Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 SNORA64.4-201ENST00000516632 81 ntBASIC3.34□□□□□ -1.87
XRCC1P18887 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.34□□□□□ -1.87
XRCC1P18887 AC019227.1-201ENST00000526902 510 ntBASIC3.34□□□□□ -1.87
XRCC1P18887 ZNF705CP-201ENST00000530515 889 ntBASIC3.34□□□□□ -1.87
XRCC1P18887 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.34□□□□□ -1.87
XRCC1P18887 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.34□□□□□ -1.87
XRCC1P18887 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.34□□□□□ -1.87
XRCC1P18887 MTCYBP27-201ENST00000555160 670 ntBASIC3.34□□□□□ -1.87
XRCC1P18887 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.34□□□□□ -1.87
XRCC1P18887 AL031985.2-201ENST00000600955 480 ntBASIC3.34□□□□□ -1.87
XRCC1P18887 AC113368.1-201ENST00000603736 382 ntBASIC3.34□□□□□ -1.87
XRCC1P18887 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.34□□□□□ -1.87
XRCC1P18887 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.34□□□□□ -1.87
XRCC1P18887 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.34□□□□□ -1.87
XRCC1P18887 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.34□□□□□ -1.87
XRCC1P18887 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.34□□□□□ -1.87
XRCC1P18887 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.34□□□□□ -1.87
XRCC1P18887 AC013437.2-201ENST00000639587 677 ntBASIC3.34□□□□□ -1.87
XRCC1P18887 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
XRCC1P18887 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
XRCC1P18887 ZNF37BP-203ENST00000452306 1352 ntBASIC3.34□□□□□ -1.88
XRCC1P18887 AC021755.1-201ENST00000559747 1447 ntBASIC3.34□□□□□ -1.88
XRCC1P18887 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
XRCC1P18887 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
XRCC1P18887 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
XRCC1P18887 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.33□□□□□ -1.88
XRCC1P18887 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.33□□□□□ -1.88
XRCC1P18887 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
XRCC1P18887 RNU6-1066P-201ENST00000363573 105 ntBASIC3.33□□□□□ -1.88
XRCC1P18887 RNA5SP387-201ENST00000364226 106 ntBASIC3.33□□□□□ -1.88
XRCC1P18887 AL133264.1-201ENST00000407157 562 ntBASIC3.33□□□□□ -1.88
XRCC1P18887 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.33□□□□□ -1.88
XRCC1P18887 HSFY4P-201ENST00000415994 1181 ntBASIC3.33□□□□□ -1.88
XRCC1P18887 AC245291.1-201ENST00000419501 328 ntBASIC3.33□□□□□ -1.88
XRCC1P18887 RPS6P14-201ENST00000425165 719 ntBASIC3.33□□□□□ -1.88
XRCC1P18887 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.33□□□□□ -1.88
XRCC1P18887 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.33□□□□□ -1.88
XRCC1P18887 AC092393.1-201ENST00000439625 742 ntBASIC3.33□□□□□ -1.88
XRCC1P18887 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.33□□□□□ -1.88
XRCC1P18887 AC104073.1-201ENST00000451988 151 ntBASIC3.33□□□□□ -1.88
XRCC1P18887 AC108078.3-201ENST00000502633 489 ntBASIC3.33□□□□□ -1.88
XRCC1P18887 AC114967.1-201ENST00000504890 259 ntBASIC3.33□□□□□ -1.88
XRCC1P18887 AC005921.1-201ENST00000510589 286 ntBASIC3.33□□□□□ -1.88
XRCC1P18887 IGKV2D-36-201ENST00000518643 226 ntBASIC3.33□□□□□ -1.88
XRCC1P18887 AC068657.1-201ENST00000520807 306 ntBASIC3.33□□□□□ -1.88
XRCC1P18887 IGHV3-76-201ENST00000522465 295 ntBASIC3.33□□□□□ -1.88
XRCC1P18887 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.33□□□□□ -1.88
XRCC1P18887 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.33□□□□□ -1.88
XRCC1P18887 AP003385.6-201ENST00000531603 374 ntBASIC3.33□□□□□ -1.88
XRCC1P18887 LRRC6P1-201ENST00000532188 885 ntBASIC3.33□□□□□ -1.88
XRCC1P18887 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.33□□□□□ -1.88
XRCC1P18887 AC107954.1-201ENST00000565906 727 ntBASIC3.33□□□□□ -1.88
XRCC1P18887 SNORD39.3-201ENST00000584451 71 ntBASIC3.33□□□□□ -1.88
XRCC1P18887 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.33□□□□□ -1.88
XRCC1P18887 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.33□□□□□ -1.88
XRCC1P18887 DPRXP5-201ENST00000604662 539 ntBASIC3.33□□□□□ -1.88
XRCC1P18887 AC011816.2-201ENST00000607089 556 ntBASIC3.33□□□□□ -1.88
XRCC1P18887 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC3.33□□□□□ -1.88
XRCC1P18887 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
XRCC1P18887 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
XRCC1P18887 AL157700.1-201ENST00000561973 1432 ntBASIC3.33□□□□□ -1.88
XRCC1P18887 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
XRCC1P18887 AC032011.1-201ENST00000611703 1549 ntBASIC3.33□□□□□ -1.88
XRCC1P18887 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
XRCC1P18887 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.32□□□□□ -1.88
XRCC1P18887 AC073346.2-201ENST00000624724 2058 ntBASIC3.32□□□□□ -1.88
XRCC1P18887 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
XRCC1P18887 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
XRCC1P18887 SNORA31-201ENST00000362607 130 ntBASIC3.32□□□□□ -1.88
XRCC1P18887 Y_RNA.333-201ENST00000365274 102 ntBASIC3.32□□□□□ -1.88
XRCC1P18887 AL079342.2-201ENST00000403367 482 ntBASIC3.32□□□□□ -1.88
XRCC1P18887 AL355143.1-201ENST00000407101 841 ntBASIC3.32□□□□□ -1.88
XRCC1P18887 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC3.32□□□□□ -1.88
XRCC1P18887 ZNF736P1Y-201ENST00000440402 1276 ntBASIC3.32□□□□□ -1.88
XRCC1P18887 RNF2P1-201ENST00000442955 1010 ntBASIC3.32□□□□□ -1.88
XRCC1P18887 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.32□□□□□ -1.88
XRCC1P18887 RN7SL807P-201ENST00000470923 297 ntBASIC3.32□□□□□ -1.88
XRCC1P18887 AP002884.2-201ENST00000471647 395 ntBASIC3.32□□□□□ -1.88
XRCC1P18887 SYPL1P1-201ENST00000473622 768 ntBASIC3.32□□□□□ -1.88
XRCC1P18887 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.32□□□□□ -1.88
XRCC1P18887 CAB39P1-201ENST00000502277 460 ntBASIC3.32□□□□□ -1.88
XRCC1P18887 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
XRCC1P18887 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.32□□□□□ -1.88
XRCC1P18887 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.32□□□□□ -1.88
XRCC1P18887 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.32□□□□□ -1.88
XRCC1P18887 AC118942.1-201ENST00000529674 1035 ntBASIC3.32□□□□□ -1.88
XRCC1P18887 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.32□□□□□ -1.88
XRCC1P18887 AP001317.1-201ENST00000531194 960 ntBASIC3.32□□□□□ -1.88
XRCC1P18887 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC3.32□□□□□ -1.88
XRCC1P18887 SULT1C2P1-202ENST00000562418 459 ntBASIC3.32□□□□□ -1.88
XRCC1P18887 AC122134.1-202ENST00000569111 1201 ntBASIC3.32□□□□□ -1.88
XRCC1P18887 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.32□□□□□ -1.88
XRCC1P18887 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.32□□□□□ -1.88
XRCC1P18887 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.32□□□□□ -1.88
XRCC1P18887 AC073387.2-201ENST00000604797 784 ntBASIC3.32□□□□□ -1.88
XRCC1P18887 AF129408.1-201ENST00000608767 431 ntBASIC3.32□□□□□ -1.88
XRCC1P18887 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.32□□□□□ -1.88
XRCC1P18887 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.32□□□□□ -1.88
XRCC1P18887 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.32□□□□□ -1.88
XRCC1P18887 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 132 ms