Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 SNORA48.10-201ENST00000516965 160 ntBASIC3.37□□□□□ -1.87
PDLIM1O00151 AP001207.2-201ENST00000519490 539 ntBASIC3.37□□□□□ -1.87
PDLIM1O00151 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.37□□□□□ -1.87
PDLIM1O00151 OR7E13P-201ENST00000526052 910 ntBASIC3.37□□□□□ -1.87
PDLIM1O00151 ZNF705CP-201ENST00000530515 889 ntBASIC3.37□□□□□ -1.87
PDLIM1O00151 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PDLIM1O00151 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.37□□□□□ -1.87
PDLIM1O00151 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.37□□□□□ -1.87
PDLIM1O00151 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.37□□□□□ -1.87
PDLIM1O00151 MIR3912-201ENST00000577566 105 ntBASIC3.37□□□□□ -1.87
PDLIM1O00151 AC107982.3-201ENST00000584957 985 ntBASIC3.37□□□□□ -1.87
PDLIM1O00151 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.37□□□□□ -1.87
PDLIM1O00151 AC091057.3-201ENST00000602684 733 ntBASIC3.37□□□□□ -1.87
PDLIM1O00151 AC006557.5-201ENST00000603126 811 ntBASIC3.37□□□□□ -1.87
PDLIM1O00151 AC069234.5-201ENST00000611056 416 ntBASIC3.37□□□□□ -1.87
PDLIM1O00151 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PDLIM1O00151 AC010975.3-201ENST00000618727 978 ntBASIC3.37□□□□□ -1.87
PDLIM1O00151 AC022960.3-201ENST00000619794 441 ntBASIC3.37□□□□□ -1.87
PDLIM1O00151 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PDLIM1O00151 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.37□□□□□ -1.87
PDLIM1O00151 OR1S1-201ENST00000624470 978 ntBASIC3.37□□□□□ -1.87
PDLIM1O00151 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.37□□□□□ -1.87
PDLIM1O00151 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.37□□□□□ -1.87
PDLIM1O00151 AC026634.1-201ENST00000634369 198 ntBASIC3.37□□□□□ -1.87
PDLIM1O00151 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
PDLIM1O00151 SAGE4P-201ENST00000442271 3381 ntBASIC3.37□□□□□ -1.87
PDLIM1O00151 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PDLIM1O00151 AL359893.1-201ENST00000447628 1580 ntBASIC3.37□□□□□ -1.87
PDLIM1O00151 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PDLIM1O00151 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PDLIM1O00151 AC093831.2-201ENST00000624393 3427 ntBASIC3.37□□□□□ -1.87
PDLIM1O00151 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.36□□□□□ -1.87
PDLIM1O00151 AL161912.2-201ENST00000565707 3007 ntBASIC3.36□□□□□ -1.87
PDLIM1O00151 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PDLIM1O00151 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.36□□□□□ -1.87
PDLIM1O00151 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PDLIM1O00151 ZNF734P-201ENST00000419494 1534 ntBASIC3.36□□□□□ -1.87
PDLIM1O00151 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PDLIM1O00151 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
PDLIM1O00151 RNU4-51P-201ENST00000364206 140 ntBASIC3.36□□□□□ -1.87
PDLIM1O00151 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
PDLIM1O00151 MIR134-201ENST00000385258 73 ntBASIC3.36□□□□□ -1.87
PDLIM1O00151 AC025750.1-201ENST00000399891 379 ntBASIC3.36□□□□□ -1.87
PDLIM1O00151 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.36□□□□□ -1.87
PDLIM1O00151 RN7SKP156-201ENST00000410308 342 ntBASIC3.36□□□□□ -1.87
PDLIM1O00151 CYCSP19-201ENST00000411715 316 ntBASIC3.36□□□□□ -1.87
PDLIM1O00151 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.36□□□□□ -1.87
PDLIM1O00151 AL133384.1-201ENST00000412744 351 ntBASIC3.36□□□□□ -1.87
PDLIM1O00151 AC092634.6-201ENST00000418558 192 ntBASIC3.36□□□□□ -1.87
PDLIM1O00151 KRR1P1-201ENST00000419430 803 ntBASIC3.36□□□□□ -1.87
PDLIM1O00151 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.36□□□□□ -1.87
PDLIM1O00151 AL139281.1-201ENST00000422120 335 ntBASIC3.36□□□□□ -1.87
PDLIM1O00151 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC3.36□□□□□ -1.87
PDLIM1O00151 RPL21P66-201ENST00000426566 466 ntBASIC3.36□□□□□ -1.87
PDLIM1O00151 RPL31P54-201ENST00000429803 370 ntBASIC3.36□□□□□ -1.87
PDLIM1O00151 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.36□□□□□ -1.87
PDLIM1O00151 AC122718.1-201ENST00000439448 744 ntBASIC3.36□□□□□ -1.87
PDLIM1O00151 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.36□□□□□ -1.87
PDLIM1O00151 AC104073.1-201ENST00000451988 151 ntBASIC3.36□□□□□ -1.87
PDLIM1O00151 TRBV26-201ENST00000456572 344 ntBASIC3.36□□□□□ -1.87
PDLIM1O00151 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.36□□□□□ -1.87
PDLIM1O00151 FAM133DP-201ENST00000464802 691 ntBASIC3.36□□□□□ -1.87
PDLIM1O00151 AC022034.3-201ENST00000471393 478 ntBASIC3.36□□□□□ -1.87
PDLIM1O00151 VN1R17P-201ENST00000472048 1090 ntBASIC3.36□□□□□ -1.87
PDLIM1O00151 AL136126.1-201ENST00000473603 402 ntBASIC3.36□□□□□ -1.87
PDLIM1O00151 SYPL1P1-201ENST00000473622 768 ntBASIC3.36□□□□□ -1.87
PDLIM1O00151 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.36□□□□□ -1.87
PDLIM1O00151 AC093853.1-201ENST00000515689 483 ntBASIC3.36□□□□□ -1.87
PDLIM1O00151 MIR2276-201ENST00000516886 89 ntBASIC3.36□□□□□ -1.87
PDLIM1O00151 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.36□□□□□ -1.87
PDLIM1O00151 AC090502.2-201ENST00000549267 280 ntBASIC3.36□□□□□ -1.87
PDLIM1O00151 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC3.36□□□□□ -1.87
PDLIM1O00151 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.36□□□□□ -1.87
PDLIM1O00151 MTND3P13-201ENST00000574391 343 ntBASIC3.36□□□□□ -1.87
PDLIM1O00151 AC005412.1-201ENST00000580812 1049 ntBASIC3.36□□□□□ -1.87
PDLIM1O00151 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.36□□□□□ -1.87
PDLIM1O00151 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.36□□□□□ -1.87
PDLIM1O00151 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.36□□□□□ -1.87
PDLIM1O00151 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.36□□□□□ -1.87
PDLIM1O00151 AC016597.2-201ENST00000613256 341 ntBASIC3.36□□□□□ -1.87
PDLIM1O00151 CYCSP41-201ENST00000616920 296 ntBASIC3.36□□□□□ -1.87
PDLIM1O00151 AC073348.1-201ENST00000623002 331 ntBASIC3.36□□□□□ -1.87
PDLIM1O00151 AC110801.1-201ENST00000623590 212 ntBASIC3.36□□□□□ -1.87
PDLIM1O00151 AC092184.1-201ENST00000625042 715 ntBASIC3.36□□□□□ -1.87
PDLIM1O00151 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.36□□□□□ -1.87
PDLIM1O00151 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PDLIM1O00151 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
PDLIM1O00151 AC092447.7-201ENST00000422212 1621 ntBASIC3.36□□□□□ -1.87
PDLIM1O00151 AP005901.5-201ENST00000545779 1796 ntBASIC3.35□□□□□ -1.87
PDLIM1O00151 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.35□□□□□ -1.87
PDLIM1O00151 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
PDLIM1O00151 snoZ40.1-201ENST00000364540 72 ntBASIC3.35□□□□□ -1.87
PDLIM1O00151 U8.11-201ENST00000384699 133 ntBASIC3.35□□□□□ -1.87
PDLIM1O00151 U8.12-201ENST00000384701 133 ntBASIC3.35□□□□□ -1.87
PDLIM1O00151 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.35□□□□□ -1.87
PDLIM1O00151 RPL23AP47-201ENST00000408017 460 ntBASIC3.35□□□□□ -1.87
PDLIM1O00151 BMS1P22-201ENST00000414726 313 ntBASIC3.35□□□□□ -1.87
PDLIM1O00151 Z75741.2-201ENST00000417272 1167 ntBASIC3.35□□□□□ -1.87
PDLIM1O00151 AC068533.1-201ENST00000418542 415 ntBASIC3.35□□□□□ -1.87
PDLIM1O00151 AL035410.1-201ENST00000427409 427 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 149.4 ms