Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AP001350.1-201ENST00000601906 1524 ntBASIC2.97□□□□□ -1.93
APOEP02649 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
APOEP02649 GABRG2-229ENST00000641017 3628 ntBASIC2.97□□□□□ -1.93
APOEP02649 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
APOEP02649 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.96□□□□□ -1.93
APOEP02649 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
APOEP02649 RNU1-35P-201ENST00000362782 153 ntBASIC2.96□□□□□ -1.94
APOEP02649 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
APOEP02649 MIR512-1-201ENST00000384913 84 ntBASIC2.96□□□□□ -1.94
APOEP02649 EIF5P1-201ENST00000400019 1231 ntBASIC2.96□□□□□ -1.94
APOEP02649 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
APOEP02649 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC2.96□□□□□ -1.94
APOEP02649 AL645937.1-202ENST00000421799 937 ntBASIC2.96□□□□□ -1.94
APOEP02649 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.96□□□□□ -1.94
APOEP02649 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.96□□□□□ -1.94
APOEP02649 XKRYP6-201ENST00000440468 1116 ntBASIC2.96□□□□□ -1.94
APOEP02649 XKRYP3-201ENST00000442113 1116 ntBASIC2.96□□□□□ -1.94
APOEP02649 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.96□□□□□ -1.94
APOEP02649 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC2.96□□□□□ -1.94
APOEP02649 SUMO1P1-201ENST00000497904 306 ntBASIC2.96□□□□□ -1.94
APOEP02649 AC111193.1-201ENST00000504097 155 ntBASIC2.96□□□□□ -1.94
APOEP02649 GMPSP1-201ENST00000514075 579 ntBASIC2.96□□□□□ -1.94
APOEP02649 RNU6-711P-201ENST00000517255 106 ntBASIC2.96□□□□□ -1.94
APOEP02649 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.96□□□□□ -1.94
APOEP02649 LY96-202ENST00000518893 430 ntTSL 3 BASIC2.96□□□□□ -1.94
APOEP02649 AC008562.1-201ENST00000521763 330 ntBASIC2.96□□□□□ -1.94
APOEP02649 COX6B1P6-201ENST00000522347 255 ntBASIC2.96□□□□□ -1.94
APOEP02649 AC010306.1-201ENST00000523223 1117 ntBASIC2.96□□□□□ -1.94
APOEP02649 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.96□□□□□ -1.94
APOEP02649 IGHV3-29-201ENST00000604817 344 ntBASIC2.96□□□□□ -1.94
APOEP02649 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
APOEP02649 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
APOEP02649 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
APOEP02649 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.95□□□□□ -1.94
APOEP02649 AC073055.1-201ENST00000456901 1621 ntBASIC2.95□□□□□ -1.94
APOEP02649 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.95□□□□□ -1.94
APOEP02649 RPL9P7-201ENST00000330965 580 ntBASIC2.95□□□□□ -1.94
APOEP02649 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
APOEP02649 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.95□□□□□ -1.94
APOEP02649 MIR23A-201ENST00000385245 73 ntBASIC2.95□□□□□ -1.94
APOEP02649 MIR1303-201ENST00000408625 86 ntBASIC2.95□□□□□ -1.94
APOEP02649 HSFY1P1-201ENST00000423928 1178 ntBASIC2.95□□□□□ -1.94
APOEP02649 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.95□□□□□ -1.94
APOEP02649 AC093156.1-201ENST00000440382 670 ntBASIC2.95□□□□□ -1.94
APOEP02649 AL831737.1-201ENST00000441288 271 ntBASIC2.95□□□□□ -1.94
APOEP02649 RPS24P13-201ENST00000442520 397 ntBASIC2.95□□□□□ -1.94
APOEP02649 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.95□□□□□ -1.94
APOEP02649 AC126121.1-201ENST00000482313 553 ntBASIC2.95□□□□□ -1.94
APOEP02649 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
APOEP02649 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.95□□□□□ -1.94
APOEP02649 HMGB1P22-201ENST00000505315 124 ntBASIC2.95□□□□□ -1.94
APOEP02649 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC2.95□□□□□ -1.94
APOEP02649 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.95□□□□□ -1.94
APOEP02649 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.95□□□□□ -1.94
APOEP02649 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.95□□□□□ -1.94
APOEP02649 EIF4BP1-201ENST00000554881 351 ntBASIC2.95□□□□□ -1.94
APOEP02649 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
APOEP02649 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.95□□□□□ -1.94
APOEP02649 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
APOEP02649 AC090115.4-201ENST00000609970 188 ntBASIC2.95□□□□□ -1.94
APOEP02649 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
APOEP02649 MIR7106-201ENST00000612419 65 ntBASIC2.95□□□□□ -1.94
APOEP02649 AC010338.1-201ENST00000621823 717 ntBASIC2.95□□□□□ -1.94
APOEP02649 AC006111.3-201ENST00000622137 383 ntBASIC2.95□□□□□ -1.94
APOEP02649 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
APOEP02649 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.95□□□□□ -1.94
APOEP02649 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.95□□□□□ -1.94
APOEP02649 AL645568.2-201ENST00000432815 1337 ntBASIC2.94□□□□□ -1.94
APOEP02649 MAPK10-322ENST00000641485 4530 ntBASIC2.94□□□□□ -1.94
APOEP02649 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.94□□□□□ -1.94
APOEP02649 RNU6-152P-201ENST00000384037 107 ntBASIC2.94□□□□□ -1.94
APOEP02649 U3.26-201ENST00000391236 204 ntBASIC2.94□□□□□ -1.94
APOEP02649 RAP1BP1-201ENST00000412709 553 ntBASIC2.94□□□□□ -1.94
APOEP02649 ATG3P1-201ENST00000419507 911 ntBASIC2.94□□□□□ -1.94
APOEP02649 USP9YP36-201ENST00000424581 829 ntBASIC2.94□□□□□ -1.94
APOEP02649 AL135938.1-201ENST00000443141 297 ntBASIC2.94□□□□□ -1.94
APOEP02649 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.94□□□□□ -1.94
APOEP02649 NDUFAF4P2-201ENST00000445374 520 ntBASIC2.94□□□□□ -1.94
APOEP02649 AP002345.1-201ENST00000456493 928 ntBASIC2.94□□□□□ -1.94
APOEP02649 NFU1-207ENST00000462320 558 ntTSL 4 BASIC2.94□□□□□ -1.94
APOEP02649 RPS27AP9-201ENST00000477681 438 ntBASIC2.94□□□□□ -1.94
APOEP02649 AC025459.1-201ENST00000504072 156 ntBASIC2.94□□□□□ -1.94
APOEP02649 AC117522.3-201ENST00000507974 584 ntBASIC2.94□□□□□ -1.94
APOEP02649 HIGD1AP13-201ENST00000509878 289 ntBASIC2.94□□□□□ -1.94
APOEP02649 MTCO2P32-201ENST00000514865 403 ntBASIC2.94□□□□□ -1.94
APOEP02649 RNA5SP76-201ENST00000516277 87 ntBASIC2.94□□□□□ -1.94
APOEP02649 RNA5SP367-201ENST00000516557 118 ntBASIC2.94□□□□□ -1.94
APOEP02649 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC2.94□□□□□ -1.94
APOEP02649 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.94□□□□□ -1.94
APOEP02649 AP004371.1-201ENST00000525240 214 ntBASIC2.94□□□□□ -1.94
APOEP02649 RGS4-207ENST00000527809 817 ntTSL 4 BASIC2.94□□□□□ -1.94
APOEP02649 AC109635.4-202ENST00000531666 412 ntBASIC2.94□□□□□ -1.94
APOEP02649 HPRT1P3-201ENST00000539521 576 ntBASIC2.94□□□□□ -1.94
APOEP02649 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.94□□□□□ -1.94
APOEP02649 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.94□□□□□ -1.94
APOEP02649 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC2.94□□□□□ -1.94
APOEP02649 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC2.94□□□□□ -1.94
APOEP02649 AADACP1-206ENST00000561502 1193 ntBASIC2.94□□□□□ -1.94
APOEP02649 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC2.94□□□□□ -1.94
APOEP02649 AC011471.1-201ENST00000585766 187 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms