Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
LINC01549A6NIU2 AC116096.1-201ENST00000566804 2314 ntBASIC1.63□□□□□ -2.15
LINC01549A6NIU2 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
LINC01549A6NIU2 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC1.63□□□□□ -2.15
LINC01549A6NIU2 AC010680.1-201ENST00000590024 3590 ntBASIC1.62□□□□□ -2.15
LINC01549A6NIU2 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
LINC01549A6NIU2 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.62□□□□□ -2.15
LINC01549A6NIU2 ATP5F1P3-201ENST00000397213 657 ntBASIC1.62□□□□□ -2.15
LINC01549A6NIU2 AL356057.3-201ENST00000402607 340 ntBASIC1.62□□□□□ -2.15
LINC01549A6NIU2 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
LINC01549A6NIU2 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC1.62□□□□□ -2.15
LINC01549A6NIU2 MTCO3P30-201ENST00000426425 670 ntBASIC1.62□□□□□ -2.15
LINC01549A6NIU2 AL512649.1-201ENST00000428997 581 ntBASIC1.62□□□□□ -2.15
LINC01549A6NIU2 RPL21P112-201ENST00000434403 463 ntBASIC1.62□□□□□ -2.15
LINC01549A6NIU2 AL590664.1-201ENST00000448065 339 ntBASIC1.62□□□□□ -2.15
LINC01549A6NIU2 AL445669.2-201ENST00000454425 421 ntBASIC1.62□□□□□ -2.15
LINC01549A6NIU2 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.62□□□□□ -2.15
LINC01549A6NIU2 RNU6-717P-201ENST00000459076 104 ntBASIC1.62□□□□□ -2.15
LINC01549A6NIU2 RPS29P12-201ENST00000460178 152 ntBASIC1.62□□□□□ -2.15
LINC01549A6NIU2 AP001992.1-205ENST00000462248 379 ntBASIC1.62□□□□□ -2.15
LINC01549A6NIU2 RPS29P26-201ENST00000477483 171 ntBASIC1.62□□□□□ -2.15
LINC01549A6NIU2 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
LINC01549A6NIU2 NBEAP1-201ENST00000554452 979 ntBASIC1.62□□□□□ -2.15
LINC01549A6NIU2 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC1.62□□□□□ -2.15
LINC01549A6NIU2 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC1.62□□□□□ -2.15
LINC01549A6NIU2 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC1.62□□□□□ -2.15
LINC01549A6NIU2 APOOP1-201ENST00000604695 592 ntBASIC1.62□□□□□ -2.15
LINC01549A6NIU2 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
LINC01549A6NIU2 AC009831.4-201ENST00000620744 325 ntBASIC1.62□□□□□ -2.15
LINC01549A6NIU2 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC1.62□□□□□ -2.15
LINC01549A6NIU2 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC1.62□□□□□ -2.15
LINC01549A6NIU2 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
LINC01549A6NIU2 AL122126.1-201ENST00000546905 1318 ntBASIC1.62□□□□□ -2.15
LINC01549A6NIU2 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
LINC01549A6NIU2 MTCO1P8-201ENST00000416914 1523 ntBASIC1.61□□□□□ -2.15
LINC01549A6NIU2 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
LINC01549A6NIU2 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC1.61□□□□□ -2.15
LINC01549A6NIU2 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
LINC01549A6NIU2 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
LINC01549A6NIU2 SNORA7.2-201ENST00000364446 145 ntBASIC1.61□□□□□ -2.15
LINC01549A6NIU2 RNA5SP515-201ENST00000364570 118 ntBASIC1.61□□□□□ -2.15
LINC01549A6NIU2 RNA5SP138-201ENST00000365098 114 ntBASIC1.61□□□□□ -2.15
LINC01549A6NIU2 SNORA62.3-201ENST00000365110 153 ntBASIC1.61□□□□□ -2.15
LINC01549A6NIU2 MIR92A2-201ENST00000385299 75 ntBASIC1.61□□□□□ -2.15
LINC01549A6NIU2 AL139039.1-201ENST00000401900 692 ntBASIC1.61□□□□□ -2.15
LINC01549A6NIU2 NDUFB4P4-201ENST00000404822 243 ntBASIC1.61□□□□□ -2.15
LINC01549A6NIU2 RN7SKP140-201ENST00000411196 284 ntBASIC1.61□□□□□ -2.15
LINC01549A6NIU2 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC1.61□□□□□ -2.15
LINC01549A6NIU2 AC005005.2-201ENST00000420779 380 ntBASIC1.61□□□□□ -2.15
LINC01549A6NIU2 HMGN2P30-201ENST00000423237 256 ntBASIC1.61□□□□□ -2.15
LINC01549A6NIU2 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC1.61□□□□□ -2.15
LINC01549A6NIU2 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.61□□□□□ -2.15
LINC01549A6NIU2 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC1.61□□□□□ -2.15
LINC01549A6NIU2 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC1.61□□□□□ -2.15
LINC01549A6NIU2 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC1.61□□□□□ -2.15
LINC01549A6NIU2 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC1.61□□□□□ -2.15
LINC01549A6NIU2 AL358832.1-201ENST00000497800 389 ntBASIC1.61□□□□□ -2.15
LINC01549A6NIU2 MTCO1P47-201ENST00000523889 1271 ntBASIC1.61□□□□□ -2.15
LINC01549A6NIU2 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.61□□□□□ -2.15
LINC01549A6NIU2 DNAJC8P1-201ENST00000554535 372 ntBASIC1.61□□□□□ -2.15
LINC01549A6NIU2 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
LINC01549A6NIU2 MIR4448-201ENST00000584360 86 ntBASIC1.61□□□□□ -2.15
LINC01549A6NIU2 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC1.61□□□□□ -2.15
LINC01549A6NIU2 AC020895.1-201ENST00000595362 272 ntBASIC1.61□□□□□ -2.15
LINC01549A6NIU2 AC008739.3-201ENST00000603262 127 ntBASIC1.61□□□□□ -2.15
LINC01549A6NIU2 AL133507.1-201ENST00000605269 557 ntBASIC1.61□□□□□ -2.15
LINC01549A6NIU2 AC112503.1-201ENST00000608436 391 ntBASIC1.61□□□□□ -2.15
LINC01549A6NIU2 AL450472.3-201ENST00000615578 367 ntBASIC1.61□□□□□ -2.15
LINC01549A6NIU2 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC1.61□□□□□ -2.15
LINC01549A6NIU2 AC093591.3-201ENST00000634516 308 ntBASIC1.61□□□□□ -2.15
LINC01549A6NIU2 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
LINC01549A6NIU2 AL645568.2-201ENST00000432815 1337 ntBASIC1.61□□□□□ -2.15
LINC01549A6NIU2 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
LINC01549A6NIU2 AL109809.4-201ENST00000603520 2185 ntBASIC1.6□□□□□ -2.15
LINC01549A6NIU2 AL512646.1-201ENST00000269395 1077 ntBASIC1.6□□□□□ -2.15
LINC01549A6NIU2 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
LINC01549A6NIU2 OR5H2-201ENST00000355273 945 ntBASIC1.6□□□□□ -2.15
LINC01549A6NIU2 SNORA14A-201ENST00000364773 135 ntBASIC1.6□□□□□ -2.15
LINC01549A6NIU2 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC1.6□□□□□ -2.15
LINC01549A6NIU2 SNORA56-201ENST00000383966 129 ntBASIC1.6□□□□□ -2.15
LINC01549A6NIU2 RNU6-1027P-201ENST00000383998 107 ntBASIC1.6□□□□□ -2.15
LINC01549A6NIU2 SNORA18.3-201ENST00000384122 132 ntBASIC1.6□□□□□ -2.15
LINC01549A6NIU2 MIR7-3-201ENST00000384898 110 ntBASIC1.6□□□□□ -2.15
LINC01549A6NIU2 CCNB2P1-201ENST00000399411 1150 ntBASIC1.6□□□□□ -2.15
LINC01549A6NIU2 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC1.6□□□□□ -2.15
LINC01549A6NIU2 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC1.6□□□□□ -2.15
LINC01549A6NIU2 RPL36AP36-201ENST00000418616 301 ntBASIC1.6□□□□□ -2.15
LINC01549A6NIU2 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC1.6□□□□□ -2.15
LINC01549A6NIU2 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC1.6□□□□□ -2.15
LINC01549A6NIU2 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC1.6□□□□□ -2.15
LINC01549A6NIU2 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC1.6□□□□□ -2.15
LINC01549A6NIU2 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC1.6□□□□□ -2.15
LINC01549A6NIU2 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.6□□□□□ -2.15
LINC01549A6NIU2 RPS26P56-201ENST00000444468 240 ntBASIC1.6□□□□□ -2.15
LINC01549A6NIU2 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC1.6□□□□□ -2.15
LINC01549A6NIU2 DCLRE1CP1-201ENST00000454630 470 ntBASIC1.6□□□□□ -2.15
LINC01549A6NIU2 RPS4XP10-201ENST00000465034 731 ntBASIC1.6□□□□□ -2.15
LINC01549A6NIU2 AC108734.3-201ENST00000481241 1165 ntBASIC1.6□□□□□ -2.15
LINC01549A6NIU2 SRI-210ENST00000490437 570 ntTSL 2 BASIC1.6□□□□□ -2.15
LINC01549A6NIU2 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms