Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 RNU6-374P-201ENST00000364146 108 ntBASIC3.61□□□□□ -1.83
TOP1P11387 RNU6-1151P-201ENST00000384684 107 ntBASIC3.61□□□□□ -1.83
TOP1P11387 SNORD67-201ENST00000390833 111 ntBASIC3.61□□□□□ -1.83
TOP1P11387 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
TOP1P11387 AC110754.1-201ENST00000399740 601 ntBASIC3.61□□□□□ -1.83
TOP1P11387 RPL7P25-201ENST00000404151 721 ntBASIC3.61□□□□□ -1.83
TOP1P11387 AL138885.1-201ENST00000405921 675 ntBASIC3.61□□□□□ -1.83
TOP1P11387 UBE2V1P15-201ENST00000407776 448 ntBASIC3.61□□□□□ -1.83
TOP1P11387 SNORA11C-201ENST00000408532 129 ntBASIC3.61□□□□□ -1.83
TOP1P11387 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.61□□□□□ -1.83
TOP1P11387 Z92545.1-201ENST00000411782 234 ntBASIC3.61□□□□□ -1.83
TOP1P11387 TATDN1P1-201ENST00000414123 891 ntBASIC3.61□□□□□ -1.83
TOP1P11387 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.61□□□□□ -1.83
TOP1P11387 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.61□□□□□ -1.83
TOP1P11387 HSFY1P1-201ENST00000423928 1178 ntBASIC3.61□□□□□ -1.83
TOP1P11387 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.61□□□□□ -1.83
TOP1P11387 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.61□□□□□ -1.83
TOP1P11387 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.61□□□□□ -1.83
TOP1P11387 MTND1P33-201ENST00000446251 917 ntBASIC3.61□□□□□ -1.83
TOP1P11387 RSL24D1P3-201ENST00000449255 495 ntBASIC3.61□□□□□ -1.83
TOP1P11387 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.61□□□□□ -1.83
TOP1P11387 AL136126.1-201ENST00000473603 402 ntBASIC3.61□□□□□ -1.83
TOP1P11387 ST13P14-201ENST00000474095 734 ntBASIC3.61□□□□□ -1.83
TOP1P11387 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.61□□□□□ -1.83
TOP1P11387 AP002404.1-201ENST00000532005 451 ntBASIC3.61□□□□□ -1.83
TOP1P11387 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.61□□□□□ -1.83
TOP1P11387 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.61□□□□□ -1.83
TOP1P11387 AL121603.1-201ENST00000553815 142 ntBASIC3.61□□□□□ -1.83
TOP1P11387 AL355812.1-201ENST00000603215 216 ntBASIC3.61□□□□□ -1.83
TOP1P11387 RPL21P136-201ENST00000605378 396 ntBASIC3.61□□□□□ -1.83
TOP1P11387 AL136370.1-201ENST00000608166 691 ntBASIC3.61□□□□□ -1.83
TOP1P11387 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.61□□□□□ -1.83
TOP1P11387 FRG1HP-204ENST00000617940 757 ntBASIC3.61□□□□□ -1.83
TOP1P11387 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC3.61□□□□□ -1.83
TOP1P11387 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.61□□□□□ -1.83
TOP1P11387 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.61□□□□□ -1.83
TOP1P11387 MAPK10-362ENST00000641864 4484 ntBASIC3.6□□□□□ -1.83
TOP1P11387 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
TOP1P11387 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.6□□□□□ -1.83
TOP1P11387 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.6□□□□□ -1.83
TOP1P11387 RNU6-1226P-201ENST00000384317 107 ntBASIC3.6□□□□□ -1.83
TOP1P11387 SNORA48.8-201ENST00000391324 134 ntBASIC3.6□□□□□ -1.83
TOP1P11387 RPL21P3-201ENST00000395517 478 ntBASIC3.6□□□□□ -1.83
TOP1P11387 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.6□□□□□ -1.83
TOP1P11387 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.6□□□□□ -1.83
TOP1P11387 AC073508.1-201ENST00000428866 656 ntBASIC3.6□□□□□ -1.83
TOP1P11387 AC011242.1-201ENST00000433596 1158 ntBASIC3.6□□□□□ -1.83
TOP1P11387 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.6□□□□□ -1.83
TOP1P11387 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.6□□□□□ -1.83
TOP1P11387 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.6□□□□□ -1.83
TOP1P11387 AC146507.2-201ENST00000460608 476 ntBASIC3.6□□□□□ -1.83
TOP1P11387 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.6□□□□□ -1.83
TOP1P11387 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
TOP1P11387 AC010265.1-201ENST00000513509 211 ntBASIC3.6□□□□□ -1.83
TOP1P11387 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.6□□□□□ -1.83
TOP1P11387 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.6□□□□□ -1.83
TOP1P11387 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
TOP1P11387 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.6□□□□□ -1.83
TOP1P11387 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.6□□□□□ -1.83
TOP1P11387 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.6□□□□□ -1.83
TOP1P11387 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.6□□□□□ -1.83
TOP1P11387 AL669831.4-202ENST00000590817 238 ntBASIC3.6□□□□□ -1.83
TOP1P11387 DPRXP5-201ENST00000604662 539 ntBASIC3.6□□□□□ -1.83
TOP1P11387 AL356490.1-201ENST00000623079 479 ntBASIC3.6□□□□□ -1.83
TOP1P11387 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.6□□□□□ -1.83
TOP1P11387 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.6□□□□□ -1.83
TOP1P11387 SNORA50A-202ENST00000629536 136 ntBASIC3.6□□□□□ -1.83
TOP1P11387 MTND5P24-201ENST00000438892 1767 ntBASIC3.6□□□□□ -1.83
TOP1P11387 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.6□□□□□ -1.83
TOP1P11387 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
TOP1P11387 RNU6-525P-201ENST00000363685 104 ntBASIC3.59□□□□□ -1.83
TOP1P11387 RNA5SP27-201ENST00000363839 119 ntBASIC3.59□□□□□ -1.83
TOP1P11387 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
TOP1P11387 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
TOP1P11387 AL353692.2-201ENST00000407054 335 ntBASIC3.59□□□□□ -1.83
TOP1P11387 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.59□□□□□ -1.83
TOP1P11387 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.59□□□□□ -1.83
TOP1P11387 RAD23BP2-201ENST00000416003 1207 ntBASIC3.59□□□□□ -1.83
TOP1P11387 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.59□□□□□ -1.83
TOP1P11387 PNRC2P1-201ENST00000423940 420 ntBASIC3.59□□□□□ -1.83
TOP1P11387 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
TOP1P11387 AC091390.3-201ENST00000426478 338 ntBASIC3.59□□□□□ -1.83
TOP1P11387 RPS12P18-201ENST00000442381 270 ntBASIC3.59□□□□□ -1.83
TOP1P11387 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.59□□□□□ -1.83
TOP1P11387 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.59□□□□□ -1.83
TOP1P11387 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC3.59□□□□□ -1.83
TOP1P11387 AC104108.1-201ENST00000509930 412 ntBASIC3.59□□□□□ -1.83
TOP1P11387 RNU6-202P-201ENST00000515998 96 ntBASIC3.59□□□□□ -1.83
TOP1P11387 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.59□□□□□ -1.83
TOP1P11387 AC233266.2-201ENST00000567067 528 ntBASIC3.59□□□□□ -1.83
TOP1P11387 AL160281.1-201ENST00000605307 311 ntBASIC3.59□□□□□ -1.83
TOP1P11387 AC005014.3-201ENST00000605985 190 ntBASIC3.59□□□□□ -1.83
TOP1P11387 AP001033.2-201ENST00000609701 1003 ntBASIC3.59□□□□□ -1.83
TOP1P11387 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.59□□□□□ -1.83
TOP1P11387 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
TOP1P11387 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
TOP1P11387 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.59□□□□□ -1.84
TOP1P11387 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.58□□□□□ -1.84
TOP1P11387 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TOP1P11387 GNG5P1-201ENST00000255500 204 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms