Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC040174.2-201ENST00000602701 465 ntBASIC2.76□□□□□ -1.97
UPK1AO00322 AL627309.6-201ENST00000606857 840 ntBASIC2.76□□□□□ -1.97
UPK1AO00322 AC112503.2-201ENST00000609005 552 ntBASIC2.76□□□□□ -1.97
UPK1AO00322 AL355493.4-201ENST00000618530 292 ntBASIC2.76□□□□□ -1.97
UPK1AO00322 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
UPK1AO00322 MIR8057-201ENST00000620957 69 ntBASIC2.76□□□□□ -1.97
UPK1AO00322 AC068620.4-201ENST00000636730 1182 ntBASIC2.76□□□□□ -1.97
UPK1AO00322 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
UPK1AO00322 ZNF37BP-203ENST00000452306 1352 ntBASIC2.75□□□□□ -1.97
UPK1AO00322 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.75□□□□□ -1.97
UPK1AO00322 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
UPK1AO00322 RPL9P7-201ENST00000330965 580 ntBASIC2.75□□□□□ -1.97
UPK1AO00322 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
UPK1AO00322 SSXP10-201ENST00000402595 565 ntBASIC2.75□□□□□ -1.97
UPK1AO00322 ATF1P1-201ENST00000406040 927 ntBASIC2.75□□□□□ -1.97
UPK1AO00322 TANK-206ENST00000406287 875 ntTSL 5 BASIC2.75□□□□□ -1.97
UPK1AO00322 MTND3P20-201ENST00000407663 186 ntBASIC2.75□□□□□ -1.97
UPK1AO00322 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.75□□□□□ -1.97
UPK1AO00322 AL139281.1-201ENST00000422120 335 ntBASIC2.75□□□□□ -1.97
UPK1AO00322 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC2.75□□□□□ -1.97
UPK1AO00322 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC2.75□□□□□ -1.97
UPK1AO00322 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
UPK1AO00322 YWHAZP7-201ENST00000436906 631 ntBASIC2.75□□□□□ -1.97
UPK1AO00322 FABP5P3-201ENST00000437960 408 ntBASIC2.75□□□□□ -1.97
UPK1AO00322 HMGB1P12-201ENST00000438594 598 ntBASIC2.75□□□□□ -1.97
UPK1AO00322 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.75□□□□□ -1.97
UPK1AO00322 HSPE1P28-201ENST00000443139 211 ntBASIC2.75□□□□□ -1.97
UPK1AO00322 MTND1P33-201ENST00000446251 917 ntBASIC2.75□□□□□ -1.97
UPK1AO00322 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.75□□□□□ -1.97
UPK1AO00322 RPL27AP5-201ENST00000469428 449 ntBASIC2.75□□□□□ -1.97
UPK1AO00322 RPS29P2-201ENST00000479278 136 ntBASIC2.75□□□□□ -1.97
UPK1AO00322 HMGB1P38-201ENST00000490557 577 ntBASIC2.75□□□□□ -1.97
UPK1AO00322 SLC25A15P5-201ENST00000508033 253 ntBASIC2.75□□□□□ -1.97
UPK1AO00322 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.75□□□□□ -1.97
UPK1AO00322 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC2.75□□□□□ -1.97
UPK1AO00322 AC107954.1-201ENST00000565906 727 ntBASIC2.75□□□□□ -1.97
UPK1AO00322 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC2.75□□□□□ -1.97
UPK1AO00322 MTCO3P24-201ENST00000572729 782 ntBASIC2.75□□□□□ -1.97
UPK1AO00322 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.75□□□□□ -1.97
UPK1AO00322 AC006504.3-201ENST00000586818 523 ntBASIC2.75□□□□□ -1.97
UPK1AO00322 OR4H6P-202ENST00000603819 340 ntBASIC2.75□□□□□ -1.97
UPK1AO00322 AC090425.2-201ENST00000608818 501 ntBASIC2.75□□□□□ -1.97
UPK1AO00322 AC006023.2-201ENST00000609916 167 ntBASIC2.75□□□□□ -1.97
UPK1AO00322 AC090115.4-201ENST00000609970 188 ntBASIC2.75□□□□□ -1.97
UPK1AO00322 AC020658.4-201ENST00000613987 684 ntBASIC2.75□□□□□ -1.97
UPK1AO00322 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
UPK1AO00322 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.75□□□□□ -1.97
UPK1AO00322 FRG1HP-204ENST00000617940 757 ntBASIC2.75□□□□□ -1.97
UPK1AO00322 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC2.75□□□□□ -1.97
UPK1AO00322 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.75□□□□□ -1.97
UPK1AO00322 FAM35CP-201ENST00000554755 2470 ntBASIC2.75□□□□□ -1.97
UPK1AO00322 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.74□□□□□ -1.97
UPK1AO00322 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
UPK1AO00322 MIR422A-201ENST00000362286 90 ntBASIC2.74□□□□□ -1.97
UPK1AO00322 RNU6-1181P-201ENST00000384191 106 ntBASIC2.74□□□□□ -1.97
UPK1AO00322 SAR1AP2-201ENST00000392696 594 ntBASIC2.74□□□□□ -1.97
UPK1AO00322 RPL5P18-201ENST00000406671 891 ntBASIC2.74□□□□□ -1.97
UPK1AO00322 RNU2-71P-201ENST00000411395 189 ntBASIC2.74□□□□□ -1.97
UPK1AO00322 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC2.74□□□□□ -1.97
UPK1AO00322 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.74□□□□□ -1.97
UPK1AO00322 RPL21P66-201ENST00000426566 466 ntBASIC2.74□□□□□ -1.97
UPK1AO00322 SAR1AP4-201ENST00000429225 591 ntBASIC2.74□□□□□ -1.97
UPK1AO00322 ANKRD30BP3-201ENST00000444850 1070 ntBASIC2.74□□□□□ -1.97
UPK1AO00322 AL162389.1-201ENST00000449233 177 ntBASIC2.74□□□□□ -1.97
UPK1AO00322 RPL21P8-201ENST00000465083 535 ntBASIC2.74□□□□□ -1.97
UPK1AO00322 VN1R17P-201ENST00000472048 1090 ntBASIC2.74□□□□□ -1.97
UPK1AO00322 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
UPK1AO00322 AC103975.1-201ENST00000482506 483 ntBASIC2.74□□□□□ -1.97
UPK1AO00322 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC2.74□□□□□ -1.97
UPK1AO00322 AC133963.2-201ENST00000513686 578 ntBASIC2.74□□□□□ -1.97
UPK1AO00322 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
UPK1AO00322 AP002404.1-201ENST00000532005 451 ntBASIC2.74□□□□□ -1.97
UPK1AO00322 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.74□□□□□ -1.97
UPK1AO00322 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.74□□□□□ -1.97
UPK1AO00322 MIR3690-201ENST00000580266 75 ntBASIC2.74□□□□□ -1.97
UPK1AO00322 AC015871.2-201ENST00000603605 948 ntBASIC2.74□□□□□ -1.97
UPK1AO00322 AC012467.1-201ENST00000607740 256 ntBASIC2.74□□□□□ -1.97
UPK1AO00322 AL442067.2-201ENST00000614033 363 ntBASIC2.74□□□□□ -1.97
UPK1AO00322 AC010338.1-201ENST00000621823 717 ntBASIC2.74□□□□□ -1.97
UPK1AO00322 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.74□□□□□ -1.97
UPK1AO00322 AL356118.1-201ENST00000635272 1078 ntBASIC2.74□□□□□ -1.97
UPK1AO00322 AC108206.1-201ENST00000570186 4159 ntBASIC2.74□□□□□ -1.97
UPK1AO00322 SAGE4P-201ENST00000442271 3381 ntBASIC2.74□□□□□ -1.97
UPK1AO00322 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.73□□□□□ -1.97
UPK1AO00322 AP001350.1-201ENST00000601906 1524 ntBASIC2.73□□□□□ -1.97
UPK1AO00322 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
UPK1AO00322 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
UPK1AO00322 ZNF33BP1-201ENST00000452497 1834 ntBASIC2.73□□□□□ -1.97
UPK1AO00322 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.73□□□□□ -1.97
UPK1AO00322 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
UPK1AO00322 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
UPK1AO00322 MIR208A-201ENST00000362287 71 ntBASIC2.73□□□□□ -1.97
UPK1AO00322 RNU6-374P-201ENST00000364146 108 ntBASIC2.73□□□□□ -1.97
UPK1AO00322 MT-TC-201ENST00000387405 66 ntBASIC2.73□□□□□ -1.97
UPK1AO00322 RNU6-796P-201ENST00000391086 107 ntBASIC2.73□□□□□ -1.97
UPK1AO00322 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.73□□□□□ -1.97
UPK1AO00322 MORF4L1P7-201ENST00000426038 703 ntBASIC2.73□□□□□ -1.97
UPK1AO00322 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC2.73□□□□□ -1.97
UPK1AO00322 HIGD1AP11-201ENST00000438361 280 ntBASIC2.73□□□□□ -1.97
UPK1AO00322 AC127537.2-201ENST00000439258 465 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms