Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.53□□□□□ -1.84
SRP54P61011 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.53□□□□□ -1.84
SRP54P61011 snoU109.4-201ENST00000458953 143 ntBASIC3.53□□□□□ -1.84
SRP54P61011 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.53□□□□□ -1.84
SRP54P61011 HMGB3P15-201ENST00000507326 574 ntBASIC3.53□□□□□ -1.84
SRP54P61011 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC3.53□□□□□ -1.84
SRP54P61011 RN7SKP289-201ENST00000517244 295 ntBASIC3.53□□□□□ -1.84
SRP54P61011 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.53□□□□□ -1.84
SRP54P61011 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC3.53□□□□□ -1.84
SRP54P61011 EEF1B2P4-201ENST00000551398 348 ntBASIC3.53□□□□□ -1.84
SRP54P61011 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.53□□□□□ -1.84
SRP54P61011 AL133457.1-201ENST00000564251 987 ntBASIC3.53□□□□□ -1.84
SRP54P61011 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC3.53□□□□□ -1.84
SRP54P61011 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.53□□□□□ -1.84
SRP54P61011 AL390838.2-201ENST00000602394 274 ntBASIC3.53□□□□□ -1.84
SRP54P61011 AC006077.1-201ENST00000604746 343 ntBASIC3.53□□□□□ -1.84
SRP54P61011 AC007179.3-201ENST00000604976 235 ntBASIC3.53□□□□□ -1.84
SRP54P61011 AL365503.1-201ENST00000605247 905 ntBASIC3.53□□□□□ -1.84
SRP54P61011 AC005014.3-201ENST00000605985 190 ntBASIC3.53□□□□□ -1.84
SRP54P61011 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC3.53□□□□□ -1.84
SRP54P61011 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.53□□□□□ -1.84
SRP54P61011 AC092650.2-201ENST00000619984 902 ntBASIC3.53□□□□□ -1.84
SRP54P61011 OR1S1-201ENST00000624470 978 ntBASIC3.53□□□□□ -1.84
SRP54P61011 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.53□□□□□ -1.84
SRP54P61011 AC013437.2-201ENST00000639587 677 ntBASIC3.53□□□□□ -1.84
SRP54P61011 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SRP54P61011 MTCO1P23-201ENST00000415223 1526 ntBASIC3.53□□□□□ -1.84
SRP54P61011 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SRP54P61011 AP005901.5-201ENST00000545779 1796 ntBASIC3.53□□□□□ -1.84
SRP54P61011 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SRP54P61011 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.53□□□□□ -1.84
SRP54P61011 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.53□□□□□ -1.85
SRP54P61011 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.53□□□□□ -1.85
SRP54P61011 AC005183.1-201ENST00000603687 1979 ntBASIC3.52□□□□□ -1.85
SRP54P61011 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.52□□□□□ -1.85
SRP54P61011 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.52□□□□□ -1.85
SRP54P61011 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SRP54P61011 AC016769.3-201ENST00000396562 315 ntBASIC3.52□□□□□ -1.85
SRP54P61011 RPL23AP47-201ENST00000408017 460 ntBASIC3.52□□□□□ -1.85
SRP54P61011 DBIP2-201ENST00000419076 262 ntBASIC3.52□□□□□ -1.85
SRP54P61011 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.52□□□□□ -1.85
SRP54P61011 AP000907.1-201ENST00000428428 510 ntBASIC3.52□□□□□ -1.85
SRP54P61011 GTF2IP3-201ENST00000433887 494 ntBASIC3.52□□□□□ -1.85
SRP54P61011 USP9YP22-201ENST00000438971 294 ntBASIC3.52□□□□□ -1.85
SRP54P61011 AL662791.1-201ENST00000441992 928 ntBASIC3.52□□□□□ -1.85
SRP54P61011 WBP1LP4-201ENST00000505043 344 ntBASIC3.52□□□□□ -1.85
SRP54P61011 AC074250.1-201ENST00000511117 192 ntBASIC3.52□□□□□ -1.85
SRP54P61011 AC093752.1-206ENST00000511823 336 ntBASIC3.52□□□□□ -1.85
SRP54P61011 ARL2BPP6-201ENST00000512757 439 ntBASIC3.52□□□□□ -1.85
SRP54P61011 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.52□□□□□ -1.85
SRP54P61011 RNU6-1261P-201ENST00000517194 104 ntBASIC3.52□□□□□ -1.85
SRP54P61011 AC007458.1-201ENST00000542812 373 ntBASIC3.52□□□□□ -1.85
SRP54P61011 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SRP54P61011 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.52□□□□□ -1.85
SRP54P61011 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SRP54P61011 MIR3912-201ENST00000577566 105 ntBASIC3.52□□□□□ -1.85
SRP54P61011 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.52□□□□□ -1.85
SRP54P61011 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.52□□□□□ -1.85
SRP54P61011 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.52□□□□□ -1.85
SRP54P61011 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.52□□□□□ -1.85
SRP54P61011 XIAPP1-201ENST00000603162 600 ntBASIC3.52□□□□□ -1.85
SRP54P61011 RPL23AP92-201ENST00000603609 255 ntBASIC3.52□□□□□ -1.85
SRP54P61011 AP001521.1-201ENST00000609150 300 ntBASIC3.52□□□□□ -1.85
SRP54P61011 AC018816.2-201ENST00000621460 353 ntBASIC3.52□□□□□ -1.85
SRP54P61011 AC004808.1-201ENST00000627671 721 ntBASIC3.52□□□□□ -1.85
SRP54P61011 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SRP54P61011 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SRP54P61011 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SRP54P61011 AL049781.1-201ENST00000623195 3585 ntBASIC3.52□□□□□ -1.85
SRP54P61011 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
SRP54P61011 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.52□□□□□ -1.85
SRP54P61011 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.51□□□□□ -1.85
SRP54P61011 AL049780.3-201ENST00000624612 1583 ntBASIC3.51□□□□□ -1.85
SRP54P61011 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
SRP54P61011 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SRP54P61011 Y_RNA.25-201ENST00000362528 102 ntBASIC3.51□□□□□ -1.85
SRP54P61011 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.51□□□□□ -1.85
SRP54P61011 MIR490-201ENST00000384865 128 ntBASIC3.51□□□□□ -1.85
SRP54P61011 ARF4P3-201ENST00000397387 509 ntBASIC3.51□□□□□ -1.85
SRP54P61011 AL355143.1-201ENST00000407101 841 ntBASIC3.51□□□□□ -1.85
SRP54P61011 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.51□□□□□ -1.85
SRP54P61011 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.51□□□□□ -1.85
SRP54P61011 AC017079.2-201ENST00000416102 485 ntBASIC3.51□□□□□ -1.85
SRP54P61011 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.51□□□□□ -1.85
SRP54P61011 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.51□□□□□ -1.85
SRP54P61011 RNF2P1-201ENST00000442955 1010 ntBASIC3.51□□□□□ -1.85
SRP54P61011 RPL7P52-201ENST00000449200 742 ntBASIC3.51□□□□□ -1.85
SRP54P61011 AC112492.1-201ENST00000449607 712 ntBASIC3.51□□□□□ -1.85
SRP54P61011 RBMY2UP-201ENST00000453474 324 ntBASIC3.51□□□□□ -1.85
SRP54P61011 AL445669.2-201ENST00000454425 421 ntBASIC3.51□□□□□ -1.85
SRP54P61011 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.51□□□□□ -1.85
SRP54P61011 HMGB1P25-201ENST00000468402 607 ntBASIC3.51□□□□□ -1.85
SRP54P61011 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.51□□□□□ -1.85
SRP54P61011 MTCYBP16-201ENST00000509187 1129 ntBASIC3.51□□□□□ -1.85
SRP54P61011 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.51□□□□□ -1.85
SRP54P61011 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.51□□□□□ -1.85
SRP54P61011 AC125611.1-201ENST00000549563 229 ntBASIC3.51□□□□□ -1.85
SRP54P61011 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.51□□□□□ -1.85
SRP54P61011 GTF2IP8-201ENST00000560687 584 ntBASIC3.51□□□□□ -1.85
SRP54P61011 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms