Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 MIR1282-201ENST00000408865 101 ntBASIC5.72□□□□□ -1.49
RARAP10276 HMGN1P24-201ENST00000412282 298 ntBASIC5.72□□□□□ -1.49
RARAP10276 BMS1P17-202ENST00000416720 316 ntBASIC5.72□□□□□ -1.49
RARAP10276 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.72□□□□□ -1.49
RARAP10276 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RARAP10276 AC019185.1-201ENST00000442718 389 ntBASIC5.72□□□□□ -1.49
RARAP10276 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC5.72□□□□□ -1.49
RARAP10276 RN7SL72P-201ENST00000460697 269 ntBASIC5.72□□□□□ -1.49
RARAP10276 AC128713.1-201ENST00000471495 306 ntBASIC5.72□□□□□ -1.49
RARAP10276 AC007998.1-201ENST00000474156 672 ntBASIC5.72□□□□□ -1.49
RARAP10276 RN7SL809P-201ENST00000482040 297 ntBASIC5.72□□□□□ -1.49
RARAP10276 AC015911.1-201ENST00000495111 156 ntBASIC5.72□□□□□ -1.49
RARAP10276 AC097473.1-201ENST00000508142 408 ntBASIC5.72□□□□□ -1.49
RARAP10276 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC5.72□□□□□ -1.49
RARAP10276 AC026801.2-201ENST00000515352 425 ntBASIC5.72□□□□□ -1.49
RARAP10276 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.72□□□□□ -1.49
RARAP10276 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.72□□□□□ -1.49
RARAP10276 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.72□□□□□ -1.49
RARAP10276 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.72□□□□□ -1.49
RARAP10276 RN7SL290P-201ENST00000578661 300 ntBASIC5.72□□□□□ -1.49
RARAP10276 AP005403.1-201ENST00000579720 229 ntBASIC5.72□□□□□ -1.49
RARAP10276 BNIP3P16-201ENST00000589779 534 ntBASIC5.72□□□□□ -1.49
RARAP10276 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC5.72□□□□□ -1.49
RARAP10276 PRR13P7-201ENST00000605538 430 ntBASIC5.72□□□□□ -1.49
RARAP10276 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RARAP10276 HMGB1P24-202ENST00000615653 685 ntBASIC5.72□□□□□ -1.49
RARAP10276 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.72□□□□□ -1.49
RARAP10276 ZNF519P1-201ENST00000449011 1626 ntBASIC5.72□□□□□ -1.49
RARAP10276 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RARAP10276 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
RARAP10276 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RARAP10276 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.72□□□□□ -1.49
RARAP10276 ADAM5-202ENST00000399789 1942 ntBASIC5.72□□□□□ -1.49
RARAP10276 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
RARAP10276 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RARAP10276 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
RARAP10276 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.49
RARAP10276 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RARAP10276 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RARAP10276 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
RARAP10276 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
RARAP10276 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
RARAP10276 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RARAP10276 RNU6-593P-201ENST00000364716 112 ntBASIC5.71□□□□□ -1.5
RARAP10276 RNU6-890P-201ENST00000384121 107 ntBASIC5.71□□□□□ -1.5
RARAP10276 RNY1P14-201ENST00000384426 108 ntBASIC5.71□□□□□ -1.5
RARAP10276 RNA5SP284-201ENST00000384547 118 ntBASIC5.71□□□□□ -1.5
RARAP10276 RNU2-36P-201ENST00000410361 191 ntBASIC5.71□□□□□ -1.5
RARAP10276 RNU2-47P-201ENST00000410649 186 ntBASIC5.71□□□□□ -1.5
RARAP10276 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC5.71□□□□□ -1.5
RARAP10276 MTND6P12-201ENST00000428247 522 ntBASIC5.71□□□□□ -1.5
RARAP10276 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.71□□□□□ -1.5
RARAP10276 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.71□□□□□ -1.5
RARAP10276 HMGB1P12-201ENST00000438594 598 ntBASIC5.71□□□□□ -1.5
RARAP10276 AC090804.1-201ENST00000448870 490 ntBASIC5.71□□□□□ -1.5
RARAP10276 SNORD121B-201ENST00000458838 81 ntBASIC5.71□□□□□ -1.5
RARAP10276 RNU7-59P-201ENST00000459101 61 ntBASIC5.71□□□□□ -1.5
RARAP10276 RPL21P93-201ENST00000480465 489 ntBASIC5.71□□□□□ -1.5
RARAP10276 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.71□□□□□ -1.5
RARAP10276 AC008526.1-201ENST00000509149 338 ntBASIC5.71□□□□□ -1.5
RARAP10276 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC5.71□□□□□ -1.5
RARAP10276 AP005902.1-201ENST00000521358 186 ntBASIC5.71□□□□□ -1.5
RARAP10276 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.71□□□□□ -1.5
RARAP10276 AC135001.1-201ENST00000544546 283 ntBASIC5.71□□□□□ -1.5
RARAP10276 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC5.71□□□□□ -1.5
RARAP10276 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.71□□□□□ -1.5
RARAP10276 AL049872.1-201ENST00000556323 322 ntBASIC5.71□□□□□ -1.5
RARAP10276 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.71□□□□□ -1.5
RARAP10276 AC010547.6-201ENST00000571789 193 ntBASIC5.71□□□□□ -1.5
RARAP10276 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.71□□□□□ -1.5
RARAP10276 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC5.71□□□□□ -1.5
RARAP10276 AC012616.1-201ENST00000600294 197 ntBASIC5.71□□□□□ -1.5
RARAP10276 AP000769.2-201ENST00000602344 396 ntBASIC5.71□□□□□ -1.5
RARAP10276 uc_338.7-201ENST00000621834 124 ntBASIC5.71□□□□□ -1.5
RARAP10276 CU639417.4-201ENST00000623928 207 ntBASIC5.71□□□□□ -1.5
RARAP10276 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.71□□□□□ -1.5
RARAP10276 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RARAP10276 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.71□□□□□ -1.5
RARAP10276 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.71□□□□□ -1.5
RARAP10276 MTND5P28-201ENST00000438005 1594 ntBASIC5.71□□□□□ -1.5
RARAP10276 BDP1P-201ENST00000582658 1990 ntBASIC5.71□□□□□ -1.5
RARAP10276 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RARAP10276 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RARAP10276 THAP12P5-201ENST00000405864 2275 ntBASIC5.71□□□□□ -1.5
RARAP10276 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.71□□□□□ -1.5
RARAP10276 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.7□□□□□ -1.5
RARAP10276 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
RARAP10276 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
RARAP10276 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RARAP10276 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.7□□□□□ -1.5
RARAP10276 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RARAP10276 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RARAP10276 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.7□□□□□ -1.5
RARAP10276 AL445437.1-201ENST00000623157 3087 ntBASIC5.7□□□□□ -1.5
RARAP10276 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RARAP10276 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
RARAP10276 RNU6-379P-201ENST00000363813 104 ntBASIC5.7□□□□□ -1.5
RARAP10276 RNA5SP510-201ENST00000364697 99 ntBASIC5.7□□□□□ -1.5
RARAP10276 RNU6-61P-201ENST00000365528 109 ntBASIC5.7□□□□□ -1.5
RARAP10276 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms