□□□□□ -1.7
DDR1Q08345 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 134.8 ms