Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 SNORA54-201ENST00000384281 123 ntBASIC3.36□□□□□ -1.87
CASP4P49662 RNU6-921P-201ENST00000384361 107 ntBASIC3.36□□□□□ -1.87
CASP4P49662 MIR649-201ENST00000384843 97 ntBASIC3.36□□□□□ -1.87
CASP4P49662 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CASP4P49662 AL121978.1-201ENST00000402778 359 ntBASIC3.36□□□□□ -1.87
CASP4P49662 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.36□□□□□ -1.87
CASP4P49662 AC007899.1-201ENST00000412776 775 ntBASIC3.36□□□□□ -1.87
CASP4P49662 HMGB1P12-201ENST00000438594 598 ntBASIC3.36□□□□□ -1.87
CASP4P49662 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.36□□□□□ -1.87
CASP4P49662 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.36□□□□□ -1.87
CASP4P49662 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.36□□□□□ -1.87
CASP4P49662 snoU13.3-201ENST00000459441 104 ntBASIC3.36□□□□□ -1.87
CASP4P49662 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CASP4P49662 RPS4XP13-201ENST00000483219 789 ntBASIC3.36□□□□□ -1.87
CASP4P49662 IGKV2D-36-201ENST00000518643 226 ntBASIC3.36□□□□□ -1.87
CASP4P49662 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.36□□□□□ -1.87
CASP4P49662 MTCO1P40-201ENST00000574371 625 ntBASIC3.36□□□□□ -1.87
CASP4P49662 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.36□□□□□ -1.87
CASP4P49662 MIR5004-201ENST00000579078 107 ntBASIC3.36□□□□□ -1.87
CASP4P49662 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.36□□□□□ -1.87
CASP4P49662 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC3.36□□□□□ -1.87
CASP4P49662 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.36□□□□□ -1.87
CASP4P49662 DPRXP5-201ENST00000604662 539 ntBASIC3.36□□□□□ -1.87
CASP4P49662 AC006023.2-201ENST00000609916 167 ntBASIC3.36□□□□□ -1.87
CASP4P49662 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CASP4P49662 AC099506.2-201ENST00000623074 221 ntBASIC3.36□□□□□ -1.87
CASP4P49662 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.36□□□□□ -1.87
CASP4P49662 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.36□□□□□ -1.87
CASP4P49662 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CASP4P49662 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CASP4P49662 AC007256.1-201ENST00000392253 2765 ntBASIC3.35□□□□□ -1.87
CASP4P49662 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
CASP4P49662 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CASP4P49662 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CASP4P49662 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CASP4P49662 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.35□□□□□ -1.87
CASP4P49662 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.35□□□□□ -1.87
CASP4P49662 RNU6-619P-201ENST00000365146 108 ntBASIC3.35□□□□□ -1.87
CASP4P49662 RNU6-468P-201ENST00000384003 109 ntBASIC3.35□□□□□ -1.87
CASP4P49662 U6.112-201ENST00000384129 70 ntBASIC3.35□□□□□ -1.87
CASP4P49662 SNORD15B-201ENST00000384714 146 ntBASIC3.35□□□□□ -1.87
CASP4P49662 SNORA46-201ENST00000384762 135 ntBASIC3.35□□□□□ -1.87
CASP4P49662 RPL31P1-201ENST00000398116 372 ntBASIC3.35□□□□□ -1.87
CASP4P49662 GSTA8P-201ENST00000404253 637 ntBASIC3.35□□□□□ -1.87
CASP4P49662 AL138880.1-201ENST00000405824 642 ntBASIC3.35□□□□□ -1.87
CASP4P49662 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.35□□□□□ -1.87
CASP4P49662 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.35□□□□□ -1.87
CASP4P49662 AL512637.2-201ENST00000431287 1256 ntBASIC3.35□□□□□ -1.87
CASP4P49662 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.35□□□□□ -1.87
CASP4P49662 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.35□□□□□ -1.87
CASP4P49662 AL662791.1-201ENST00000441992 928 ntBASIC3.35□□□□□ -1.87
CASP4P49662 AL592437.1-201ENST00000443781 492 ntBASIC3.35□□□□□ -1.87
CASP4P49662 AC004022.1-201ENST00000447766 1066 ntBASIC3.35□□□□□ -1.87
CASP4P49662 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.35□□□□□ -1.87
CASP4P49662 NF1P3-201ENST00000457709 450 ntBASIC3.35□□□□□ -1.87
CASP4P49662 RPL21P104-201ENST00000464143 478 ntBASIC3.35□□□□□ -1.87
CASP4P49662 AC093278.1-201ENST00000494700 600 ntBASIC3.35□□□□□ -1.87
CASP4P49662 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.35□□□□□ -1.87
CASP4P49662 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.35□□□□□ -1.87
CASP4P49662 AC118282.2-201ENST00000508739 374 ntBASIC3.35□□□□□ -1.87
CASP4P49662 AP004371.1-201ENST00000525240 214 ntBASIC3.35□□□□□ -1.87
CASP4P49662 AC010198.2-201ENST00000550612 259 ntBASIC3.35□□□□□ -1.87
CASP4P49662 LSM6P2-201ENST00000552208 177 ntBASIC3.35□□□□□ -1.87
CASP4P49662 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.35□□□□□ -1.87
CASP4P49662 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.35□□□□□ -1.87
CASP4P49662 AC012182.1-201ENST00000570133 895 ntBASIC3.35□□□□□ -1.87
CASP4P49662 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.35□□□□□ -1.87
CASP4P49662 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.35□□□□□ -1.87
CASP4P49662 AC005776.1-201ENST00000603164 290 ntBASIC3.35□□□□□ -1.87
CASP4P49662 AC002487.1-201ENST00000604565 994 ntBASIC3.35□□□□□ -1.87
CASP4P49662 AL450489.1-201ENST00000612071 468 ntBASIC3.35□□□□□ -1.87
CASP4P49662 AL442067.2-201ENST00000614033 363 ntBASIC3.35□□□□□ -1.87
CASP4P49662 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.35□□□□□ -1.87
CASP4P49662 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.35□□□□□ -1.87
CASP4P49662 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CASP4P49662 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.35□□□□□ -1.87
CASP4P49662 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.35□□□□□ -1.87
CASP4P49662 AC116096.1-201ENST00000566804 2314 ntBASIC3.35□□□□□ -1.87
CASP4P49662 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.34□□□□□ -1.87
CASP4P49662 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CASP4P49662 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CASP4P49662 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CASP4P49662 RNU6-600P-201ENST00000362524 99 ntBASIC3.34□□□□□ -1.87
CASP4P49662 SNORA38.1-201ENST00000364172 131 ntBASIC3.34□□□□□ -1.87
CASP4P49662 RNU6-1181P-201ENST00000384191 106 ntBASIC3.34□□□□□ -1.87
CASP4P49662 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.34□□□□□ -1.87
CASP4P49662 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC3.34□□□□□ -1.87
CASP4P49662 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.34□□□□□ -1.87
CASP4P49662 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.34□□□□□ -1.87
CASP4P49662 AC234064.1-201ENST00000436312 247 ntBASIC3.34□□□□□ -1.87
CASP4P49662 SEPT14P24-201ENST00000447236 180 ntBASIC3.34□□□□□ -1.87
CASP4P49662 RPS27P29-201ENST00000463110 252 ntBASIC3.34□□□□□ -1.87
CASP4P49662 RPS17P11-201ENST00000474297 293 ntBASIC3.34□□□□□ -1.87
CASP4P49662 KCTD9P5-201ENST00000504141 1170 ntBASIC3.34□□□□□ -1.87
CASP4P49662 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.34□□□□□ -1.87
CASP4P49662 TXNP6-201ENST00000510190 310 ntBASIC3.34□□□□□ -1.87
CASP4P49662 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.34□□□□□ -1.87
CASP4P49662 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.34□□□□□ -1.87
CASP4P49662 AC245166.1-201ENST00000521012 253 ntBASIC3.34□□□□□ -1.87
CASP4P49662 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms