Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 SEC63P2-201ENST00000503863 1939 ntBASIC2.46□□□□□ -2.02
SSNA1O43805 AL049780.3-201ENST00000624612 1583 ntBASIC2.46□□□□□ -2.02
SSNA1O43805 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC2.46□□□□□ -2.02
SSNA1O43805 U8.11-201ENST00000384699 133 ntBASIC2.46□□□□□ -2.02
SSNA1O43805 U8.12-201ENST00000384701 133 ntBASIC2.46□□□□□ -2.02
SSNA1O43805 METTL5-204ENST00000409340 472 ntTSL 5 BASIC2.46□□□□□ -2.02
SSNA1O43805 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.46□□□□□ -2.02
SSNA1O43805 AC092638.1-201ENST00000411966 1275 ntBASIC2.46□□□□□ -2.02
SSNA1O43805 RPS15AP38-201ENST00000413110 372 ntBASIC2.46□□□□□ -2.02
SSNA1O43805 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.46□□□□□ -2.02
SSNA1O43805 AC099677.1-201ENST00000420575 175 ntBASIC2.46□□□□□ -2.02
SSNA1O43805 AL353678.1-201ENST00000422735 741 ntBASIC2.46□□□□□ -2.02
SSNA1O43805 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.46□□□□□ -2.02
SSNA1O43805 AC127537.2-201ENST00000439258 465 ntBASIC2.46□□□□□ -2.02
SSNA1O43805 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC2.46□□□□□ -2.02
SSNA1O43805 SNRPGP6-201ENST00000451124 220 ntBASIC2.46□□□□□ -2.02
SSNA1O43805 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC2.46□□□□□ -2.02
SSNA1O43805 U8.18-201ENST00000459285 133 ntBASIC2.46□□□□□ -2.02
SSNA1O43805 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.46□□□□□ -2.02
SSNA1O43805 PRELID3BP6-201ENST00000503839 571 ntBASIC2.46□□□□□ -2.02
SSNA1O43805 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
SSNA1O43805 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.46□□□□□ -2.02
SSNA1O43805 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.46□□□□□ -2.02
SSNA1O43805 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.46□□□□□ -2.02
SSNA1O43805 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC2.46□□□□□ -2.02
SSNA1O43805 RGS5-218ENST00000526176 574 ntTSL 4 BASIC2.46□□□□□ -2.02
SSNA1O43805 AL133271.1-201ENST00000538229 291 ntBASIC2.46□□□□□ -2.02
SSNA1O43805 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC2.46□□□□□ -2.02
SSNA1O43805 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC2.46□□□□□ -2.02
SSNA1O43805 MED28P6-201ENST00000558776 231 ntBASIC2.46□□□□□ -2.02
SSNA1O43805 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC2.46□□□□□ -2.02
SSNA1O43805 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.46□□□□□ -2.02
SSNA1O43805 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.46□□□□□ -2.02
SSNA1O43805 MIR4286-201ENST00000580651 93 ntBASIC2.46□□□□□ -2.02
SSNA1O43805 AC010620.2-201ENST00000600135 313 ntBASIC2.46□□□□□ -2.02
SSNA1O43805 AC019159.1-201ENST00000605094 187 ntBASIC2.46□□□□□ -2.02
SSNA1O43805 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
SSNA1O43805 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC2.46□□□□□ -2.02
SSNA1O43805 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.46□□□□□ -2.02
SSNA1O43805 AC068722.2-201ENST00000618734 544 ntBASIC2.46□□□□□ -2.02
SSNA1O43805 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC2.46□□□□□ -2.02
SSNA1O43805 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.46□□□□□ -2.02
SSNA1O43805 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
SSNA1O43805 AC138915.1-201ENST00000565427 1685 ntBASIC2.46□□□□□ -2.02
SSNA1O43805 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.45□□□□□ -2.02
SSNA1O43805 MTCO1P18-201ENST00000455518 1419 ntBASIC2.45□□□□□ -2.02
SSNA1O43805 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.45□□□□□ -2.02
SSNA1O43805 AL672167.1-206ENST00000356293 943 ntBASIC2.45□□□□□ -2.02
SSNA1O43805 RNU5D-1-201ENST00000363299 116 ntBASIC2.45□□□□□ -2.02
SSNA1O43805 RNA5SP139-201ENST00000364340 117 ntBASIC2.45□□□□□ -2.02
SSNA1O43805 RNU6-1180P-201ENST00000364935 107 ntBASIC2.45□□□□□ -2.02
SSNA1O43805 RNU1-13P-201ENST00000384499 162 ntBASIC2.45□□□□□ -2.02
SSNA1O43805 MIR649-201ENST00000384843 97 ntBASIC2.45□□□□□ -2.02
SSNA1O43805 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
SSNA1O43805 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
SSNA1O43805 TEX41-203ENST00000420472 765 ntTSL 3 BASIC2.45□□□□□ -2.02
SSNA1O43805 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.45□□□□□ -2.02
SSNA1O43805 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC2.45□□□□□ -2.02
SSNA1O43805 AC091862.1-201ENST00000438016 1100 ntBASIC2.45□□□□□ -2.02
SSNA1O43805 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC2.45□□□□□ -2.02
SSNA1O43805 AC122718.1-201ENST00000439448 744 ntBASIC2.45□□□□□ -2.02
SSNA1O43805 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC2.45□□□□□ -2.02
SSNA1O43805 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC2.45□□□□□ -2.02
SSNA1O43805 AC027673.1-201ENST00000456245 405 ntBASIC2.45□□□□□ -2.02
SSNA1O43805 SETP11-201ENST00000473027 690 ntBASIC2.45□□□□□ -2.02
SSNA1O43805 RPL32P9-201ENST00000487963 407 ntBASIC2.45□□□□□ -2.02
SSNA1O43805 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.45□□□□□ -2.02
SSNA1O43805 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC2.45□□□□□ -2.02
SSNA1O43805 SNORA31.15-201ENST00000516771 132 ntBASIC2.45□□□□□ -2.02
SSNA1O43805 AC018630.1-201ENST00000541376 925 ntBASIC2.45□□□□□ -2.02
SSNA1O43805 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.45□□□□□ -2.02
SSNA1O43805 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.45□□□□□ -2.02
SSNA1O43805 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.45□□□□□ -2.02
SSNA1O43805 AC138761.3-201ENST00000579993 334 ntBASIC2.45□□□□□ -2.02
SSNA1O43805 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.45□□□□□ -2.02
SSNA1O43805 AC008739.2-201ENST00000597006 317 ntBASIC2.45□□□□□ -2.02
SSNA1O43805 AC068790.4-201ENST00000602474 263 ntBASIC2.45□□□□□ -2.02
SSNA1O43805 AC069200.1-201ENST00000609511 323 ntBASIC2.45□□□□□ -2.02
SSNA1O43805 AC100793.4-201ENST00000613683 429 ntBASIC2.45□□□□□ -2.02
SSNA1O43805 MLECP1-201ENST00000615893 709 ntBASIC2.45□□□□□ -2.02
SSNA1O43805 FRG1HP-204ENST00000617940 757 ntBASIC2.45□□□□□ -2.02
SSNA1O43805 MIR6729-201ENST00000618194 65 ntBASIC2.45□□□□□ -2.02
SSNA1O43805 AC079228.1-201ENST00000624774 1049 ntBASIC2.45□□□□□ -2.02
SSNA1O43805 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
SSNA1O43805 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.45□□□□□ -2.02
SSNA1O43805 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC2.45□□□□□ -2.02
SSNA1O43805 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
SSNA1O43805 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SSNA1O43805 RNA5SP27-201ENST00000363839 119 ntBASIC2.44□□□□□ -2.02
SSNA1O43805 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
SSNA1O43805 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC2.44□□□□□ -2.02
SSNA1O43805 AL359837.1-201ENST00000381357 287 ntBASIC2.44□□□□□ -2.02
SSNA1O43805 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.44□□□□□ -2.02
SSNA1O43805 BX323014.1-201ENST00000412876 237 ntBASIC2.44□□□□□ -2.02
SSNA1O43805 AC092447.6-201ENST00000414578 210 ntBASIC2.44□□□□□ -2.02
SSNA1O43805 AL513477.1-202ENST00000417061 214 ntBASIC2.44□□□□□ -2.02
SSNA1O43805 AL137014.1-201ENST00000420490 1226 ntBASIC2.44□□□□□ -2.02
SSNA1O43805 AC009237.2-201ENST00000421358 284 ntBASIC2.44□□□□□ -2.02
SSNA1O43805 RPL23AP74-201ENST00000437246 471 ntBASIC2.44□□□□□ -2.02
SSNA1O43805 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms