Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.06□□□□□ -1.76
RB1P06400 AC104986.1-201ENST00000517978 436 ntBASIC4.06□□□□□ -1.76
RB1P06400 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.06□□□□□ -1.76
RB1P06400 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.06□□□□□ -1.76
RB1P06400 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC4.06□□□□□ -1.76
RB1P06400 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.06□□□□□ -1.76
RB1P06400 HSPE1P3-201ENST00000559254 309 ntBASIC4.06□□□□□ -1.76
RB1P06400 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.06□□□□□ -1.76
RB1P06400 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC4.06□□□□□ -1.76
RB1P06400 AC245036.5-201ENST00000596330 847 ntBASIC4.06□□□□□ -1.76
RB1P06400 AC244505.7-201ENST00000599675 272 ntBASIC4.06□□□□□ -1.76
RB1P06400 VN1R82P-201ENST00000601481 356 ntBASIC4.06□□□□□ -1.76
RB1P06400 AL355812.1-201ENST00000603215 216 ntBASIC4.06□□□□□ -1.76
RB1P06400 AC008638.3-201ENST00000603341 463 ntBASIC4.06□□□□□ -1.76
RB1P06400 RPL23AP92-201ENST00000603609 255 ntBASIC4.06□□□□□ -1.76
RB1P06400 IGHV3-29-201ENST00000604817 344 ntBASIC4.06□□□□□ -1.76
RB1P06400 AC005000.2-201ENST00000605468 310 ntBASIC4.06□□□□□ -1.76
RB1P06400 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.06□□□□□ -1.76
RB1P06400 AC245297.2-201ENST00000610119 565 ntBASIC4.06□□□□□ -1.76
RB1P06400 AC009159.2-201ENST00000617603 606 ntBASIC4.06□□□□□ -1.76
RB1P06400 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.06□□□□□ -1.76
RB1P06400 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RB1P06400 AL031985.3-201ENST00000565390 2449 ntBASIC4.06□□□□□ -1.76
RB1P06400 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RB1P06400 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
RB1P06400 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
RB1P06400 AC090337.1-201ENST00000579651 2074 ntBASIC4.06□□□□□ -1.76
RB1P06400 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.05□□□□□ -1.76
RB1P06400 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.05□□□□□ -1.76
RB1P06400 RNU6-989P-201ENST00000362756 107 ntBASIC4.05□□□□□ -1.76
RB1P06400 SNORD113-6-201ENST00000363345 75 ntBASIC4.05□□□□□ -1.76
RB1P06400 RNA5SP50-201ENST00000363731 107 ntBASIC4.05□□□□□ -1.76
RB1P06400 RNU6-263P-201ENST00000363811 107 ntBASIC4.05□□□□□ -1.76
RB1P06400 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
RB1P06400 RPL23AP29-201ENST00000397284 453 ntBASIC4.05□□□□□ -1.76
RB1P06400 RPL31P1-201ENST00000398116 372 ntBASIC4.05□□□□□ -1.76
RB1P06400 MIR1284-201ENST00000408337 120 ntBASIC4.05□□□□□ -1.76
RB1P06400 RNU6-757P-201ENST00000410334 100 ntBASIC4.05□□□□□ -1.76
RB1P06400 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.05□□□□□ -1.76
RB1P06400 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.05□□□□□ -1.76
RB1P06400 CYCSP4-201ENST00000429682 331 ntBASIC4.05□□□□□ -1.76
RB1P06400 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC4.05□□□□□ -1.76
RB1P06400 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC4.05□□□□□ -1.76
RB1P06400 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.05□□□□□ -1.76
RB1P06400 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.05□□□□□ -1.76
RB1P06400 RPL23AP74-201ENST00000437246 471 ntBASIC4.05□□□□□ -1.76
RB1P06400 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.05□□□□□ -1.76
RB1P06400 TPTE2P3-201ENST00000441562 1189 ntBASIC4.05□□□□□ -1.76
RB1P06400 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.05□□□□□ -1.76
RB1P06400 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC4.05□□□□□ -1.76
RB1P06400 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.05□□□□□ -1.76
RB1P06400 EXTL2P1-201ENST00000446218 416 ntBASIC4.05□□□□□ -1.76
RB1P06400 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.05□□□□□ -1.76
RB1P06400 RN7SL601P-201ENST00000471221 293 ntBASIC4.05□□□□□ -1.76
RB1P06400 MTND2P14-201ENST00000482139 351 ntBASIC4.05□□□□□ -1.76
RB1P06400 NCOR1P1-202ENST00000486162 291 ntBASIC4.05□□□□□ -1.76
RB1P06400 AC114981.1-201ENST00000503897 678 ntBASIC4.05□□□□□ -1.76
RB1P06400 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.05□□□□□ -1.76
RB1P06400 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.05□□□□□ -1.76
RB1P06400 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.05□□□□□ -1.76
RB1P06400 AC023538.1-201ENST00000534576 736 ntBASIC4.05□□□□□ -1.76
RB1P06400 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC4.05□□□□□ -1.76
RB1P06400 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
RB1P06400 AC007599.1-201ENST00000568688 1174 ntBASIC4.05□□□□□ -1.76
RB1P06400 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.05□□□□□ -1.76
RB1P06400 AL354943.1-201ENST00000572103 781 ntBASIC4.05□□□□□ -1.76
RB1P06400 AL139395.1-201ENST00000603662 160 ntBASIC4.05□□□□□ -1.76
RB1P06400 AC010591.1-201ENST00000603941 649 ntBASIC4.05□□□□□ -1.76
RB1P06400 DPRXP5-201ENST00000604662 539 ntBASIC4.05□□□□□ -1.76
RB1P06400 AL592221.1-201ENST00000605266 382 ntBASIC4.05□□□□□ -1.76
RB1P06400 AC006270.3-201ENST00000605967 1036 ntBASIC4.05□□□□□ -1.76
RB1P06400 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.05□□□□□ -1.76
RB1P06400 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.05□□□□□ -1.76
RB1P06400 MIR3651-201ENST00000630427 90 ntBASIC4.05□□□□□ -1.76
RB1P06400 EXOC5P1-201ENST00000510543 1969 ntBASIC4.05□□□□□ -1.76
RB1P06400 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.05□□□□□ -1.76
RB1P06400 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RB1P06400 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
RB1P06400 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
RB1P06400 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.04□□□□□ -1.76
RB1P06400 OR5BR1P-201ENST00000524992 1330 ntBASIC4.04□□□□□ -1.76
RB1P06400 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
RB1P06400 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.04□□□□□ -1.76
RB1P06400 RHOT1P2-201ENST00000366423 333 ntBASIC4.04□□□□□ -1.76
RB1P06400 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.04□□□□□ -1.76
RB1P06400 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.04□□□□□ -1.76
RB1P06400 AL049610.1-201ENST00000423374 372 ntBASIC4.04□□□□□ -1.76
RB1P06400 MTND4P6-201ENST00000438297 472 ntBASIC4.04□□□□□ -1.76
RB1P06400 HMGN2P21-201ENST00000447764 270 ntBASIC4.04□□□□□ -1.76
RB1P06400 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC4.04□□□□□ -1.76
RB1P06400 USP9YP34-201ENST00000453983 808 ntBASIC4.04□□□□□ -1.76
RB1P06400 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.04□□□□□ -1.76
RB1P06400 SYPL1P1-201ENST00000473622 768 ntBASIC4.04□□□□□ -1.76
RB1P06400 HSPD1P15-201ENST00000505573 1122 ntBASIC4.04□□□□□ -1.76
RB1P06400 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
RB1P06400 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.04□□□□□ -1.76
RB1P06400 XKRY-201ENST00000510392 1100 ntBASIC4.04□□□□□ -1.76
RB1P06400 AC023141.12-201ENST00000512399 199 ntBASIC4.04□□□□□ -1.76
RB1P06400 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.04□□□□□ -1.76
RB1P06400 AC105185.1-201ENST00000518705 535 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms