Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.27□□□□□ -1.73
TM4SF1P30408 AL121603.1-201ENST00000553815 142 ntBASIC4.27□□□□□ -1.73
TM4SF1P30408 MIR3124-201ENST00000582636 67 ntBASIC4.27□□□□□ -1.73
TM4SF1P30408 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.27□□□□□ -1.73
TM4SF1P30408 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.27□□□□□ -1.73
TM4SF1P30408 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.27□□□□□ -1.73
TM4SF1P30408 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.27□□□□□ -1.73
TM4SF1P30408 AC097478.2-201ENST00000610572 514 ntBASIC4.27□□□□□ -1.73
TM4SF1P30408 AC073348.1-201ENST00000623002 331 ntBASIC4.27□□□□□ -1.73
TM4SF1P30408 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TM4SF1P30408 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.27□□□□□ -1.73
TM4SF1P30408 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.27□□□□□ -1.73
TM4SF1P30408 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.27□□□□□ -1.73
TM4SF1P30408 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
TM4SF1P30408 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.26□□□□□ -1.73
TM4SF1P30408 GDI2P1-201ENST00000429312 1336 ntBASIC4.26□□□□□ -1.73
TM4SF1P30408 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.26□□□□□ -1.73
TM4SF1P30408 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
TM4SF1P30408 SNORA44-201ENST00000384584 132 ntBASIC4.26□□□□□ -1.73
TM4SF1P30408 AL121972.1-201ENST00000402023 252 ntBASIC4.26□□□□□ -1.73
TM4SF1P30408 LUZP4P1-201ENST00000415420 344 ntBASIC4.26□□□□□ -1.73
TM4SF1P30408 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.26□□□□□ -1.73
TM4SF1P30408 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.26□□□□□ -1.73
TM4SF1P30408 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.26□□□□□ -1.73
TM4SF1P30408 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.26□□□□□ -1.73
TM4SF1P30408 AC005517.2-201ENST00000424673 553 ntBASIC4.26□□□□□ -1.73
TM4SF1P30408 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.26□□□□□ -1.73
TM4SF1P30408 AC092757.1-201ENST00000467293 467 ntBASIC4.26□□□□□ -1.73
TM4SF1P30408 MTCO3P35-201ENST00000485582 781 ntBASIC4.26□□□□□ -1.73
TM4SF1P30408 OR4G11P-201ENST00000492842 939 ntBASIC4.26□□□□□ -1.73
TM4SF1P30408 AC004069.2-201ENST00000505438 1114 ntBASIC4.26□□□□□ -1.73
TM4SF1P30408 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.26□□□□□ -1.73
TM4SF1P30408 AP006245.1-201ENST00000522549 120 ntBASIC4.26□□□□□ -1.73
TM4SF1P30408 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.26□□□□□ -1.73
TM4SF1P30408 AC125611.1-201ENST00000549563 229 ntBASIC4.26□□□□□ -1.73
TM4SF1P30408 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC4.26□□□□□ -1.73
TM4SF1P30408 OR4K7P-201ENST00000580232 945 ntBASIC4.26□□□□□ -1.73
TM4SF1P30408 AC233702.9-201ENST00000581528 203 ntBASIC4.26□□□□□ -1.73
TM4SF1P30408 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC4.26□□□□□ -1.73
TM4SF1P30408 AC007349.4-201ENST00000608114 532 ntBASIC4.26□□□□□ -1.73
TM4SF1P30408 AL451074.6-201ENST00000608512 729 ntBASIC4.26□□□□□ -1.73
TM4SF1P30408 AC233309.1-201ENST00000619522 751 ntBASIC4.26□□□□□ -1.73
TM4SF1P30408 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TM4SF1P30408 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
TM4SF1P30408 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
TM4SF1P30408 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TM4SF1P30408 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TM4SF1P30408 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TM4SF1P30408 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TM4SF1P30408 MIR422A-201ENST00000362286 90 ntBASIC4.25□□□□□ -1.73
TM4SF1P30408 SNORD74.4-201ENST00000364129 80 ntBASIC4.25□□□□□ -1.73
TM4SF1P30408 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
TM4SF1P30408 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.25□□□□□ -1.73
TM4SF1P30408 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.25□□□□□ -1.73
TM4SF1P30408 HIGD1AP15-201ENST00000416198 280 ntBASIC4.25□□□□□ -1.73
TM4SF1P30408 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.25□□□□□ -1.73
TM4SF1P30408 OR2X1P-201ENST00000421144 687 ntBASIC4.25□□□□□ -1.73
TM4SF1P30408 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.25□□□□□ -1.73
TM4SF1P30408 AL035410.1-201ENST00000427409 427 ntBASIC4.25□□□□□ -1.73
TM4SF1P30408 USP9YP11-201ENST00000427537 717 ntBASIC4.25□□□□□ -1.73
TM4SF1P30408 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.25□□□□□ -1.73
TM4SF1P30408 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC4.25□□□□□ -1.73
TM4SF1P30408 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.25□□□□□ -1.73
TM4SF1P30408 VN1R10P-201ENST00000447106 875 ntBASIC4.25□□□□□ -1.73
TM4SF1P30408 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.25□□□□□ -1.73
TM4SF1P30408 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC4.25□□□□□ -1.73
TM4SF1P30408 RN7SL429P-201ENST00000479090 223 ntBASIC4.25□□□□□ -1.73
TM4SF1P30408 RN7SL489P-201ENST00000486185 223 ntBASIC4.25□□□□□ -1.73
TM4SF1P30408 RN7SL327P-201ENST00000488659 223 ntBASIC4.25□□□□□ -1.73
TM4SF1P30408 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC4.25□□□□□ -1.73
TM4SF1P30408 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.25□□□□□ -1.73
TM4SF1P30408 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC4.25□□□□□ -1.73
TM4SF1P30408 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC4.25□□□□□ -1.73
TM4SF1P30408 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.25□□□□□ -1.73
TM4SF1P30408 TMEM248P1-201ENST00000510579 951 ntBASIC4.25□□□□□ -1.73
TM4SF1P30408 AC008837.2-201ENST00000513076 418 ntBASIC4.25□□□□□ -1.73
TM4SF1P30408 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.25□□□□□ -1.73
TM4SF1P30408 AP000926.4-201ENST00000527351 454 ntBASIC4.25□□□□□ -1.73
TM4SF1P30408 SLC2A13P1-201ENST00000531560 322 ntBASIC4.25□□□□□ -1.73
TM4SF1P30408 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.25□□□□□ -1.73
TM4SF1P30408 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TM4SF1P30408 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC4.25□□□□□ -1.73
TM4SF1P30408 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC4.25□□□□□ -1.73
TM4SF1P30408 AC009712.1-201ENST00000564938 316 ntBASIC4.25□□□□□ -1.73
TM4SF1P30408 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.25□□□□□ -1.73
TM4SF1P30408 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.25□□□□□ -1.73
TM4SF1P30408 KLKP1-201ENST00000595979 403 ntBASIC4.25□□□□□ -1.73
TM4SF1P30408 IGHV3-29-201ENST00000604817 344 ntBASIC4.25□□□□□ -1.73
TM4SF1P30408 AC013244.3-201ENST00000605614 388 ntBASIC4.25□□□□□ -1.73
TM4SF1P30408 AP001521.1-201ENST00000609150 300 ntBASIC4.25□□□□□ -1.73
TM4SF1P30408 AC008083.4-201ENST00000615076 444 ntBASIC4.25□□□□□ -1.73
TM4SF1P30408 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.25□□□□□ -1.73
TM4SF1P30408 RN7SL853P-201ENST00000617250 223 ntBASIC4.25□□□□□ -1.73
TM4SF1P30408 AC138932.5-201ENST00000617759 563 ntBASIC4.25□□□□□ -1.73
TM4SF1P30408 AC009318.4-201ENST00000620496 486 ntBASIC4.25□□□□□ -1.73
TM4SF1P30408 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC4.25□□□□□ -1.73
TM4SF1P30408 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.25□□□□□ -1.73
TM4SF1P30408 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
TM4SF1P30408 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
TM4SF1P30408 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms