Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CXCL1P09341 AC138915.1-201ENST00000565427 1685 ntBASIC2.12□□□□□ -2.07
CXCL1P09341 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.12□□□□□ -2.07
CXCL1P09341 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CXCL1P09341 ARF4P3-201ENST00000397387 509 ntBASIC2.12□□□□□ -2.07
CXCL1P09341 RNA5SP56-201ENST00000410277 118 ntBASIC2.12□□□□□ -2.07
CXCL1P09341 RN7SKP220-201ENST00000410611 288 ntBASIC2.12□□□□□ -2.07
CXCL1P09341 RPS20P25-201ENST00000412447 352 ntBASIC2.12□□□□□ -2.07
CXCL1P09341 AL606495.1-201ENST00000422100 813 ntBASIC2.12□□□□□ -2.07
CXCL1P09341 AL353678.1-201ENST00000422735 741 ntBASIC2.12□□□□□ -2.07
CXCL1P09341 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC2.12□□□□□ -2.07
CXCL1P09341 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC2.12□□□□□ -2.07
CXCL1P09341 RPL7P29-201ENST00000437151 728 ntBASIC2.12□□□□□ -2.07
CXCL1P09341 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.12□□□□□ -2.07
CXCL1P09341 AL513321.1-201ENST00000441175 761 ntBASIC2.12□□□□□ -2.07
CXCL1P09341 RPS26P56-201ENST00000444468 240 ntBASIC2.12□□□□□ -2.07
CXCL1P09341 AC133134.1-201ENST00000466800 359 ntBASIC2.12□□□□□ -2.07
CXCL1P09341 RPL27AP5-201ENST00000469428 449 ntBASIC2.12□□□□□ -2.07
CXCL1P09341 AP000852.1-201ENST00000472460 573 ntBASIC2.12□□□□□ -2.07
CXCL1P09341 RPS3AP43-201ENST00000479743 781 ntBASIC2.12□□□□□ -2.07
CXCL1P09341 AC090543.1-201ENST00000492168 485 ntBASIC2.12□□□□□ -2.07
CXCL1P09341 KATNBL1P4-201ENST00000503545 918 ntBASIC2.12□□□□□ -2.07
CXCL1P09341 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
CXCL1P09341 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.12□□□□□ -2.07
CXCL1P09341 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
CXCL1P09341 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.12□□□□□ -2.07
CXCL1P09341 HPRT1P3-201ENST00000539521 576 ntBASIC2.12□□□□□ -2.07
CXCL1P09341 PRELID2P1-201ENST00000552837 301 ntBASIC2.12□□□□□ -2.07
CXCL1P09341 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.12□□□□□ -2.07
CXCL1P09341 AC093227.2-201ENST00000589357 285 ntBASIC2.12□□□□□ -2.07
CXCL1P09341 AC092474.3-201ENST00000603022 568 ntBASIC2.12□□□□□ -2.07
CXCL1P09341 AC008083.4-201ENST00000615076 444 ntBASIC2.12□□□□□ -2.07
CXCL1P09341 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC2.12□□□□□ -2.07
CXCL1P09341 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.12□□□□□ -2.07
CXCL1P09341 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.11□□□□□ -2.07
CXCL1P09341 AC090740.1-201ENST00000623193 2262 ntBASIC2.11□□□□□ -2.07
CXCL1P09341 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.11□□□□□ -2.07
CXCL1P09341 AL512646.1-201ENST00000269395 1077 ntBASIC2.11□□□□□ -2.07
CXCL1P09341 SNORA63.1-201ENST00000362493 131 ntBASIC2.11□□□□□ -2.07
CXCL1P09341 RNA5SP393-201ENST00000363423 117 ntBASIC2.11□□□□□ -2.07
CXCL1P09341 RNA5SP515-201ENST00000364570 118 ntBASIC2.11□□□□□ -2.07
CXCL1P09341 MIR142-201ENST00000384835 87 ntBASIC2.11□□□□□ -2.07
CXCL1P09341 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC2.11□□□□□ -2.07
CXCL1P09341 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC2.11□□□□□ -2.07
CXCL1P09341 AL513175.1-201ENST00000431492 780 ntBASIC2.11□□□□□ -2.07
CXCL1P09341 HMGN2P31-201ENST00000432430 273 ntBASIC2.11□□□□□ -2.07
CXCL1P09341 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC2.11□□□□□ -2.07
CXCL1P09341 Z75741.1-201ENST00000446793 314 ntBASIC2.11□□□□□ -2.07
CXCL1P09341 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.11□□□□□ -2.07
CXCL1P09341 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC2.11□□□□□ -2.07
CXCL1P09341 RPS29P12-201ENST00000460178 152 ntBASIC2.11□□□□□ -2.07
CXCL1P09341 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.11□□□□□ -2.07
CXCL1P09341 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC2.11□□□□□ -2.07
CXCL1P09341 SUMO1P1-201ENST00000497904 306 ntBASIC2.11□□□□□ -2.07
CXCL1P09341 OR2A20P-203ENST00000498397 1268 ntBASIC2.11□□□□□ -2.07
CXCL1P09341 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC2.11□□□□□ -2.07
CXCL1P09341 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.11□□□□□ -2.07
CXCL1P09341 PRELID3BP5-201ENST00000508612 460 ntBASIC2.11□□□□□ -2.07
CXCL1P09341 AC004062.1-201ENST00000509926 645 ntBASIC2.11□□□□□ -2.07
CXCL1P09341 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.11□□□□□ -2.07
CXCL1P09341 AC107222.1-201ENST00000510899 637 ntBASIC2.11□□□□□ -2.07
CXCL1P09341 RPL7L1P13-201ENST00000511702 739 ntBASIC2.11□□□□□ -2.07
CXCL1P09341 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.11□□□□□ -2.07
CXCL1P09341 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC2.11□□□□□ -2.07
CXCL1P09341 RNU6-491P-201ENST00000516099 110 ntBASIC2.11□□□□□ -2.07
CXCL1P09341 LY96-202ENST00000518893 430 ntTSL 3 BASIC2.11□□□□□ -2.07
CXCL1P09341 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.11□□□□□ -2.07
CXCL1P09341 RGS4-207ENST00000527809 817 ntTSL 4 BASIC2.11□□□□□ -2.07
CXCL1P09341 AP003385.6-201ENST00000531603 374 ntBASIC2.11□□□□□ -2.07
CXCL1P09341 AC123904.3-201ENST00000547218 814 ntBASIC2.11□□□□□ -2.07
CXCL1P09341 CR383656.14-201ENST00000551951 406 ntBASIC2.11□□□□□ -2.07
CXCL1P09341 AL391156.1-201ENST00000554965 554 ntBASIC2.11□□□□□ -2.07
CXCL1P09341 SERPINE4P-201ENST00000554978 281 ntBASIC2.11□□□□□ -2.07
CXCL1P09341 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC2.11□□□□□ -2.07
CXCL1P09341 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC2.11□□□□□ -2.07
CXCL1P09341 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.11□□□□□ -2.07
CXCL1P09341 COX6CP3-201ENST00000580869 223 ntBASIC2.11□□□□□ -2.07
CXCL1P09341 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.11□□□□□ -2.07
CXCL1P09341 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.11□□□□□ -2.07
CXCL1P09341 AL133507.1-201ENST00000605269 557 ntBASIC2.11□□□□□ -2.07
CXCL1P09341 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC2.11□□□□□ -2.07
CXCL1P09341 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.11□□□□□ -2.07
CXCL1P09341 AL138880.2-201ENST00000616214 239 ntBASIC2.11□□□□□ -2.07
CXCL1P09341 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.11□□□□□ -2.07
CXCL1P09341 AC007275.1-201ENST00000621243 671 ntBASIC2.11□□□□□ -2.07
CXCL1P09341 AC039056.2-201ENST00000622261 511 ntBASIC2.11□□□□□ -2.07
CXCL1P09341 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CXCL1P09341 CR392039.5-201ENST00000623201 510 ntBASIC2.11□□□□□ -2.07
CXCL1P09341 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CXCL1P09341 AC099654.7-201ENST00000635788 2127 ntBASIC2.11□□□□□ -2.07
CXCL1P09341 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.11□□□□□ -2.07
CXCL1P09341 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.1□□□□□ -2.07
CXCL1P09341 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.1□□□□□ -2.07
CXCL1P09341 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CXCL1P09341 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.1□□□□□ -2.07
CXCL1P09341 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
CXCL1P09341 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CXCL1P09341 MIR490-201ENST00000384865 128 ntBASIC2.1□□□□□ -2.07
CXCL1P09341 RNA5SP210-201ENST00000391034 120 ntBASIC2.1□□□□□ -2.07
CXCL1P09341 DHFRP5-201ENST00000406944 564 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms