Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.88□□□□□ -1.79
LDLRP01130 AC011352.1-201ENST00000512300 793 ntBASIC3.88□□□□□ -1.79
LDLRP01130 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
LDLRP01130 AC016065.2-201ENST00000514530 444 ntBASIC3.88□□□□□ -1.79
LDLRP01130 RNA5SP49-201ENST00000516450 115 ntBASIC3.88□□□□□ -1.79
LDLRP01130 RN7SKP277-201ENST00000516895 283 ntBASIC3.88□□□□□ -1.79
LDLRP01130 SLC2A13P1-201ENST00000531560 322 ntBASIC3.88□□□□□ -1.79
LDLRP01130 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.88□□□□□ -1.79
LDLRP01130 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.88□□□□□ -1.79
LDLRP01130 AC023161.2-201ENST00000551218 780 ntBASIC3.88□□□□□ -1.79
LDLRP01130 LSM6P2-201ENST00000552208 177 ntBASIC3.88□□□□□ -1.79
LDLRP01130 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.88□□□□□ -1.79
LDLRP01130 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
LDLRP01130 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.88□□□□□ -1.79
LDLRP01130 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.88□□□□□ -1.79
LDLRP01130 AP001981.2-201ENST00000603241 418 ntBASIC3.88□□□□□ -1.79
LDLRP01130 YWHAQP7-201ENST00000603536 658 ntBASIC3.88□□□□□ -1.79
LDLRP01130 AC064872.1-201ENST00000604823 1072 ntBASIC3.88□□□□□ -1.79
LDLRP01130 AC124312.4-201ENST00000605533 310 ntBASIC3.88□□□□□ -1.79
LDLRP01130 AC006270.3-201ENST00000605967 1036 ntBASIC3.88□□□□□ -1.79
LDLRP01130 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.88□□□□□ -1.79
LDLRP01130 AC245297.2-201ENST00000610119 565 ntBASIC3.88□□□□□ -1.79
LDLRP01130 AL607023.1-201ENST00000620045 248 ntBASIC3.88□□□□□ -1.79
LDLRP01130 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.88□□□□□ -1.79
LDLRP01130 FAM157B-203ENST00000639350 358 ntBASIC3.88□□□□□ -1.79
LDLRP01130 OR5BE1P-202ENST00000641168 1176 ntBASIC3.88□□□□□ -1.79
LDLRP01130 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.88□□□□□ -1.79
LDLRP01130 AL161912.2-201ENST00000565707 3007 ntBASIC3.88□□□□□ -1.79
LDLRP01130 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
LDLRP01130 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.88□□□□□ -1.79
LDLRP01130 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
LDLRP01130 IPO8P1-201ENST00000455509 3109 ntBASIC3.88□□□□□ -1.79
LDLRP01130 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.87□□□□□ -1.79
LDLRP01130 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
LDLRP01130 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LDLRP01130 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.87□□□□□ -1.79
LDLRP01130 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
LDLRP01130 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LDLRP01130 RNU6-216P-201ENST00000363282 104 ntBASIC3.87□□□□□ -1.79
LDLRP01130 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.87□□□□□ -1.79
LDLRP01130 SNORA9-201ENST00000384215 133 ntBASIC3.87□□□□□ -1.79
LDLRP01130 MIR7-3-201ENST00000384898 110 ntBASIC3.87□□□□□ -1.79
LDLRP01130 BTBD10P2-201ENST00000404779 676 ntBASIC3.87□□□□□ -1.79
LDLRP01130 AL023807.1-201ENST00000407932 359 ntBASIC3.87□□□□□ -1.79
LDLRP01130 AC108032.1-201ENST00000416706 207 ntBASIC3.87□□□□□ -1.79
LDLRP01130 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.87□□□□□ -1.79
LDLRP01130 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.87□□□□□ -1.79
LDLRP01130 AL354941.1-201ENST00000438600 464 ntBASIC3.87□□□□□ -1.79
LDLRP01130 MTCYBP34-201ENST00000439552 670 ntBASIC3.87□□□□□ -1.79
LDLRP01130 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.87□□□□□ -1.79
LDLRP01130 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.87□□□□□ -1.79
LDLRP01130 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.87□□□□□ -1.79
LDLRP01130 AL109741.2-201ENST00000455561 343 ntBASIC3.87□□□□□ -1.79
LDLRP01130 AP000873.1-201ENST00000463987 400 ntBASIC3.87□□□□□ -1.79
LDLRP01130 RPL7P49-201ENST00000471402 708 ntBASIC3.87□□□□□ -1.79
LDLRP01130 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.87□□□□□ -1.79
LDLRP01130 MTCYBP17-201ENST00000503579 789 ntBASIC3.87□□□□□ -1.79
LDLRP01130 RPF2P2-201ENST00000504693 896 ntBASIC3.87□□□□□ -1.79
LDLRP01130 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
LDLRP01130 MTCO3P7-201ENST00000510008 774 ntBASIC3.87□□□□□ -1.79
LDLRP01130 XKRY-201ENST00000510392 1100 ntBASIC3.87□□□□□ -1.79
LDLRP01130 FTH1P21-201ENST00000512179 511 ntBASIC3.87□□□□□ -1.79
LDLRP01130 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.87□□□□□ -1.79
LDLRP01130 MTCO2P32-201ENST00000514865 403 ntBASIC3.87□□□□□ -1.79
LDLRP01130 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.87□□□□□ -1.79
LDLRP01130 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.87□□□□□ -1.79
LDLRP01130 AC022880.1-201ENST00000534017 973 ntBASIC3.87□□□□□ -1.79
LDLRP01130 AC007115.1-201ENST00000546853 234 ntBASIC3.87□□□□□ -1.79
LDLRP01130 SULT1C2P1-202ENST00000562418 459 ntBASIC3.87□□□□□ -1.79
LDLRP01130 AL512347.1-201ENST00000566420 503 ntBASIC3.87□□□□□ -1.79
LDLRP01130 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC3.87□□□□□ -1.79
LDLRP01130 LLPHP1-201ENST00000603571 367 ntBASIC3.87□□□□□ -1.79
LDLRP01130 AC112230.1-201ENST00000604342 547 ntBASIC3.87□□□□□ -1.79
LDLRP01130 AL021997.1-201ENST00000605757 193 ntBASIC3.87□□□□□ -1.79
LDLRP01130 AC068722.2-201ENST00000618734 544 ntBASIC3.87□□□□□ -1.79
LDLRP01130 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.87□□□□□ -1.79
LDLRP01130 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.87□□□□□ -1.79
LDLRP01130 AC090582.1-201ENST00000636321 199 ntBASIC3.87□□□□□ -1.79
LDLRP01130 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LDLRP01130 AP001486.2-201ENST00000561652 5113 ntBASIC3.87□□□□□ -1.79
LDLRP01130 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.87□□□□□ -1.79
LDLRP01130 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LDLRP01130 AP000526.1-201ENST00000603308 1388 ntBASIC3.87□□□□□ -1.79
LDLRP01130 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
LDLRP01130 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LDLRP01130 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
LDLRP01130 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LDLRP01130 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LDLRP01130 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LDLRP01130 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
LDLRP01130 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
LDLRP01130 OR11H4-201ENST00000315409 1082 ntBASIC3.86□□□□□ -1.79
LDLRP01130 SNRPEP3-201ENST00000338402 276 ntBASIC3.86□□□□□ -1.79
LDLRP01130 RNU6-1122P-201ENST00000384449 107 ntBASIC3.86□□□□□ -1.79
LDLRP01130 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.86□□□□□ -1.79
LDLRP01130 SSXP10-201ENST00000402595 565 ntBASIC3.86□□□□□ -1.79
LDLRP01130 AL021407.1-201ENST00000404531 386 ntBASIC3.86□□□□□ -1.79
LDLRP01130 AC022028.1-201ENST00000412054 408 ntBASIC3.86□□□□□ -1.79
LDLRP01130 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.86□□□□□ -1.79
LDLRP01130 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms