Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.15□□□□□ -1.91
LIM2P55344 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.15□□□□□ -1.91
LIM2P55344 SNORA40.2-201ENST00000390847 128 ntBASIC3.15□□□□□ -1.91
LIM2P55344 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
LIM2P55344 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
LIM2P55344 SKINT1L-201ENST00000401057 817 ntBASIC3.15□□□□□ -1.91
LIM2P55344 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.15□□□□□ -1.91
LIM2P55344 MTATP6P20-201ENST00000414147 562 ntBASIC3.15□□□□□ -1.91
LIM2P55344 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.15□□□□□ -1.91
LIM2P55344 AC106883.1-201ENST00000418805 562 ntBASIC3.15□□□□□ -1.91
LIM2P55344 GTF2IP23-201ENST00000423746 351 ntBASIC3.15□□□□□ -1.91
LIM2P55344 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.15□□□□□ -1.91
LIM2P55344 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.15□□□□□ -1.91
LIM2P55344 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.15□□□□□ -1.91
LIM2P55344 AL358232.1-201ENST00000448030 501 ntBASIC3.15□□□□□ -1.91
LIM2P55344 HMGN1P18-201ENST00000457642 277 ntBASIC3.15□□□□□ -1.91
LIM2P55344 PLGLA-201ENST00000465668 449 ntBASIC3.15□□□□□ -1.91
LIM2P55344 AC104164.3-201ENST00000467363 1258 ntBASIC3.15□□□□□ -1.91
LIM2P55344 AC007537.2-201ENST00000472093 511 ntBASIC3.15□□□□□ -1.91
LIM2P55344 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.15□□□□□ -1.91
LIM2P55344 AC010374.2-201ENST00000512933 535 ntBASIC3.15□□□□□ -1.91
LIM2P55344 MTCO1P30-201ENST00000515244 580 ntBASIC3.15□□□□□ -1.91
LIM2P55344 SNORA19.3-201ENST00000516165 130 ntBASIC3.15□□□□□ -1.91
LIM2P55344 RNU6-1261P-201ENST00000517194 104 ntBASIC3.15□□□□□ -1.91
LIM2P55344 AC087808.1-201ENST00000520501 361 ntBASIC3.15□□□□□ -1.91
LIM2P55344 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.15□□□□□ -1.91
LIM2P55344 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.15□□□□□ -1.91
LIM2P55344 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
LIM2P55344 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.15□□□□□ -1.91
LIM2P55344 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.15□□□□□ -1.91
LIM2P55344 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.15□□□□□ -1.91
LIM2P55344 MIR4644-201ENST00000579929 84 ntBASIC3.15□□□□□ -1.91
LIM2P55344 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.15□□□□□ -1.91
LIM2P55344 AL669831.4-202ENST00000590817 238 ntBASIC3.15□□□□□ -1.91
LIM2P55344 AC021749.1-201ENST00000604322 607 ntBASIC3.15□□□□□ -1.91
LIM2P55344 AL159169.3-201ENST00000608871 561 ntBASIC3.15□□□□□ -1.91
LIM2P55344 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.15□□□□□ -1.91
LIM2P55344 MIR7975-201ENST00000619350 68 ntBASIC3.15□□□□□ -1.91
LIM2P55344 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.15□□□□□ -1.91
LIM2P55344 AC012314.7-201ENST00000619693 93 ntBASIC3.15□□□□□ -1.91
LIM2P55344 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.15□□□□□ -1.91
LIM2P55344 AL157700.1-201ENST00000561973 1432 ntBASIC3.15□□□□□ -1.91
LIM2P55344 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
LIM2P55344 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
LIM2P55344 GDI2P1-201ENST00000429312 1336 ntBASIC3.15□□□□□ -1.91
LIM2P55344 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.15□□□□□ -1.91
LIM2P55344 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.14□□□□□ -1.91
LIM2P55344 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.14□□□□□ -1.91
LIM2P55344 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
LIM2P55344 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
LIM2P55344 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.14□□□□□ -1.91
LIM2P55344 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LIM2P55344 SNORA31-201ENST00000362607 130 ntBASIC3.14□□□□□ -1.91
LIM2P55344 RNU6-374P-201ENST00000364146 108 ntBASIC3.14□□□□□ -1.91
LIM2P55344 SNORA7.2-201ENST00000364446 145 ntBASIC3.14□□□□□ -1.91
LIM2P55344 RNU6-335P-201ENST00000364563 113 ntBASIC3.14□□□□□ -1.91
LIM2P55344 SNORA51.6-201ENST00000384151 125 ntBASIC3.14□□□□□ -1.91
LIM2P55344 OR4K6P-201ENST00000416478 897 ntBASIC3.14□□□□□ -1.91
LIM2P55344 KRR1P1-201ENST00000419430 803 ntBASIC3.14□□□□□ -1.91
LIM2P55344 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.14□□□□□ -1.91
LIM2P55344 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LIM2P55344 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC3.14□□□□□ -1.91
LIM2P55344 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.14□□□□□ -1.91
LIM2P55344 TXNP1-201ENST00000441872 371 ntBASIC3.14□□□□□ -1.91
LIM2P55344 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
LIM2P55344 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.14□□□□□ -1.91
LIM2P55344 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.14□□□□□ -1.91
LIM2P55344 RPL5P24-201ENST00000463742 885 ntBASIC3.14□□□□□ -1.91
LIM2P55344 RPL7P38-201ENST00000488396 739 ntBASIC3.14□□□□□ -1.91
LIM2P55344 NIPA2P2-201ENST00000496376 1083 ntBASIC3.14□□□□□ -1.91
LIM2P55344 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LIM2P55344 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.14□□□□□ -1.91
LIM2P55344 IGKV2D-23-201ENST00000518179 286 ntBASIC3.14□□□□□ -1.91
LIM2P55344 IGKV2D-36-201ENST00000518643 226 ntBASIC3.14□□□□□ -1.91
LIM2P55344 AC104027.1-201ENST00000521887 300 ntBASIC3.14□□□□□ -1.91
LIM2P55344 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.14□□□□□ -1.91
LIM2P55344 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.14□□□□□ -1.91
LIM2P55344 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.14□□□□□ -1.91
LIM2P55344 AC006518.1-201ENST00000541449 943 ntBASIC3.14□□□□□ -1.91
LIM2P55344 AC004024.1-201ENST00000549244 247 ntBASIC3.14□□□□□ -1.91
LIM2P55344 CBX3P5-201ENST00000552017 521 ntBASIC3.14□□□□□ -1.91
LIM2P55344 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.14□□□□□ -1.91
LIM2P55344 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.14□□□□□ -1.91
LIM2P55344 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.14□□□□□ -1.91
LIM2P55344 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.14□□□□□ -1.91
LIM2P55344 RN7SL339P-201ENST00000580597 296 ntBASIC3.14□□□□□ -1.91
LIM2P55344 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.14□□□□□ -1.91
LIM2P55344 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.14□□□□□ -1.91
LIM2P55344 ELOCP35-201ENST00000604289 336 ntBASIC3.14□□□□□ -1.91
LIM2P55344 MIR92B-201ENST00000607575 96 ntBASIC3.14□□□□□ -1.91
LIM2P55344 AC005332.6-201ENST00000613178 446 ntBASIC3.14□□□□□ -1.91
LIM2P55344 AC008083.4-201ENST00000615076 444 ntBASIC3.14□□□□□ -1.91
LIM2P55344 AC090116.1-201ENST00000615679 446 ntBASIC3.14□□□□□ -1.91
LIM2P55344 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.14□□□□□ -1.91
LIM2P55344 AC073968.1-201ENST00000618594 637 ntBASIC3.14□□□□□ -1.91
LIM2P55344 SNORD39.4-201ENST00000620099 78 ntBASIC3.14□□□□□ -1.91
LIM2P55344 AC009318.4-201ENST00000620496 486 ntBASIC3.14□□□□□ -1.91
LIM2P55344 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.14□□□□□ -1.91
LIM2P55344 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.14□□□□□ -1.91
LIM2P55344 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms