Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.68□□□□□ -1.5
USP11P51784 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC5.68□□□□□ -1.5
USP11P51784 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.68□□□□□ -1.5
USP11P51784 SNRPEP4-201ENST00000435815 279 ntBASIC5.68□□□□□ -1.5
USP11P51784 CYCSP24-201ENST00000445119 316 ntBASIC5.68□□□□□ -1.5
USP11P51784 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC5.68□□□□□ -1.5
USP11P51784 AL589765.3-201ENST00000446084 462 ntBASIC5.68□□□□□ -1.5
USP11P51784 AC245028.2-201ENST00000458673 253 ntBASIC5.68□□□□□ -1.5
USP11P51784 RPS17P2-201ENST00000461663 408 ntBASIC5.68□□□□□ -1.5
USP11P51784 RPS4XP10-201ENST00000465034 731 ntBASIC5.68□□□□□ -1.5
USP11P51784 AL135752.1-201ENST00000479477 471 ntBASIC5.68□□□□□ -1.5
USP11P51784 RPS23P1-201ENST00000491662 432 ntBASIC5.68□□□□□ -1.5
USP11P51784 AC023424.1-201ENST00000496058 459 ntBASIC5.68□□□□□ -1.5
USP11P51784 AC231760.1-201ENST00000498002 260 ntBASIC5.68□□□□□ -1.5
USP11P51784 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC5.68□□□□□ -1.5
USP11P51784 SCARNA24.1-201ENST00000516465 137 ntBASIC5.68□□□□□ -1.5
USP11P51784 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC5.68□□□□□ -1.5
USP11P51784 AC022634.1-201ENST00000520765 532 ntBASIC5.68□□□□□ -1.5
USP11P51784 AC008033.2-201ENST00000542626 177 ntBASIC5.68□□□□□ -1.5
USP11P51784 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC5.68□□□□□ -1.5
USP11P51784 AC026470.2-201ENST00000561492 181 ntBASIC5.68□□□□□ -1.5
USP11P51784 AC011487.3-201ENST00000593607 453 ntBASIC5.68□□□□□ -1.5
USP11P51784 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.68□□□□□ -1.5
USP11P51784 CTHRC1P1-201ENST00000605383 469 ntBASIC5.68□□□□□ -1.5
USP11P51784 AC121334.2-201ENST00000605387 271 ntBASIC5.68□□□□□ -1.5
USP11P51784 U6.101-201ENST00000637707 76 ntBASIC5.68□□□□□ -1.5
USP11P51784 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC5.68□□□□□ -1.5
USP11P51784 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
USP11P51784 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.68□□□□□ -1.5
USP11P51784 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
USP11P51784 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
USP11P51784 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
USP11P51784 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.67□□□□□ -1.5
USP11P51784 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.67□□□□□ -1.5
USP11P51784 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
USP11P51784 AC105074.1-201ENST00000623380 3095 ntBASIC5.67□□□□□ -1.5
USP11P51784 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
USP11P51784 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
USP11P51784 Y_RNA.28-201ENST00000362554 111 ntBASIC5.67□□□□□ -1.5
USP11P51784 RN7SKP95-201ENST00000362860 303 ntBASIC5.67□□□□□ -1.5
USP11P51784 Y_RNA.339-201ENST00000365325 102 ntBASIC5.67□□□□□ -1.5
USP11P51784 MIR514A2-201ENST00000385131 88 ntBASIC5.67□□□□□ -1.5
USP11P51784 MIR514A3-201ENST00000385132 88 ntBASIC5.67□□□□□ -1.5
USP11P51784 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
USP11P51784 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.67□□□□□ -1.5
USP11P51784 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.67□□□□□ -1.5
USP11P51784 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC5.67□□□□□ -1.5
USP11P51784 ERLEC1P1-201ENST00000433806 578 ntBASIC5.67□□□□□ -1.5
USP11P51784 AL356276.2-201ENST00000435919 558 ntBASIC5.67□□□□□ -1.5
USP11P51784 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC5.67□□□□□ -1.5
USP11P51784 RPL36AP15-201ENST00000444514 266 ntBASIC5.67□□□□□ -1.5
USP11P51784 SLC25A18P1-201ENST00000449385 454 ntBASIC5.67□□□□□ -1.5
USP11P51784 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.67□□□□□ -1.5
USP11P51784 AC026410.2-201ENST00000460281 156 ntBASIC5.67□□□□□ -1.5
USP11P51784 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.67□□□□□ -1.5
USP11P51784 RN7SL826P-201ENST00000479724 288 ntBASIC5.67□□□□□ -1.5
USP11P51784 AC068587.1-201ENST00000483613 781 ntBASIC5.67□□□□□ -1.5
USP11P51784 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.67□□□□□ -1.5
USP11P51784 CCDC34P1-201ENST00000507441 517 ntBASIC5.67□□□□□ -1.5
USP11P51784 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
USP11P51784 Y_RNA.665-201ENST00000516177 98 ntBASIC5.67□□□□□ -1.5
USP11P51784 SUMO2P20-201ENST00000520803 283 ntBASIC5.67□□□□□ -1.5
USP11P51784 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.67□□□□□ -1.5
USP11P51784 AP000676.2-201ENST00000529711 301 ntBASIC5.67□□□□□ -1.5
USP11P51784 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC5.67□□□□□ -1.5
USP11P51784 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.67□□□□□ -1.5
USP11P51784 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.67□□□□□ -1.5
USP11P51784 OR4T1P-201ENST00000554933 911 ntBASIC5.67□□□□□ -1.5
USP11P51784 TVP23CP2-201ENST00000571473 623 ntBASIC5.67□□□□□ -1.5
USP11P51784 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC5.67□□□□□ -1.5
USP11P51784 MIR4700-201ENST00000578311 74 ntBASIC5.67□□□□□ -1.5
USP11P51784 AC098848.2-201ENST00000588023 330 ntBASIC5.67□□□□□ -1.5
USP11P51784 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.67□□□□□ -1.5
USP11P51784 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.67□□□□□ -1.5
USP11P51784 APOOP1-201ENST00000604695 592 ntBASIC5.67□□□□□ -1.5
USP11P51784 AP000654.2-201ENST00000605633 586 ntBASIC5.67□□□□□ -1.5
USP11P51784 uc_338.15-201ENST00000615470 191 ntBASIC5.67□□□□□ -1.5
USP11P51784 BX005214.3-202ENST00000619809 325 ntBASIC5.67□□□□□ -1.5
USP11P51784 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.67□□□□□ -1.5
USP11P51784 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.67□□□□□ -1.5
USP11P51784 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.67□□□□□ -1.5
USP11P51784 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
USP11P51784 AC114546.3-201ENST00000623582 1734 ntBASIC5.67□□□□□ -1.5
USP11P51784 AC092125.1-201ENST00000562568 1995 ntBASIC5.67□□□□□ -1.5
USP11P51784 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
USP11P51784 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
USP11P51784 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
USP11P51784 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
USP11P51784 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
USP11P51784 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.66□□□□□ -1.5
USP11P51784 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC5.66□□□□□ -1.5
USP11P51784 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.66□□□□□ -1.5
USP11P51784 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
USP11P51784 MTND4P1-201ENST00000457501 1466 ntBASIC5.66□□□□□ -1.5
USP11P51784 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
USP11P51784 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
USP11P51784 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
USP11P51784 AC067945.1-201ENST00000342609 618 ntBASIC5.66□□□□□ -1.5
USP11P51784 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
USP11P51784 SNORA70.10-201ENST00000384515 134 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms