Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
HTTP42858 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
HTTP42858 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC2.43□□□□□ -2.02
HTTP42858 SNORA51.11-201ENST00000384442 131 ntBASIC2.43□□□□□ -2.02
HTTP42858 AL450263.2-201ENST00000439400 589 ntBASIC2.43□□□□□ -2.02
HTTP42858 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.43□□□□□ -2.02
HTTP42858 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.43□□□□□ -2.02
HTTP42858 NPM1P35-201ENST00000533043 868 ntBASIC2.43□□□□□ -2.02
HTTP42858 AC245517.5-201ENST00000611529 162 ntBASIC2.43□□□□□ -2.02
HTTP42858 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
HTTP42858 HSP90AA5P-201ENST00000438353 2192 ntBASIC2.43□□□□□ -2.02
HTTP42858 RNA5SP190-201ENST00000365222 118 ntBASIC2.42□□□□□ -2.02
HTTP42858 USP9YP6-201ENST00000413550 854 ntBASIC2.42□□□□□ -2.02
HTTP42858 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.42□□□□□ -2.02
HTTP42858 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.42□□□□□ -2.02
HTTP42858 USP9YP34-201ENST00000453983 808 ntBASIC2.42□□□□□ -2.02
HTTP42858 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC2.42□□□□□ -2.02
HTTP42858 AC108479.2-201ENST00000617314 601 ntBASIC2.42□□□□□ -2.02
HTTP42858 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
HTTP42858 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
HTTP42858 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
HTTP42858 SNORA25.6-201ENST00000364121 118 ntBASIC2.42□□□□□ -2.02
HTTP42858 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
HTTP42858 AC126177.3-201ENST00000551839 688 ntBASIC2.42□□□□□ -2.02
HTTP42858 MIR4303-201ENST00000581299 66 ntBASIC2.42□□□□□ -2.02
HTTP42858 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.42□□□□□ -2.02
HTTP42858 FRG1DP-201ENST00000635586 771 ntBASIC2.42□□□□□ -2.02
HTTP42858 AL136964.1-201ENST00000622038 2990 ntBASIC2.42□□□□□ -2.02
HTTP42858 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC2.42□□□□□ -2.02
HTTP42858 CR769767.1-201ENST00000436337 346 ntBASIC2.42□□□□□ -2.02
HTTP42858 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.42□□□□□ -2.02
HTTP42858 AC007395.1-201ENST00000451333 677 ntBASIC2.42□□□□□ -2.02
HTTP42858 RPL38P4-201ENST00000502376 214 ntBASIC2.42□□□□□ -2.02
HTTP42858 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.42□□□□□ -2.02
HTTP42858 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
HTTP42858 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
HTTP42858 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.41□□□□□ -2.02
HTTP42858 OR4K11P-201ENST00000431829 904 ntBASIC2.41□□□□□ -2.02
HTTP42858 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.41□□□□□ -2.02
HTTP42858 AC107398.1-201ENST00000486904 505 ntBASIC2.41□□□□□ -2.02
HTTP42858 AC068781.1-201ENST00000488231 618 ntBASIC2.41□□□□□ -2.02
HTTP42858 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC2.41□□□□□ -2.02
HTTP42858 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.41□□□□□ -2.02
HTTP42858 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
HTTP42858 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
HTTP42858 AL353746.1-201ENST00000566293 6881 ntBASIC2.41□□□□□ -2.02
HTTP42858 Y_RNA.178-201ENST00000363832 102 ntBASIC2.41□□□□□ -2.02
HTTP42858 MIR6766-201ENST00000622641 72 ntBASIC2.41□□□□□ -2.02
HTTP42858 AC106730.3-201ENST00000624568 641 ntBASIC2.41□□□□□ -2.02
HTTP42858 AC009487.4-201ENST00000624969 3585 ntBASIC2.41□□□□□ -2.02
HTTP42858 AL358453.1-201ENST00000422522 250 ntBASIC2.4□□□□□ -2.02
HTTP42858 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC2.4□□□□□ -2.02
HTTP42858 AC002553.2-201ENST00000453217 340 ntBASIC2.4□□□□□ -2.02
HTTP42858 AC135721.1-201ENST00000497954 479 ntBASIC2.4□□□□□ -2.02
HTTP42858 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.4□□□□□ -2.02
HTTP42858 AC107871.2-201ENST00000612894 502 ntBASIC2.4□□□□□ -2.02
HTTP42858 MTND4P10-201ENST00000446199 1363 ntBASIC2.4□□□□□ -2.02
HTTP42858 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC2.4□□□□□ -2.03
HTTP42858 MIR9-3-201ENST00000385084 90 ntBASIC2.4□□□□□ -2.03
HTTP42858 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.4□□□□□ -2.03
HTTP42858 MTATP6P11-201ENST00000428071 670 ntBASIC2.4□□□□□ -2.03
HTTP42858 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC2.4□□□□□ -2.03
HTTP42858 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.4□□□□□ -2.03
HTTP42858 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.4□□□□□ -2.03
HTTP42858 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.4□□□□□ -2.03
HTTP42858 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC2.4□□□□□ -2.03
HTTP42858 U8.10-201ENST00000384260 133 ntBASIC2.39□□□□□ -2.03
HTTP42858 AL354719.1-201ENST00000406535 843 ntBASIC2.39□□□□□ -2.03
HTTP42858 RPL23AP76-201ENST00000441860 458 ntBASIC2.39□□□□□ -2.03
HTTP42858 snoZ278.1-201ENST00000517059 112 ntBASIC2.39□□□□□ -2.03
HTTP42858 AC025281.1-201ENST00000567026 265 ntBASIC2.39□□□□□ -2.03
HTTP42858 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
HTTP42858 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC2.39□□□□□ -2.03
HTTP42858 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC2.39□□□□□ -2.03
HTTP42858 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
HTTP42858 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
HTTP42858 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
HTTP42858 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
HTTP42858 MIR21-201ENST00000362134 72 ntBASIC2.39□□□□□ -2.03
HTTP42858 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
HTTP42858 Z73417.1-201ENST00000447373 778 ntBASIC2.39□□□□□ -2.03
HTTP42858 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.39□□□□□ -2.03
HTTP42858 AC147055.1-201ENST00000509261 750 ntBASIC2.39□□□□□ -2.03
HTTP42858 AP001207.1-201ENST00000524051 481 ntBASIC2.39□□□□□ -2.03
HTTP42858 U7.8-201ENST00000619968 63 ntBASIC2.39□□□□□ -2.03
HTTP42858 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
HTTP42858 RNU2-17P-201ENST00000410290 190 ntBASIC2.39□□□□□ -2.03
HTTP42858 MOB1AP2-201ENST00000446060 614 ntBASIC2.39□□□□□ -2.03
HTTP42858 FABP5P13-201ENST00000452144 328 ntBASIC2.39□□□□□ -2.03
HTTP42858 TXNP6-201ENST00000510190 310 ntBASIC2.39□□□□□ -2.03
HTTP42858 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.39□□□□□ -2.03
HTTP42858 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.39□□□□□ -2.03
HTTP42858 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC2.39□□□□□ -2.03
HTTP42858 AL445437.1-201ENST00000623157 3087 ntBASIC2.39□□□□□ -2.03
HTTP42858 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.38□□□□□ -2.03
HTTP42858 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC2.38□□□□□ -2.03
HTTP42858 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC2.38□□□□□ -2.03
HTTP42858 RNU6-392P-201ENST00000364926 101 ntBASIC2.38□□□□□ -2.03
HTTP42858 RNU4-62P-201ENST00000410125 130 ntBASIC2.38□□□□□ -2.03
HTTP42858 ALDH7A1P3-201ENST00000492517 345 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms