Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.77□□□□□ -1.49
HOXD8P13378 AL161722.2-201ENST00000434731 981 ntBASIC5.77□□□□□ -1.49
HOXD8P13378 FABP5P14-201ENST00000437273 393 ntBASIC5.77□□□□□ -1.49
HOXD8P13378 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC5.77□□□□□ -1.49
HOXD8P13378 AL035666.1-201ENST00000446195 348 ntBASIC5.77□□□□□ -1.49
HOXD8P13378 MTCO3P10-201ENST00000455912 772 ntBASIC5.77□□□□□ -1.49
HOXD8P13378 ELOCP24-201ENST00000456370 334 ntBASIC5.77□□□□□ -1.49
HOXD8P13378 RNU7-180P-201ENST00000459240 63 ntBASIC5.77□□□□□ -1.49
HOXD8P13378 RNU6-764P-201ENST00000516396 105 ntBASIC5.77□□□□□ -1.49
HOXD8P13378 AC100784.1-201ENST00000522790 310 ntBASIC5.77□□□□□ -1.49
HOXD8P13378 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.77□□□□□ -1.49
HOXD8P13378 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.77□□□□□ -1.49
HOXD8P13378 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC5.77□□□□□ -1.49
HOXD8P13378 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC5.77□□□□□ -1.49
HOXD8P13378 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.77□□□□□ -1.49
HOXD8P13378 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC5.77□□□□□ -1.49
HOXD8P13378 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HOXD8P13378 COX6CP3-201ENST00000580869 223 ntBASIC5.77□□□□□ -1.49
HOXD8P13378 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC5.77□□□□□ -1.49
HOXD8P13378 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC5.77□□□□□ -1.49
HOXD8P13378 AL670379.11-201ENST00000604059 253 ntBASIC5.77□□□□□ -1.49
HOXD8P13378 AL670379.10-201ENST00000604330 253 ntBASIC5.77□□□□□ -1.49
HOXD8P13378 AL670379.12-201ENST00000605291 253 ntBASIC5.77□□□□□ -1.49
HOXD8P13378 AL670379.9-201ENST00000605428 253 ntBASIC5.77□□□□□ -1.49
HOXD8P13378 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC5.77□□□□□ -1.49
HOXD8P13378 Z69720.2-201ENST00000624755 279 ntBASIC5.77□□□□□ -1.49
HOXD8P13378 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.77□□□□□ -1.49
HOXD8P13378 AC000095.2-202ENST00000637415 154 ntBASIC5.77□□□□□ -1.49
HOXD8P13378 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.77□□□□□ -1.49
HOXD8P13378 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.77□□□□□ -1.49
HOXD8P13378 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HOXD8P13378 AP002512.4-202ENST00000641599 4530 ntBASIC5.77□□□□□ -1.49
HOXD8P13378 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.77□□□□□ -1.49
HOXD8P13378 AP000432.2-201ENST00000624164 2048 ntBASIC5.77□□□□□ -1.49
HOXD8P13378 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.77□□□□□ -1.49
HOXD8P13378 AC002525.1-201ENST00000624392 1622 ntBASIC5.77□□□□□ -1.49
HOXD8P13378 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HOXD8P13378 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
HOXD8P13378 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HOXD8P13378 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HOXD8P13378 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HOXD8P13378 AC026951.1-201ENST00000559530 2459 ntBASIC5.76□□□□□ -1.49
HOXD8P13378 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HOXD8P13378 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.76□□□□□ -1.49
HOXD8P13378 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HOXD8P13378 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HOXD8P13378 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HOXD8P13378 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
HOXD8P13378 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
HOXD8P13378 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HOXD8P13378 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
HOXD8P13378 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HOXD8P13378 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HOXD8P13378 Y_RNA.176-201ENST00000363815 109 ntBASIC5.76□□□□□ -1.49
HOXD8P13378 U3.12-201ENST00000364498 214 ntBASIC5.76□□□□□ -1.49
HOXD8P13378 RNA5SP428-201ENST00000365129 132 ntBASIC5.76□□□□□ -1.49
HOXD8P13378 Y_RNA.557-201ENST00000384680 107 ntBASIC5.76□□□□□ -1.49
HOXD8P13378 MIR589-201ENST00000385238 99 ntBASIC5.76□□□□□ -1.49
HOXD8P13378 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
HOXD8P13378 MRPL42P3-201ENST00000401492 326 ntBASIC5.76□□□□□ -1.49
HOXD8P13378 AC069218.2-201ENST00000411665 344 ntBASIC5.76□□□□□ -1.49
HOXD8P13378 FAR2P2-201ENST00000413041 594 ntBASIC5.76□□□□□ -1.49
HOXD8P13378 REREP1Y-201ENST00000422655 198 ntBASIC5.76□□□□□ -1.49
HOXD8P13378 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.76□□□□□ -1.49
HOXD8P13378 FAR2P4-202ENST00000425399 584 ntBASIC5.76□□□□□ -1.49
HOXD8P13378 AF228730.2-201ENST00000438784 848 ntBASIC5.76□□□□□ -1.49
HOXD8P13378 REREP2Y-201ENST00000439103 200 ntBASIC5.76□□□□□ -1.49
HOXD8P13378 RAC1P7-201ENST00000445367 377 ntBASIC5.76□□□□□ -1.49
HOXD8P13378 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.76□□□□□ -1.49
HOXD8P13378 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.76□□□□□ -1.49
HOXD8P13378 AC009220.1-201ENST00000451614 275 ntBASIC5.76□□□□□ -1.49
HOXD8P13378 MTND1P9-201ENST00000453775 944 ntBASIC5.76□□□□□ -1.49
HOXD8P13378 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.76□□□□□ -1.49
HOXD8P13378 AL162395.1-201ENST00000457882 422 ntBASIC5.76□□□□□ -1.49
HOXD8P13378 AC006511.1-201ENST00000470614 315 ntBASIC5.76□□□□□ -1.49
HOXD8P13378 RN7SL814P-201ENST00000487715 300 ntBASIC5.76□□□□□ -1.49
HOXD8P13378 AC007686.1-201ENST00000488511 463 ntBASIC5.76□□□□□ -1.49
HOXD8P13378 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.76□□□□□ -1.49
HOXD8P13378 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.76□□□□□ -1.49
HOXD8P13378 COX6B1P5-201ENST00000509843 249 ntBASIC5.76□□□□□ -1.49
HOXD8P13378 HMGN1P9-201ENST00000515212 298 ntBASIC5.76□□□□□ -1.49
HOXD8P13378 Y_RNA.661-201ENST00000516003 99 ntBASIC5.76□□□□□ -1.49
HOXD8P13378 RNU4ATAC7P-201ENST00000516280 125 ntBASIC5.76□□□□□ -1.49
HOXD8P13378 RNU2-10P-201ENST00000516375 211 ntBASIC5.76□□□□□ -1.49
HOXD8P13378 RNA5SP454-201ENST00000517231 127 ntBASIC5.76□□□□□ -1.49
HOXD8P13378 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC5.76□□□□□ -1.49
HOXD8P13378 AC109635.4-202ENST00000531666 412 ntBASIC5.76□□□□□ -1.49
HOXD8P13378 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC5.76□□□□□ -1.49
HOXD8P13378 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
HOXD8P13378 IMMP1LP2-201ENST00000552954 492 ntBASIC5.76□□□□□ -1.49
HOXD8P13378 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC5.76□□□□□ -1.49
HOXD8P13378 EDDM3DP-201ENST00000554692 434 ntBASIC5.76□□□□□ -1.49
HOXD8P13378 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.76□□□□□ -1.49
HOXD8P13378 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC5.76□□□□□ -1.49
HOXD8P13378 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.76□□□□□ -1.49
HOXD8P13378 MIR7853-201ENST00000584820 132 ntBASIC5.76□□□□□ -1.49
HOXD8P13378 MIR4424-201ENST00000585257 86 ntBASIC5.76□□□□□ -1.49
HOXD8P13378 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.76□□□□□ -1.49
HOXD8P13378 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.76□□□□□ -1.49
HOXD8P13378 AC008782.1-201ENST00000603386 430 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms