Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.22□□□□□ -1.89
TPM1P09493 RPL21P75-201ENST00000396599 483 ntBASIC3.22□□□□□ -1.89
TPM1P09493 RPL21P28-201ENST00000401418 483 ntBASIC3.22□□□□□ -1.89
TPM1P09493 AL592114.1-201ENST00000403842 483 ntBASIC3.22□□□□□ -1.89
TPM1P09493 U3.42-201ENST00000408746 214 ntBASIC3.22□□□□□ -1.89
TPM1P09493 SSXP9-201ENST00000417503 292 ntBASIC3.22□□□□□ -1.89
TPM1P09493 RPL36AP6-201ENST00000435770 321 ntBASIC3.22□□□□□ -1.89
TPM1P09493 FABP5P3-201ENST00000437960 408 ntBASIC3.22□□□□□ -1.89
TPM1P09493 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.22□□□□□ -1.89
TPM1P09493 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.22□□□□□ -1.89
TPM1P09493 RPL21P39-201ENST00000463605 483 ntBASIC3.22□□□□□ -1.89
TPM1P09493 AC011979.1-201ENST00000472300 483 ntBASIC3.22□□□□□ -1.89
TPM1P09493 RPL21P93-201ENST00000480465 489 ntBASIC3.22□□□□□ -1.89
TPM1P09493 AC233702.1-201ENST00000482905 502 ntBASIC3.22□□□□□ -1.89
TPM1P09493 AC087190.1-201ENST00000484462 480 ntBASIC3.22□□□□□ -1.89
TPM1P09493 AC093591.1-201ENST00000491435 481 ntBASIC3.22□□□□□ -1.89
TPM1P09493 RPL21P129-201ENST00000491732 478 ntBASIC3.22□□□□□ -1.89
TPM1P09493 RPL21P16-201ENST00000495531 483 ntBASIC3.22□□□□□ -1.89
TPM1P09493 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.22□□□□□ -1.89
TPM1P09493 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
TPM1P09493 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.22□□□□□ -1.89
TPM1P09493 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.22□□□□□ -1.89
TPM1P09493 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.22□□□□□ -1.89
TPM1P09493 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.22□□□□□ -1.89
TPM1P09493 DNAJC8P1-201ENST00000554535 372 ntBASIC3.22□□□□□ -1.89
TPM1P09493 AC106785.1-201ENST00000565935 262 ntBASIC3.22□□□□□ -1.89
TPM1P09493 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.22□□□□□ -1.89
TPM1P09493 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.22□□□□□ -1.89
TPM1P09493 AL031985.2-201ENST00000600955 480 ntBASIC3.22□□□□□ -1.89
TPM1P09493 AL513477.2-201ENST00000607858 568 ntBASIC3.22□□□□□ -1.89
TPM1P09493 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
TPM1P09493 AC006249.1-201ENST00000621223 471 ntBASIC3.22□□□□□ -1.89
TPM1P09493 AC039056.2-201ENST00000622261 511 ntBASIC3.22□□□□□ -1.89
TPM1P09493 AC012442.3-202ENST00000636742 206 ntBASIC3.22□□□□□ -1.89
TPM1P09493 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
TPM1P09493 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
TPM1P09493 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.21□□□□□ -1.9
TPM1P09493 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
TPM1P09493 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC3.21□□□□□ -1.9
TPM1P09493 ENSAP3-201ENST00000312710 333 ntBASIC3.21□□□□□ -1.9
TPM1P09493 TAF9BP2-201ENST00000400856 499 ntBASIC3.21□□□□□ -1.9
TPM1P09493 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.21□□□□□ -1.9
TPM1P09493 AC010881.1-201ENST00000433830 235 ntBASIC3.21□□□□□ -1.9
TPM1P09493 RAB11AP1-201ENST00000442978 646 ntBASIC3.21□□□□□ -1.9
TPM1P09493 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.21□□□□□ -1.9
TPM1P09493 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.21□□□□□ -1.9
TPM1P09493 AC015908.1-201ENST00000478739 476 ntBASIC3.21□□□□□ -1.9
TPM1P09493 AC006499.5-201ENST00000505037 514 ntBASIC3.21□□□□□ -1.9
TPM1P09493 HSPD1P15-201ENST00000505573 1122 ntBASIC3.21□□□□□ -1.9
TPM1P09493 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC3.21□□□□□ -1.9
TPM1P09493 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.21□□□□□ -1.9
TPM1P09493 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC3.21□□□□□ -1.9
TPM1P09493 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
TPM1P09493 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.21□□□□□ -1.9
TPM1P09493 MIR4697-201ENST00000582977 78 ntBASIC3.21□□□□□ -1.9
TPM1P09493 AC093227.2-201ENST00000589357 285 ntBASIC3.21□□□□□ -1.9
TPM1P09493 DUXAP4-201ENST00000603046 613 ntBASIC3.21□□□□□ -1.9
TPM1P09493 AC025588.3-201ENST00000604182 274 ntBASIC3.21□□□□□ -1.9
TPM1P09493 AC009570.1-201ENST00000609599 745 ntBASIC3.21□□□□□ -1.9
TPM1P09493 AC090115.4-201ENST00000609970 188 ntBASIC3.21□□□□□ -1.9
TPM1P09493 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
TPM1P09493 AC004696.1-201ENST00000614345 607 ntBASIC3.21□□□□□ -1.9
TPM1P09493 AC025016.1-201ENST00000616746 682 ntBASIC3.21□□□□□ -1.9
TPM1P09493 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.21□□□□□ -1.9
TPM1P09493 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.21□□□□□ -1.9
TPM1P09493 AC006378.2-201ENST00000623178 2476 ntBASIC3.2□□□□□ -1.9
TPM1P09493 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
TPM1P09493 MIR512-1-201ENST00000384913 84 ntBASIC3.2□□□□□ -1.9
TPM1P09493 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.2□□□□□ -1.9
TPM1P09493 AL606495.1-201ENST00000422100 813 ntBASIC3.2□□□□□ -1.9
TPM1P09493 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC3.2□□□□□ -1.9
TPM1P09493 MTCYBP34-201ENST00000439552 670 ntBASIC3.2□□□□□ -1.9
TPM1P09493 RPL23AP58-201ENST00000440453 469 ntBASIC3.2□□□□□ -1.9
TPM1P09493 MTND1P33-201ENST00000446251 917 ntBASIC3.2□□□□□ -1.9
TPM1P09493 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.2□□□□□ -1.9
TPM1P09493 AL162389.1-201ENST00000449233 177 ntBASIC3.2□□□□□ -1.9
TPM1P09493 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.2□□□□□ -1.9
TPM1P09493 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC3.2□□□□□ -1.9
TPM1P09493 AC008155.2-201ENST00000464337 397 ntBASIC3.2□□□□□ -1.9
TPM1P09493 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
TPM1P09493 RN7SL297P-201ENST00000483161 293 ntBASIC3.2□□□□□ -1.9
TPM1P09493 DYNLL1P6-201ENST00000503440 264 ntBASIC3.2□□□□□ -1.9
TPM1P09493 SNORA31.8-201ENST00000516327 108 ntBASIC3.2□□□□□ -1.9
TPM1P09493 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.2□□□□□ -1.9
TPM1P09493 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.2□□□□□ -1.9
TPM1P09493 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.2□□□□□ -1.9
TPM1P09493 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.2□□□□□ -1.9
TPM1P09493 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.2□□□□□ -1.9
TPM1P09493 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC3.2□□□□□ -1.9
TPM1P09493 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC3.2□□□□□ -1.9
TPM1P09493 AC096947.1-201ENST00000603233 470 ntBASIC3.2□□□□□ -1.9
TPM1P09493 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.2□□□□□ -1.9
TPM1P09493 AC139713.2-210ENST00000641741 992 ntBASIC3.2□□□□□ -1.9
TPM1P09493 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.2□□□□□ -1.9
TPM1P09493 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.2□□□□□ -1.9
TPM1P09493 GABRG2-229ENST00000641017 3628 ntBASIC3.2□□□□□ -1.9
TPM1P09493 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.2□□□□□ -1.9
TPM1P09493 AC233263.6-201ENST00000631132 1963 ntBASIC3.2□□□□□ -1.9
TPM1P09493 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
TPM1P09493 RNU6-799P-201ENST00000363567 107 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms