Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.6□□□□□ -1.83
CDH11P55287 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.6□□□□□ -1.83
CDH11P55287 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.6□□□□□ -1.83
CDH11P55287 ARPC3P2-201ENST00000457786 533 ntBASIC3.6□□□□□ -1.83
CDH11P55287 AC022034.3-201ENST00000471393 478 ntBASIC3.6□□□□□ -1.83
CDH11P55287 AC007537.2-201ENST00000472093 511 ntBASIC3.6□□□□□ -1.83
CDH11P55287 OR5H5P-201ENST00000503164 928 ntBASIC3.6□□□□□ -1.83
CDH11P55287 AC004069.2-201ENST00000505438 1114 ntBASIC3.6□□□□□ -1.83
CDH11P55287 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.6□□□□□ -1.83
CDH11P55287 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.6□□□□□ -1.83
CDH11P55287 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.6□□□□□ -1.83
CDH11P55287 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.6□□□□□ -1.83
CDH11P55287 MTCO1P49-201ENST00000523429 802 ntBASIC3.6□□□□□ -1.83
CDH11P55287 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.6□□□□□ -1.83
CDH11P55287 AC087276.1-201ENST00000529659 480 ntBASIC3.6□□□□□ -1.83
CDH11P55287 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.6□□□□□ -1.83
CDH11P55287 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.6□□□□□ -1.83
CDH11P55287 AC007954.1-201ENST00000554198 494 ntBASIC3.6□□□□□ -1.83
CDH11P55287 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CDH11P55287 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.6□□□□□ -1.83
CDH11P55287 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.6□□□□□ -1.83
CDH11P55287 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.6□□□□□ -1.83
CDH11P55287 OR4G1P-201ENST00000588632 938 ntBASIC3.6□□□□□ -1.83
CDH11P55287 AC007566.2-201ENST00000603642 413 ntBASIC3.6□□□□□ -1.83
CDH11P55287 AC105429.2-201ENST00000610567 517 ntBASIC3.6□□□□□ -1.83
CDH11P55287 AC009318.4-201ENST00000620496 486 ntBASIC3.6□□□□□ -1.83
CDH11P55287 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.6□□□□□ -1.83
CDH11P55287 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.6□□□□□ -1.83
CDH11P55287 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CDH11P55287 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.6□□□□□ -1.83
CDH11P55287 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CDH11P55287 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.6□□□□□ -1.83
CDH11P55287 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CDH11P55287 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.6□□□□□ -1.83
CDH11P55287 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CDH11P55287 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CDH11P55287 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CDH11P55287 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CDH11P55287 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.59□□□□□ -1.83
CDH11P55287 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CDH11P55287 RLIMP1-201ENST00000339626 1680 ntBASIC3.59□□□□□ -1.83
CDH11P55287 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
CDH11P55287 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CDH11P55287 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
CDH11P55287 RNU6-462P-201ENST00000362659 105 ntBASIC3.59□□□□□ -1.83
CDH11P55287 RNU6-374P-201ENST00000364146 108 ntBASIC3.59□□□□□ -1.83
CDH11P55287 RNA5SP88-201ENST00000365560 109 ntBASIC3.59□□□□□ -1.83
CDH11P55287 AL121972.1-201ENST00000402023 252 ntBASIC3.59□□□□□ -1.83
CDH11P55287 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.59□□□□□ -1.83
CDH11P55287 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.59□□□□□ -1.83
CDH11P55287 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.59□□□□□ -1.83
CDH11P55287 HSFY4P-201ENST00000415994 1181 ntBASIC3.59□□□□□ -1.83
CDH11P55287 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.59□□□□□ -1.83
CDH11P55287 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.59□□□□□ -1.83
CDH11P55287 MTND4P32-201ENST00000437189 1237 ntBASIC3.59□□□□□ -1.83
CDH11P55287 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.59□□□□□ -1.83
CDH11P55287 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.59□□□□□ -1.83
CDH11P55287 AC118469.1-201ENST00000442943 488 ntBASIC3.59□□□□□ -1.83
CDH11P55287 RPS4XP4-201ENST00000443195 763 ntBASIC3.59□□□□□ -1.83
CDH11P55287 RPL21P89-201ENST00000444021 467 ntBASIC3.59□□□□□ -1.83
CDH11P55287 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.59□□□□□ -1.83
CDH11P55287 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.59□□□□□ -1.83
CDH11P55287 RPL38P1-201ENST00000460914 211 ntBASIC3.59□□□□□ -1.83
CDH11P55287 RN7SL93P-201ENST00000463035 293 ntBASIC3.59□□□□□ -1.83
CDH11P55287 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.59□□□□□ -1.83
CDH11P55287 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.59□□□□□ -1.83
CDH11P55287 AC090453.1-201ENST00000495560 436 ntBASIC3.59□□□□□ -1.83
CDH11P55287 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.59□□□□□ -1.83
CDH11P55287 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.59□□□□□ -1.83
CDH11P55287 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.59□□□□□ -1.83
CDH11P55287 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.59□□□□□ -1.83
CDH11P55287 AC026412.2-201ENST00000512270 1075 ntBASIC3.59□□□□□ -1.83
CDH11P55287 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.59□□□□□ -1.83
CDH11P55287 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.59□□□□□ -1.83
CDH11P55287 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.59□□□□□ -1.83
CDH11P55287 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.59□□□□□ -1.83
CDH11P55287 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CDH11P55287 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.59□□□□□ -1.83
CDH11P55287 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.59□□□□□ -1.83
CDH11P55287 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.59□□□□□ -1.83
CDH11P55287 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.59□□□□□ -1.83
CDH11P55287 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.59□□□□□ -1.83
CDH11P55287 AP001180.3-201ENST00000582221 145 ntBASIC3.59□□□□□ -1.83
CDH11P55287 MAGOH2P-202ENST00000584384 429 ntBASIC3.59□□□□□ -1.83
CDH11P55287 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.59□□□□□ -1.83
CDH11P55287 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CDH11P55287 AC009090.3-201ENST00000616553 565 ntBASIC3.59□□□□□ -1.83
CDH11P55287 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.59□□□□□ -1.83
CDH11P55287 AF246928.1-201ENST00000623768 87 ntBASIC3.59□□□□□ -1.83
CDH11P55287 AC007494.3-201ENST00000624660 743 ntBASIC3.59□□□□□ -1.83
CDH11P55287 CYP3A51P-201ENST00000633513 256 ntBASIC3.59□□□□□ -1.83
CDH11P55287 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CDH11P55287 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.59□□□□□ -1.84
CDH11P55287 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CDH11P55287 AC006504.1-201ENST00000562493 3666 ntBASIC3.58□□□□□ -1.84
CDH11P55287 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.58□□□□□ -1.84
CDH11P55287 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.58□□□□□ -1.84
CDH11P55287 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.58□□□□□ -1.84
CDH11P55287 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
CDH11P55287 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 509.3 ms