Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 COX6CP8-201ENST00000522620 226 ntBASIC4.47□□□□□ -1.69
TRIM38O00635 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.47□□□□□ -1.69
TRIM38O00635 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.47□□□□□ -1.69
TRIM38O00635 AP000827.1-201ENST00000527814 258 ntBASIC4.47□□□□□ -1.69
TRIM38O00635 CYCSP29-201ENST00000533731 318 ntBASIC4.47□□□□□ -1.69
TRIM38O00635 AC068587.4-201ENST00000533893 186 ntBASIC4.47□□□□□ -1.69
TRIM38O00635 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.47□□□□□ -1.69
TRIM38O00635 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
TRIM38O00635 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
TRIM38O00635 AC011260.1-201ENST00000578420 472 ntBASIC4.47□□□□□ -1.69
TRIM38O00635 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC4.47□□□□□ -1.69
TRIM38O00635 AC091178.1-203ENST00000584586 279 ntBASIC4.47□□□□□ -1.69
TRIM38O00635 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.47□□□□□ -1.69
TRIM38O00635 Z99129.1-201ENST00000612510 255 ntBASIC4.47□□□□□ -1.69
TRIM38O00635 AC026368.1-201ENST00000614934 690 ntBASIC4.47□□□□□ -1.69
TRIM38O00635 AC092794.2-201ENST00000620933 563 ntBASIC4.47□□□□□ -1.69
TRIM38O00635 AC095031.1-201ENST00000623685 672 ntBASIC4.47□□□□□ -1.69
TRIM38O00635 CR381572.1-201ENST00000625098 102 ntBASIC4.47□□□□□ -1.69
TRIM38O00635 SEPT14P19-203ENST00000633205 211 ntBASIC4.47□□□□□ -1.69
TRIM38O00635 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.47□□□□□ -1.69
TRIM38O00635 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
TRIM38O00635 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
TRIM38O00635 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.46□□□□□ -1.69
TRIM38O00635 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
TRIM38O00635 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.46□□□□□ -1.7
TRIM38O00635 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TRIM38O00635 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TRIM38O00635 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
TRIM38O00635 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
TRIM38O00635 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.46□□□□□ -1.7
TRIM38O00635 MIR124-3-201ENST00000384866 87 ntBASIC4.46□□□□□ -1.7
TRIM38O00635 AL031577.2-201ENST00000404133 280 ntBASIC4.46□□□□□ -1.7
TRIM38O00635 RN7SKP27-201ENST00000410684 333 ntBASIC4.46□□□□□ -1.7
TRIM38O00635 RN7SKP167-201ENST00000411047 285 ntBASIC4.46□□□□□ -1.7
TRIM38O00635 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TRIM38O00635 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC4.46□□□□□ -1.7
TRIM38O00635 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.46□□□□□ -1.7
TRIM38O00635 MTATP6P27-201ENST00000416987 621 ntBASIC4.46□□□□□ -1.7
TRIM38O00635 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.46□□□□□ -1.7
TRIM38O00635 RAD23BP1-201ENST00000421404 1227 ntBASIC4.46□□□□□ -1.7
TRIM38O00635 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC4.46□□□□□ -1.7
TRIM38O00635 NUTF2P3-201ENST00000448540 384 ntBASIC4.46□□□□□ -1.7
TRIM38O00635 AL162388.1-201ENST00000450912 352 ntBASIC4.46□□□□□ -1.7
TRIM38O00635 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TRIM38O00635 RPL31P50-201ENST00000471002 296 ntBASIC4.46□□□□□ -1.7
TRIM38O00635 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.46□□□□□ -1.7
TRIM38O00635 AC041039.1-201ENST00000485656 536 ntBASIC4.46□□□□□ -1.7
TRIM38O00635 RPS6P4-201ENST00000494693 758 ntBASIC4.46□□□□□ -1.7
TRIM38O00635 AC093824.1-201ENST00000508796 343 ntBASIC4.46□□□□□ -1.7
TRIM38O00635 AC024589.1-201ENST00000512207 263 ntBASIC4.46□□□□□ -1.7
TRIM38O00635 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.46□□□□□ -1.7
TRIM38O00635 MTCO1P35-201ENST00000515270 228 ntBASIC4.46□□□□□ -1.7
TRIM38O00635 MYL12AP1-201ENST00000518490 515 ntBASIC4.46□□□□□ -1.7
TRIM38O00635 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC4.46□□□□□ -1.7
TRIM38O00635 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC4.46□□□□□ -1.7
TRIM38O00635 AP000873.5-201ENST00000533906 236 ntBASIC4.46□□□□□ -1.7
TRIM38O00635 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4.46□□□□□ -1.7
TRIM38O00635 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.46□□□□□ -1.7
TRIM38O00635 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
TRIM38O00635 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC4.46□□□□□ -1.7
TRIM38O00635 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC4.46□□□□□ -1.7
TRIM38O00635 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.46□□□□□ -1.7
TRIM38O00635 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.46□□□□□ -1.7
TRIM38O00635 MTND1P15-201ENST00000579262 949 ntBASIC4.46□□□□□ -1.7
TRIM38O00635 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.46□□□□□ -1.7
TRIM38O00635 BNIP3P33-201ENST00000598912 569 ntBASIC4.46□□□□□ -1.7
TRIM38O00635 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.46□□□□□ -1.7
TRIM38O00635 AL158211.4-201ENST00000606988 584 ntBASIC4.46□□□□□ -1.7
TRIM38O00635 AC015813.4-201ENST00000610469 179 ntBASIC4.46□□□□□ -1.7
TRIM38O00635 MIR7844-201ENST00000616161 122 ntBASIC4.46□□□□□ -1.7
TRIM38O00635 AL445567.2-201ENST00000618935 498 ntBASIC4.46□□□□□ -1.7
TRIM38O00635 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC4.46□□□□□ -1.7
TRIM38O00635 AL023881.1-201ENST00000621088 301 ntBASIC4.46□□□□□ -1.7
TRIM38O00635 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC4.46□□□□□ -1.7
TRIM38O00635 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
TRIM38O00635 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
TRIM38O00635 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
TRIM38O00635 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TRIM38O00635 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
TRIM38O00635 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
TRIM38O00635 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
TRIM38O00635 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
TRIM38O00635 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.46□□□□□ -1.7
TRIM38O00635 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.46□□□□□ -1.7
TRIM38O00635 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM38O00635 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM38O00635 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.45□□□□□ -1.7
TRIM38O00635 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM38O00635 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.45□□□□□ -1.7
TRIM38O00635 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
TRIM38O00635 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM38O00635 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
TRIM38O00635 MIR448-201ENST00000362131 111 ntBASIC4.45□□□□□ -1.7
TRIM38O00635 RNA5SP52-201ENST00000362448 134 ntBASIC4.45□□□□□ -1.7
TRIM38O00635 RNU6-433P-201ENST00000363216 104 ntBASIC4.45□□□□□ -1.7
TRIM38O00635 SNORA70C-201ENST00000384538 135 ntBASIC4.45□□□□□ -1.7
TRIM38O00635 RNU6-821P-201ENST00000390995 107 ntBASIC4.45□□□□□ -1.7
TRIM38O00635 SNORA57.1-201ENST00000391227 145 ntBASIC4.45□□□□□ -1.7
TRIM38O00635 RN7SKP266-201ENST00000410232 287 ntBASIC4.45□□□□□ -1.7
TRIM38O00635 RN7SKP142-201ENST00000411236 328 ntBASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms