Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 RNA5SP189-201ENST00000364920 115 ntBASIC2.12□□□□□ -2.07
HMGN4O00479 U3.26-201ENST00000391236 204 ntBASIC2.12□□□□□ -2.07
HMGN4O00479 AL356057.1-202ENST00000402263 756 ntBASIC2.12□□□□□ -2.07
HMGN4O00479 DHFRP5-201ENST00000406944 564 ntBASIC2.12□□□□□ -2.07
HMGN4O00479 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.12□□□□□ -2.07
HMGN4O00479 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.12□□□□□ -2.07
HMGN4O00479 ELOCP6-201ENST00000429066 328 ntBASIC2.12□□□□□ -2.07
HMGN4O00479 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC2.12□□□□□ -2.07
HMGN4O00479 ELOCP12-201ENST00000458706 328 ntBASIC2.12□□□□□ -2.07
HMGN4O00479 AC012181.1-201ENST00000479895 423 ntBASIC2.12□□□□□ -2.07
HMGN4O00479 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC2.12□□□□□ -2.07
HMGN4O00479 AL024509.2-201ENST00000493462 493 ntBASIC2.12□□□□□ -2.07
HMGN4O00479 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.12□□□□□ -2.07
HMGN4O00479 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.12□□□□□ -2.07
HMGN4O00479 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC2.12□□□□□ -2.07
HMGN4O00479 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
HMGN4O00479 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.12□□□□□ -2.07
HMGN4O00479 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
HMGN4O00479 AC005336.3-201ENST00000623833 2679 ntBASIC2.12□□□□□ -2.07
HMGN4O00479 AC110774.1-201ENST00000623567 2018 ntBASIC2.12□□□□□ -2.07
HMGN4O00479 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
HMGN4O00479 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.11□□□□□ -2.07
HMGN4O00479 ZNF720P1-201ENST00000562403 1939 ntBASIC2.11□□□□□ -2.07
HMGN4O00479 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.11□□□□□ -2.07
HMGN4O00479 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
HMGN4O00479 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.11□□□□□ -2.07
HMGN4O00479 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.11□□□□□ -2.07
HMGN4O00479 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
HMGN4O00479 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC2.11□□□□□ -2.07
HMGN4O00479 AL031679.1-201ENST00000400616 525 ntBASIC2.11□□□□□ -2.07
HMGN4O00479 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.11□□□□□ -2.07
HMGN4O00479 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.11□□□□□ -2.07
HMGN4O00479 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.11□□□□□ -2.07
HMGN4O00479 TRBV8-1-201ENST00000481590 279 ntBASIC2.11□□□□□ -2.07
HMGN4O00479 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC2.11□□□□□ -2.07
HMGN4O00479 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.11□□□□□ -2.07
HMGN4O00479 MTND4LP22-201ENST00000508209 276 ntBASIC2.11□□□□□ -2.07
HMGN4O00479 AC008565.1-201ENST00000509046 885 ntBASIC2.11□□□□□ -2.07
HMGN4O00479 OR5H4P-201ENST00000510851 923 ntBASIC2.11□□□□□ -2.07
HMGN4O00479 TTC39CP1-201ENST00000512513 755 ntBASIC2.11□□□□□ -2.07
HMGN4O00479 HIGD1AP3-201ENST00000515857 278 ntBASIC2.11□□□□□ -2.07
HMGN4O00479 SNORA31.15-201ENST00000516771 132 ntBASIC2.11□□□□□ -2.07
HMGN4O00479 AL163153.1-201ENST00000554223 283 ntBASIC2.11□□□□□ -2.07
HMGN4O00479 RNA5SP108-201ENST00000605921 117 ntBASIC2.11□□□□□ -2.07
HMGN4O00479 AC018754.1-201ENST00000607486 925 ntBASIC2.11□□□□□ -2.07
HMGN4O00479 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
HMGN4O00479 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
HMGN4O00479 AC244517.1-201ENST00000606030 2086 ntBASIC2.1□□□□□ -2.07
HMGN4O00479 Z99496.1-201ENST00000469424 1477 ntBASIC2.1□□□□□ -2.07
HMGN4O00479 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
HMGN4O00479 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.1□□□□□ -2.07
HMGN4O00479 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
HMGN4O00479 ATF1P1-201ENST00000406040 927 ntBASIC2.1□□□□□ -2.07
HMGN4O00479 FNDC3CP-201ENST00000420795 1155 ntBASIC2.1□□□□□ -2.07
HMGN4O00479 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.1□□□□□ -2.07
HMGN4O00479 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.1□□□□□ -2.07
HMGN4O00479 AL590103.1-201ENST00000434488 307 ntBASIC2.1□□□□□ -2.07
HMGN4O00479 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC2.1□□□□□ -2.07
HMGN4O00479 HSPE1P28-201ENST00000443139 211 ntBASIC2.1□□□□□ -2.07
HMGN4O00479 ANKRD30BP3-201ENST00000444850 1070 ntBASIC2.1□□□□□ -2.07
HMGN4O00479 RPL21P103-201ENST00000479921 488 ntBASIC2.1□□□□□ -2.07
HMGN4O00479 AC104435.1-201ENST00000483483 166 ntBASIC2.1□□□□□ -2.07
HMGN4O00479 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.1□□□□□ -2.07
HMGN4O00479 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.1□□□□□ -2.07
HMGN4O00479 AC074050.1-201ENST00000563247 211 ntBASIC2.1□□□□□ -2.07
HMGN4O00479 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.1□□□□□ -2.07
HMGN4O00479 DUXAP3-201ENST00000603616 594 ntBASIC2.1□□□□□ -2.07
HMGN4O00479 AC034236.3-201ENST00000605999 461 ntBASIC2.1□□□□□ -2.07
HMGN4O00479 SNORA35B-201ENST00000607417 129 ntBASIC2.1□□□□□ -2.07
HMGN4O00479 AL359535.1-201ENST00000612100 1087 ntBASIC2.1□□□□□ -2.07
HMGN4O00479 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.1□□□□□ -2.07
HMGN4O00479 AC243829.7-201ENST00000633081 225 ntBASIC2.1□□□□□ -2.07
HMGN4O00479 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.1□□□□□ -2.07
HMGN4O00479 AL512283.1-201ENST00000606756 1384 ntBASIC2.1□□□□□ -2.07
HMGN4O00479 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
HMGN4O00479 MIRLET7G-201ENST00000362280 84 ntBASIC2.09□□□□□ -2.07
HMGN4O00479 AL122016.1-201ENST00000403365 367 ntBASIC2.09□□□□□ -2.07
HMGN4O00479 RPL23AP47-201ENST00000408017 460 ntBASIC2.09□□□□□ -2.07
HMGN4O00479 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.09□□□□□ -2.07
HMGN4O00479 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC2.09□□□□□ -2.07
HMGN4O00479 AC107081.1-201ENST00000414975 361 ntBASIC2.09□□□□□ -2.07
HMGN4O00479 TEX41-204ENST00000423031 491 ntTSL 4 BASIC2.09□□□□□ -2.07
HMGN4O00479 AC129850.1-201ENST00000436203 508 ntBASIC2.09□□□□□ -2.07
HMGN4O00479 HIGD1AP11-201ENST00000438361 280 ntBASIC2.09□□□□□ -2.07
HMGN4O00479 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.09□□□□□ -2.07
HMGN4O00479 NPM1P49-201ENST00000448027 714 ntBASIC2.09□□□□□ -2.07
HMGN4O00479 AC006483.1-201ENST00000487308 313 ntBASIC2.09□□□□□ -2.07
HMGN4O00479 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.09□□□□□ -2.07
HMGN4O00479 TMEM248P1-201ENST00000510579 951 ntBASIC2.09□□□□□ -2.07
HMGN4O00479 AC107222.1-201ENST00000510899 637 ntBASIC2.09□□□□□ -2.07
HMGN4O00479 SNORA31.11-201ENST00000516528 139 ntBASIC2.09□□□□□ -2.07
HMGN4O00479 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC2.09□□□□□ -2.07
HMGN4O00479 MTCYBP20-201ENST00000524239 1129 ntBASIC2.09□□□□□ -2.07
HMGN4O00479 SYF2P1-201ENST00000550658 413 ntBASIC2.09□□□□□ -2.07
HMGN4O00479 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC2.09□□□□□ -2.07
HMGN4O00479 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.09□□□□□ -2.07
HMGN4O00479 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.07
HMGN4O00479 MIR3162-201ENST00000581818 82 ntBASIC2.09□□□□□ -2.07
HMGN4O00479 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.09□□□□□ -2.07
HMGN4O00479 LLPHP1-201ENST00000603571 367 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms