Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 RNU5A-8P-201ENST00000364102 114 ntBASIC5.46□□□□□ -1.54
AP4E1Q9UPM8 AC117470.1-201ENST00000381974 330 ntBASIC5.46□□□□□ -1.54
AP4E1Q9UPM8 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
AP4E1Q9UPM8 SNORA67-201ENST00000384423 137 ntBASIC5.46□□□□□ -1.54
AP4E1Q9UPM8 MT-TG-201ENST00000387429 68 ntBASIC5.46□□□□□ -1.54
AP4E1Q9UPM8 CISD1P1-201ENST00000393907 327 ntBASIC5.46□□□□□ -1.54
AP4E1Q9UPM8 AL121834.1-202ENST00000404494 277 ntBASIC5.46□□□□□ -1.54
AP4E1Q9UPM8 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
AP4E1Q9UPM8 RN7SKP206-201ENST00000410823 293 ntBASIC5.46□□□□□ -1.54
AP4E1Q9UPM8 RPL37P10-201ENST00000412884 288 ntBASIC5.46□□□□□ -1.54
AP4E1Q9UPM8 ARL5AP1-201ENST00000418991 388 ntBASIC5.46□□□□□ -1.54
AP4E1Q9UPM8 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.46□□□□□ -1.54
AP4E1Q9UPM8 MED13P1-201ENST00000428342 171 ntBASIC5.46□□□□□ -1.54
AP4E1Q9UPM8 RPL7L1P9-201ENST00000431298 745 ntBASIC5.46□□□□□ -1.54
AP4E1Q9UPM8 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.46□□□□□ -1.54
AP4E1Q9UPM8 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC5.46□□□□□ -1.54
AP4E1Q9UPM8 RNU7-182P-201ENST00000459009 62 ntBASIC5.46□□□□□ -1.54
AP4E1Q9UPM8 AC126389.1-201ENST00000477436 290 ntBASIC5.46□□□□□ -1.54
AP4E1Q9UPM8 RPL21P6-201ENST00000479171 504 ntBASIC5.46□□□□□ -1.54
AP4E1Q9UPM8 AC098591.2-201ENST00000510152 315 ntBASIC5.46□□□□□ -1.54
AP4E1Q9UPM8 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC5.46□□□□□ -1.54
AP4E1Q9UPM8 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC5.46□□□□□ -1.54
AP4E1Q9UPM8 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC5.46□□□□□ -1.54
AP4E1Q9UPM8 RN7SKP295-201ENST00000517264 153 ntBASIC5.46□□□□□ -1.54
AP4E1Q9UPM8 AC109635.4-202ENST00000531666 412 ntBASIC5.46□□□□□ -1.54
AP4E1Q9UPM8 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC5.46□□□□□ -1.54
AP4E1Q9UPM8 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC5.46□□□□□ -1.54
AP4E1Q9UPM8 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.46□□□□□ -1.54
AP4E1Q9UPM8 FKBP1AP1-201ENST00000594588 318 ntBASIC5.46□□□□□ -1.54
AP4E1Q9UPM8 AC069307.1-201ENST00000602820 447 ntBASIC5.46□□□□□ -1.54
AP4E1Q9UPM8 AC008814.1-201ENST00000603797 406 ntBASIC5.46□□□□□ -1.54
AP4E1Q9UPM8 AL592436.1-201ENST00000605135 558 ntBASIC5.46□□□□□ -1.54
AP4E1Q9UPM8 AL022394.1-201ENST00000606979 292 ntBASIC5.46□□□□□ -1.54
AP4E1Q9UPM8 AC010424.2-201ENST00000607594 443 ntBASIC5.46□□□□□ -1.54
AP4E1Q9UPM8 AC092807.2-201ENST00000609367 243 ntBASIC5.46□□□□□ -1.54
AP4E1Q9UPM8 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.46□□□□□ -1.54
AP4E1Q9UPM8 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC5.46□□□□□ -1.54
AP4E1Q9UPM8 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.46□□□□□ -1.54
AP4E1Q9UPM8 MIR4302-201ENST00000638058 60 ntBASIC5.46□□□□□ -1.54
AP4E1Q9UPM8 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
AP4E1Q9UPM8 AL034549.2-201ENST00000618285 3373 ntBASIC5.46□□□□□ -1.54
AP4E1Q9UPM8 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
AP4E1Q9UPM8 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.46□□□□□ -1.54
AP4E1Q9UPM8 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
AP4E1Q9UPM8 AC009902.3-201ENST00000606235 2172 ntBASIC5.46□□□□□ -1.54
AP4E1Q9UPM8 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.46□□□□□ -1.54
AP4E1Q9UPM8 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.46□□□□□ -1.54
AP4E1Q9UPM8 AC093849.1-201ENST00000563631 2209 ntBASIC5.46□□□□□ -1.54
AP4E1Q9UPM8 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.45□□□□□ -1.54
AP4E1Q9UPM8 TAB3P1-202ENST00000452645 1634 ntBASIC5.45□□□□□ -1.54
AP4E1Q9UPM8 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
AP4E1Q9UPM8 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
AP4E1Q9UPM8 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC5.45□□□□□ -1.54
AP4E1Q9UPM8 ELL2P4-201ENST00000446870 1376 ntBASIC5.45□□□□□ -1.54
AP4E1Q9UPM8 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
AP4E1Q9UPM8 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.45□□□□□ -1.54
AP4E1Q9UPM8 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
AP4E1Q9UPM8 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.45□□□□□ -1.54
AP4E1Q9UPM8 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
AP4E1Q9UPM8 RNA5SP187-201ENST00000384400 119 ntBASIC5.45□□□□□ -1.54
AP4E1Q9UPM8 RNU6-985P-201ENST00000410182 104 ntBASIC5.45□□□□□ -1.54
AP4E1Q9UPM8 AC074085.1-201ENST00000413598 418 ntBASIC5.45□□□□□ -1.54
AP4E1Q9UPM8 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC5.45□□□□□ -1.54
AP4E1Q9UPM8 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.45□□□□□ -1.54
AP4E1Q9UPM8 RPS26P56-201ENST00000444468 240 ntBASIC5.45□□□□□ -1.54
AP4E1Q9UPM8 AL118520.1-201ENST00000450770 291 ntBASIC5.45□□□□□ -1.54
AP4E1Q9UPM8 MTND1P9-201ENST00000453775 944 ntBASIC5.45□□□□□ -1.54
AP4E1Q9UPM8 AC104308.1-201ENST00000454621 333 ntBASIC5.45□□□□□ -1.54
AP4E1Q9UPM8 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC5.45□□□□□ -1.54
AP4E1Q9UPM8 AC011225.1-201ENST00000457751 369 ntBASIC5.45□□□□□ -1.54
AP4E1Q9UPM8 AC108161.1-201ENST00000461060 402 ntBASIC5.45□□□□□ -1.54
AP4E1Q9UPM8 RN7SL189P-201ENST00000468631 289 ntBASIC5.45□□□□□ -1.54
AP4E1Q9UPM8 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
AP4E1Q9UPM8 AC020893.1-201ENST00000502452 580 ntBASIC5.45□□□□□ -1.54
AP4E1Q9UPM8 MTCYBP40-201ENST00000509390 1135 ntBASIC5.45□□□□□ -1.54
AP4E1Q9UPM8 AC016559.2-201ENST00000510759 359 ntBASIC5.45□□□□□ -1.54
AP4E1Q9UPM8 AC006427.1-201ENST00000514359 712 ntBASIC5.45□□□□□ -1.54
AP4E1Q9UPM8 RNU6-273P-201ENST00000516937 96 ntBASIC5.45□□□□□ -1.54
AP4E1Q9UPM8 IGKV2-18-201ENST00000522607 343 ntBASIC5.45□□□□□ -1.54
AP4E1Q9UPM8 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.45□□□□□ -1.54
AP4E1Q9UPM8 AC027026.1-201ENST00000532323 742 ntBASIC5.45□□□□□ -1.54
AP4E1Q9UPM8 AC027369.5-201ENST00000533838 755 ntBASIC5.45□□□□□ -1.54
AP4E1Q9UPM8 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.45□□□□□ -1.54
AP4E1Q9UPM8 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5.45□□□□□ -1.54
AP4E1Q9UPM8 IMMP1LP2-201ENST00000552954 492 ntBASIC5.45□□□□□ -1.54
AP4E1Q9UPM8 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC5.45□□□□□ -1.54
AP4E1Q9UPM8 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.45□□□□□ -1.54
AP4E1Q9UPM8 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC5.45□□□□□ -1.54
AP4E1Q9UPM8 MIR6837-201ENST00000620884 64 ntBASIC5.45□□□□□ -1.54
AP4E1Q9UPM8 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
AP4E1Q9UPM8 XPOTP1-201ENST00000443317 2398 ntBASIC5.45□□□□□ -1.54
AP4E1Q9UPM8 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.45□□□□□ -1.54
AP4E1Q9UPM8 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
AP4E1Q9UPM8 AC130650.2-201ENST00000618736 2403 ntBASIC5.45□□□□□ -1.54
AP4E1Q9UPM8 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.45□□□□□ -1.54
AP4E1Q9UPM8 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.45□□□□□ -1.54
AP4E1Q9UPM8 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
AP4E1Q9UPM8 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
AP4E1Q9UPM8 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms