Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.14□□□□□ -1.91
SLC1A1P43005 MTCO3P44-201ENST00000510977 541 ntBASIC3.14□□□□□ -1.91
SLC1A1P43005 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.14□□□□□ -1.91
SLC1A1P43005 AP001207.1-201ENST00000524051 481 ntBASIC3.14□□□□□ -1.91
SLC1A1P43005 AC109635.4-202ENST00000531666 412 ntBASIC3.14□□□□□ -1.91
SLC1A1P43005 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.14□□□□□ -1.91
SLC1A1P43005 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.14□□□□□ -1.91
SLC1A1P43005 AL157394.1-201ENST00000562983 1224 ntBASIC3.14□□□□□ -1.91
SLC1A1P43005 AC034105.3-201ENST00000565294 442 ntBASIC3.14□□□□□ -1.91
SLC1A1P43005 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.14□□□□□ -1.91
SLC1A1P43005 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.14□□□□□ -1.91
SLC1A1P43005 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.14□□□□□ -1.91
SLC1A1P43005 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.14□□□□□ -1.91
SLC1A1P43005 AC245389.1-201ENST00000605141 529 ntBASIC3.14□□□□□ -1.91
SLC1A1P43005 AP004247.3-201ENST00000608682 624 ntBASIC3.14□□□□□ -1.91
SLC1A1P43005 AL162574.2-201ENST00000614618 657 ntBASIC3.14□□□□□ -1.91
SLC1A1P43005 MIR7112-201ENST00000616126 65 ntBASIC3.14□□□□□ -1.91
SLC1A1P43005 AL445493.3-201ENST00000619568 477 ntBASIC3.14□□□□□ -1.91
SLC1A1P43005 AC020923.1-201ENST00000624021 917 ntBASIC3.14□□□□□ -1.91
SLC1A1P43005 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.14□□□□□ -1.91
SLC1A1P43005 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.14□□□□□ -1.91
SLC1A1P43005 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
SLC1A1P43005 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SLC1A1P43005 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.13□□□□□ -1.91
SLC1A1P43005 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.13□□□□□ -1.91
SLC1A1P43005 AC010733.2-201ENST00000589496 5702 ntBASIC3.13□□□□□ -1.91
SLC1A1P43005 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.13□□□□□ -1.91
SLC1A1P43005 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.13□□□□□ -1.91
SLC1A1P43005 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
SLC1A1P43005 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.13□□□□□ -1.91
SLC1A1P43005 MIR16-2-201ENST00000362117 81 ntBASIC3.13□□□□□ -1.91
SLC1A1P43005 U8.9-201ENST00000365667 134 ntBASIC3.13□□□□□ -1.91
SLC1A1P43005 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.13□□□□□ -1.91
SLC1A1P43005 RNU6-837P-201ENST00000391056 108 ntBASIC3.13□□□□□ -1.91
SLC1A1P43005 ATP5F1P3-201ENST00000397213 657 ntBASIC3.13□□□□□ -1.91
SLC1A1P43005 RPL23AP47-201ENST00000408017 460 ntBASIC3.13□□□□□ -1.91
SLC1A1P43005 RNA5SP56-201ENST00000410277 118 ntBASIC3.13□□□□□ -1.91
SLC1A1P43005 RNA5SP120-201ENST00000410900 112 ntBASIC3.13□□□□□ -1.91
SLC1A1P43005 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.13□□□□□ -1.91
SLC1A1P43005 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.13□□□□□ -1.91
SLC1A1P43005 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.13□□□□□ -1.91
SLC1A1P43005 HMGN2P20-201ENST00000437531 273 ntBASIC3.13□□□□□ -1.91
SLC1A1P43005 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.13□□□□□ -1.91
SLC1A1P43005 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.13□□□□□ -1.91
SLC1A1P43005 AC025768.1-201ENST00000510057 267 ntBASIC3.13□□□□□ -1.91
SLC1A1P43005 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.13□□□□□ -1.91
SLC1A1P43005 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.13□□□□□ -1.91
SLC1A1P43005 OR4A45P-201ENST00000529954 901 ntBASIC3.13□□□□□ -1.91
SLC1A1P43005 AC124293.1-201ENST00000530034 493 ntBASIC3.13□□□□□ -1.91
SLC1A1P43005 AP003385.6-201ENST00000531603 374 ntBASIC3.13□□□□□ -1.91
SLC1A1P43005 SNRPGP1-201ENST00000553864 222 ntBASIC3.13□□□□□ -1.91
SLC1A1P43005 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3.13□□□□□ -1.91
SLC1A1P43005 AC010653.1-201ENST00000571108 881 ntBASIC3.13□□□□□ -1.91
SLC1A1P43005 AL669831.4-202ENST00000590817 238 ntBASIC3.13□□□□□ -1.91
SLC1A1P43005 AL020997.3-201ENST00000602843 359 ntBASIC3.13□□□□□ -1.91
SLC1A1P43005 AC008739.3-201ENST00000603262 127 ntBASIC3.13□□□□□ -1.91
SLC1A1P43005 AC025588.3-201ENST00000604182 274 ntBASIC3.13□□□□□ -1.91
SLC1A1P43005 AC013468.1-201ENST00000608680 598 ntBASIC3.13□□□□□ -1.91
SLC1A1P43005 AC006023.2-201ENST00000609916 167 ntBASIC3.13□□□□□ -1.91
SLC1A1P43005 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SLC1A1P43005 AL590240.3-201ENST00000621416 943 ntBASIC3.13□□□□□ -1.91
SLC1A1P43005 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.13□□□□□ -1.91
SLC1A1P43005 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.13□□□□□ -1.91
SLC1A1P43005 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SLC1A1P43005 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SLC1A1P43005 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.13□□□□□ -1.91
SLC1A1P43005 MTND5P31-201ENST00000419366 1374 ntBASIC3.12□□□□□ -1.91
SLC1A1P43005 AC073055.1-201ENST00000456901 1621 ntBASIC3.12□□□□□ -1.91
SLC1A1P43005 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
SLC1A1P43005 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
SLC1A1P43005 RNU1-85P-201ENST00000364127 164 ntBASIC3.12□□□□□ -1.91
SLC1A1P43005 RNU6-1181P-201ENST00000384191 106 ntBASIC3.12□□□□□ -1.91
SLC1A1P43005 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
SLC1A1P43005 RN7SKP220-201ENST00000410611 288 ntBASIC3.12□□□□□ -1.91
SLC1A1P43005 RNU2-71P-201ENST00000411395 189 ntBASIC3.12□□□□□ -1.91
SLC1A1P43005 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.12□□□□□ -1.91
SLC1A1P43005 AC009237.2-201ENST00000421358 284 ntBASIC3.12□□□□□ -1.91
SLC1A1P43005 AL158156.1-201ENST00000422509 473 ntBASIC3.12□□□□□ -1.91
SLC1A1P43005 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.12□□□□□ -1.91
SLC1A1P43005 ARL4AP4-201ENST00000434170 518 ntBASIC3.12□□□□□ -1.91
SLC1A1P43005 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC3.12□□□□□ -1.91
SLC1A1P43005 RPL7P52-201ENST00000449200 742 ntBASIC3.12□□□□□ -1.91
SLC1A1P43005 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.12□□□□□ -1.91
SLC1A1P43005 RPL21P41-201ENST00000459863 264 ntBASIC3.12□□□□□ -1.91
SLC1A1P43005 RPS27AP1-201ENST00000475545 471 ntBASIC3.12□□□□□ -1.91
SLC1A1P43005 RPS4XP6-201ENST00000477670 797 ntBASIC3.12□□□□□ -1.91
SLC1A1P43005 RPS29P2-201ENST00000479278 136 ntBASIC3.12□□□□□ -1.91
SLC1A1P43005 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.12□□□□□ -1.91
SLC1A1P43005 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
SLC1A1P43005 OR8K4P-201ENST00000534608 872 ntBASIC3.12□□□□□ -1.91
SLC1A1P43005 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SLC1A1P43005 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.12□□□□□ -1.91
SLC1A1P43005 MIR5004-201ENST00000579078 107 ntBASIC3.12□□□□□ -1.91
SLC1A1P43005 AL031985.2-201ENST00000600955 480 ntBASIC3.12□□□□□ -1.91
SLC1A1P43005 AL590282.1-201ENST00000610379 1136 ntBASIC3.12□□□□□ -1.91
SLC1A1P43005 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.12□□□□□ -1.91
SLC1A1P43005 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
SLC1A1P43005 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.12□□□□□ -1.91
SLC1A1P43005 AC106730.3-201ENST00000624568 641 ntBASIC3.12□□□□□ -1.91
SLC1A1P43005 AC084035.1-201ENST00000634543 607 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms