Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC5.25□□□□□ -1.57
ERVFC1P60507 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.25□□□□□ -1.57
ERVFC1P60507 HMGB1P4-201ENST00000455362 567 ntBASIC5.25□□□□□ -1.57
ERVFC1P60507 BX276092.8-201ENST00000455722 250 ntBASIC5.25□□□□□ -1.57
ERVFC1P60507 RPL37P3-201ENST00000456825 293 ntBASIC5.25□□□□□ -1.57
ERVFC1P60507 PPP1R2P5-201ENST00000457256 603 ntBASIC5.25□□□□□ -1.57
ERVFC1P60507 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.25□□□□□ -1.57
ERVFC1P60507 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.25□□□□□ -1.57
ERVFC1P60507 TMEM251P1-201ENST00000503717 318 ntBASIC5.25□□□□□ -1.57
ERVFC1P60507 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.25□□□□□ -1.57
ERVFC1P60507 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC5.25□□□□□ -1.57
ERVFC1P60507 HMGB3P15-201ENST00000507326 574 ntBASIC5.25□□□□□ -1.57
ERVFC1P60507 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
ERVFC1P60507 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
ERVFC1P60507 AC105417.1-201ENST00000514691 285 ntBASIC5.25□□□□□ -1.57
ERVFC1P60507 IGKV2-36-201ENST00000519999 223 ntBASIC5.25□□□□□ -1.57
ERVFC1P60507 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC5.25□□□□□ -1.57
ERVFC1P60507 AC022616.3-201ENST00000523940 148 ntBASIC5.25□□□□□ -1.57
ERVFC1P60507 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.25□□□□□ -1.57
ERVFC1P60507 AC123904.2-201ENST00000548059 300 ntBASIC5.25□□□□□ -1.57
ERVFC1P60507 AC026464.5-201ENST00000562497 722 ntBASIC5.25□□□□□ -1.57
ERVFC1P60507 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.25□□□□□ -1.57
ERVFC1P60507 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC5.25□□□□□ -1.57
ERVFC1P60507 MIR4277-201ENST00000578298 84 ntBASIC5.25□□□□□ -1.57
ERVFC1P60507 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
ERVFC1P60507 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.25□□□□□ -1.57
ERVFC1P60507 AL590392.1-201ENST00000604960 446 ntBASIC5.25□□□□□ -1.57
ERVFC1P60507 AC010680.4-201ENST00000605334 543 ntBASIC5.25□□□□□ -1.57
ERVFC1P60507 AC121334.2-201ENST00000605387 271 ntBASIC5.25□□□□□ -1.57
ERVFC1P60507 AC080078.3-201ENST00000605407 463 ntBASIC5.25□□□□□ -1.57
ERVFC1P60507 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.25□□□□□ -1.57
ERVFC1P60507 AC009237.17-201ENST00000618111 748 ntBASIC5.25□□□□□ -1.57
ERVFC1P60507 AC091953.2-201ENST00000623979 160 ntBASIC5.25□□□□□ -1.57
ERVFC1P60507 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC5.25□□□□□ -1.57
ERVFC1P60507 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.25□□□□□ -1.57
ERVFC1P60507 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.25□□□□□ -1.57
ERVFC1P60507 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
ERVFC1P60507 USP9YP4-201ENST00000424401 1745 ntBASIC5.25□□□□□ -1.57
ERVFC1P60507 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.25□□□□□ -1.57
ERVFC1P60507 CASC19-204ENST00000641001 2055 ntBASIC5.25□□□□□ -1.57
ERVFC1P60507 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.25□□□□□ -1.57
ERVFC1P60507 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
ERVFC1P60507 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC5.25□□□□□ -1.57
ERVFC1P60507 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.25□□□□□ -1.57
ERVFC1P60507 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
ERVFC1P60507 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
ERVFC1P60507 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
ERVFC1P60507 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
ERVFC1P60507 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.24□□□□□ -1.57
ERVFC1P60507 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
ERVFC1P60507 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
ERVFC1P60507 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
ERVFC1P60507 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
ERVFC1P60507 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
ERVFC1P60507 Y_RNA.100-201ENST00000363141 102 ntBASIC5.24□□□□□ -1.57
ERVFC1P60507 RN7SKP44-201ENST00000363602 316 ntBASIC5.24□□□□□ -1.57
ERVFC1P60507 RNU6-1318P-201ENST00000365389 103 ntBASIC5.24□□□□□ -1.57
ERVFC1P60507 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
ERVFC1P60507 SNORA22B-201ENST00000383876 138 ntBASIC5.24□□□□□ -1.57
ERVFC1P60507 MT-TR-201ENST00000387439 65 ntBASIC5.24□□□□□ -1.57
ERVFC1P60507 AL356057.3-201ENST00000402607 340 ntBASIC5.24□□□□□ -1.57
ERVFC1P60507 RNU2-9P-201ENST00000410194 145 ntBASIC5.24□□□□□ -1.57
ERVFC1P60507 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC5.24□□□□□ -1.57
ERVFC1P60507 AL451054.2-201ENST00000420896 202 ntBASIC5.24□□□□□ -1.57
ERVFC1P60507 CHIAP3-201ENST00000423668 1133 ntBASIC5.24□□□□□ -1.57
ERVFC1P60507 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.24□□□□□ -1.57
ERVFC1P60507 RPL7AP49-201ENST00000429522 581 ntBASIC5.24□□□□□ -1.57
ERVFC1P60507 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.24□□□□□ -1.57
ERVFC1P60507 AL591438.1-201ENST00000433508 581 ntBASIC5.24□□□□□ -1.57
ERVFC1P60507 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.24□□□□□ -1.57
ERVFC1P60507 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC5.24□□□□□ -1.57
ERVFC1P60507 DDX3P2-201ENST00000446138 111 ntBASIC5.24□□□□□ -1.57
ERVFC1P60507 AC090804.1-201ENST00000448870 490 ntBASIC5.24□□□□□ -1.57
ERVFC1P60507 AC026410.2-201ENST00000460281 156 ntBASIC5.24□□□□□ -1.57
ERVFC1P60507 AC007547.1-201ENST00000462177 490 ntBASIC5.24□□□□□ -1.57
ERVFC1P60507 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC5.24□□□□□ -1.57
ERVFC1P60507 AL163973.1-201ENST00000484753 577 ntBASIC5.24□□□□□ -1.57
ERVFC1P60507 AC034222.1-201ENST00000494052 532 ntBASIC5.24□□□□□ -1.57
ERVFC1P60507 RPS4XP18-201ENST00000495480 763 ntBASIC5.24□□□□□ -1.57
ERVFC1P60507 MTCO1P29-201ENST00000496868 288 ntBASIC5.24□□□□□ -1.57
ERVFC1P60507 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC5.24□□□□□ -1.57
ERVFC1P60507 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC5.24□□□□□ -1.57
ERVFC1P60507 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC5.24□□□□□ -1.57
ERVFC1P60507 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC5.24□□□□□ -1.57
ERVFC1P60507 Y_RNA.720-201ENST00000517166 92 ntBASIC5.24□□□□□ -1.57
ERVFC1P60507 OR4R1P-201ENST00000529879 463 ntBASIC5.24□□□□□ -1.57
ERVFC1P60507 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.24□□□□□ -1.57
ERVFC1P60507 TOMM20P2-201ENST00000540082 421 ntBASIC5.24□□□□□ -1.57
ERVFC1P60507 AC068831.4-201ENST00000556118 109 ntBASIC5.24□□□□□ -1.57
ERVFC1P60507 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.24□□□□□ -1.57
ERVFC1P60507 MIR4503-201ENST00000582187 83 ntBASIC5.24□□□□□ -1.57
ERVFC1P60507 MIR7853-201ENST00000584820 132 ntBASIC5.24□□□□□ -1.57
ERVFC1P60507 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC5.24□□□□□ -1.57
ERVFC1P60507 POLR3GP2-201ENST00000588366 668 ntBASIC5.24□□□□□ -1.57
ERVFC1P60507 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.24□□□□□ -1.57
ERVFC1P60507 CYP2C61P-201ENST00000604072 290 ntBASIC5.24□□□□□ -1.57
ERVFC1P60507 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
ERVFC1P60507 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
ERVFC1P60507 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
ERVFC1P60507 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms