Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC3.61□□□□□ -1.83
CLIP1P30622 AC078814.3-201ENST00000553036 491 ntBASIC3.61□□□□□ -1.83
CLIP1P30622 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC3.61□□□□□ -1.83
CLIP1P30622 NTAN1P1-201ENST00000603150 646 ntBASIC3.61□□□□□ -1.83
CLIP1P30622 AC025811.1-201ENST00000604312 472 ntBASIC3.61□□□□□ -1.83
CLIP1P30622 VN1R7P-201ENST00000619242 903 ntBASIC3.61□□□□□ -1.83
CLIP1P30622 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.61□□□□□ -1.83
CLIP1P30622 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CLIP1P30622 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CLIP1P30622 AL354719.1-201ENST00000406535 843 ntBASIC3.61□□□□□ -1.83
CLIP1P30622 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC3.61□□□□□ -1.83
CLIP1P30622 PTP4A1P7-201ENST00000423476 514 ntBASIC3.61□□□□□ -1.83
CLIP1P30622 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.61□□□□□ -1.83
CLIP1P30622 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CLIP1P30622 AP000867.2-201ENST00000532468 320 ntBASIC3.61□□□□□ -1.83
CLIP1P30622 AC090312.2-201ENST00000582687 378 ntBASIC3.61□□□□□ -1.83
CLIP1P30622 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.61□□□□□ -1.83
CLIP1P30622 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.61□□□□□ -1.83
CLIP1P30622 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC3.61□□□□□ -1.83
CLIP1P30622 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.61□□□□□ -1.83
CLIP1P30622 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.6□□□□□ -1.83
CLIP1P30622 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CLIP1P30622 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CLIP1P30622 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CLIP1P30622 MIR6073-201ENST00000352083 89 ntBASIC3.6□□□□□ -1.83
CLIP1P30622 OR5H15-201ENST00000383696 930 ntBASIC3.6□□□□□ -1.83
CLIP1P30622 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.6□□□□□ -1.83
CLIP1P30622 AC092427.1-202ENST00000430569 476 ntBASIC3.6□□□□□ -1.83
CLIP1P30622 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC3.6□□□□□ -1.83
CLIP1P30622 OR4G11P-201ENST00000492842 939 ntBASIC3.6□□□□□ -1.83
CLIP1P30622 AC108210.2-201ENST00000503681 201 ntBASIC3.6□□□□□ -1.83
CLIP1P30622 SNRPGP18-201ENST00000553000 214 ntBASIC3.6□□□□□ -1.83
CLIP1P30622 TPMTP1-201ENST00000592307 737 ntBASIC3.6□□□□□ -1.83
CLIP1P30622 NF1P10-201ENST00000613227 742 ntBASIC3.6□□□□□ -1.83
CLIP1P30622 AL162233.1-201ENST00000620014 944 ntBASIC3.6□□□□□ -1.83
CLIP1P30622 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.6□□□□□ -1.83
CLIP1P30622 AC110994.2-201ENST00000635481 492 ntBASIC3.6□□□□□ -1.83
CLIP1P30622 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
CLIP1P30622 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
CLIP1P30622 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CLIP1P30622 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.59□□□□□ -1.83
CLIP1P30622 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.84
CLIP1P30622 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
CLIP1P30622 FAM133CP-201ENST00000332869 704 ntBASIC3.59□□□□□ -1.84
CLIP1P30622 RNU1-51P-201ENST00000365345 176 ntBASIC3.59□□□□□ -1.84
CLIP1P30622 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.59□□□□□ -1.84
CLIP1P30622 AL591806.2-201ENST00000433122 173 ntBASIC3.59□□□□□ -1.84
CLIP1P30622 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.59□□□□□ -1.84
CLIP1P30622 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC3.59□□□□□ -1.84
CLIP1P30622 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.59□□□□□ -1.84
CLIP1P30622 AC104090.1-201ENST00000506341 1171 ntBASIC3.59□□□□□ -1.84
CLIP1P30622 TBCAP3-201ENST00000512475 312 ntBASIC3.59□□□□□ -1.84
CLIP1P30622 HIGD1AP10-201ENST00000527837 282 ntBASIC3.59□□□□□ -1.84
CLIP1P30622 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.59□□□□□ -1.84
CLIP1P30622 AC060766.3-201ENST00000591442 263 ntBASIC3.59□□□□□ -1.84
CLIP1P30622 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.59□□□□□ -1.84
CLIP1P30622 AC026634.1-201ENST00000634369 198 ntBASIC3.59□□□□□ -1.84
CLIP1P30622 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.59□□□□□ -1.84
CLIP1P30622 AC009487.4-201ENST00000624969 3585 ntBASIC3.58□□□□□ -1.84
CLIP1P30622 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CLIP1P30622 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
CLIP1P30622 MIR221-201ENST00000385135 110 ntBASIC3.58□□□□□ -1.84
CLIP1P30622 RPS3AP26-201ENST00000398259 784 ntBASIC3.58□□□□□ -1.84
CLIP1P30622 HMGB1P11-201ENST00000413899 637 ntBASIC3.58□□□□□ -1.84
CLIP1P30622 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.58□□□□□ -1.84
CLIP1P30622 RPL39P40-201ENST00000445481 146 ntBASIC3.58□□□□□ -1.84
CLIP1P30622 AP000705.1-201ENST00000454567 350 ntBASIC3.58□□□□□ -1.84
CLIP1P30622 RNU6-1334P-201ENST00000516032 105 ntBASIC3.58□□□□□ -1.84
CLIP1P30622 MTND5P21-201ENST00000531961 522 ntBASIC3.58□□□□□ -1.84
CLIP1P30622 PISRT1-201ENST00000626175 531 ntBASIC3.58□□□□□ -1.84
CLIP1P30622 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
CLIP1P30622 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLIP1P30622 AC008432.1-201ENST00000615912 1320 ntBASIC3.57□□□□□ -1.84
CLIP1P30622 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.57□□□□□ -1.84
CLIP1P30622 GAPDHP39-201ENST00000481866 979 ntBASIC3.57□□□□□ -1.84
CLIP1P30622 SEC11B-201ENST00000518383 499 ntBASIC3.57□□□□□ -1.84
CLIP1P30622 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.57□□□□□ -1.84
CLIP1P30622 AL354950.1-201ENST00000614150 568 ntBASIC3.57□□□□□ -1.84
CLIP1P30622 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.57□□□□□ -1.84
CLIP1P30622 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CLIP1P30622 U6.98-201ENST00000637157 84 ntBASIC3.57□□□□□ -1.84
CLIP1P30622 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.57□□□□□ -1.84
CLIP1P30622 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC3.57□□□□□ -1.84
CLIP1P30622 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.57□□□□□ -1.84
CLIP1P30622 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
CLIP1P30622 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
CLIP1P30622 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.57□□□□□ -1.84
CLIP1P30622 ANKRD20A9P-201ENST00000457997 2978 ntBASIC3.56□□□□□ -1.84
CLIP1P30622 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.56□□□□□ -1.84
CLIP1P30622 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC3.56□□□□□ -1.84
CLIP1P30622 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.56□□□□□ -1.84
CLIP1P30622 AL031736.2-201ENST00000426573 787 ntBASIC3.56□□□□□ -1.84
CLIP1P30622 AC104058.1-201ENST00000448028 297 ntBASIC3.56□□□□□ -1.84
CLIP1P30622 RPL21P99-201ENST00000480369 423 ntBASIC3.56□□□□□ -1.84
CLIP1P30622 AC007536.1-201ENST00000533382 349 ntBASIC3.56□□□□□ -1.84
CLIP1P30622 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.56□□□□□ -1.84
CLIP1P30622 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.56□□□□□ -1.84
CLIP1P30622 AC009831.4-201ENST00000620744 325 ntBASIC3.56□□□□□ -1.84
CLIP1P30622 AC022031.1-201ENST00000585985 2593 ntBASIC3.56□□□□□ -1.84
CLIP1P30622 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms