Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.46□□□□□ -1.38
LHX6Q9UPM6 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
LHX6Q9UPM6 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
LHX6Q9UPM6 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
LHX6Q9UPM6 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
LHX6Q9UPM6 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
LHX6Q9UPM6 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
LHX6Q9UPM6 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.45□□□□□ -1.38
LHX6Q9UPM6 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
LHX6Q9UPM6 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC6.45□□□□□ -1.38
LHX6Q9UPM6 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC6.45□□□□□ -1.38
LHX6Q9UPM6 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
LHX6Q9UPM6 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.45□□□□□ -1.38
LHX6Q9UPM6 SLFN12L-201ENST00000260908 3119 ntAPPRIS P2 TSL 5 BASIC6.45□□□□□ -1.38
LHX6Q9UPM6 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
LHX6Q9UPM6 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
LHX6Q9UPM6 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
LHX6Q9UPM6 RNA5SP140-201ENST00000364524 92 ntBASIC6.45□□□□□ -1.38
LHX6Q9UPM6 Y_RNA.542-201ENST00000384641 111 ntBASIC6.45□□□□□ -1.38
LHX6Q9UPM6 RNU6-1055P-201ENST00000391085 107 ntBASIC6.45□□□□□ -1.38
LHX6Q9UPM6 AC063979.1-201ENST00000415539 377 ntBASIC6.45□□□□□ -1.38
LHX6Q9UPM6 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.45□□□□□ -1.38
LHX6Q9UPM6 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.45□□□□□ -1.38
LHX6Q9UPM6 AC016700.2-201ENST00000446011 156 ntBASIC6.45□□□□□ -1.38
LHX6Q9UPM6 HIGD1AP2-201ENST00000446367 280 ntBASIC6.45□□□□□ -1.38
LHX6Q9UPM6 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC6.45□□□□□ -1.38
LHX6Q9UPM6 GAPDHP25-201ENST00000447061 1001 ntBASIC6.45□□□□□ -1.38
LHX6Q9UPM6 MRPS10P1-201ENST00000448483 130 ntBASIC6.45□□□□□ -1.38
LHX6Q9UPM6 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC6.45□□□□□ -1.38
LHX6Q9UPM6 RN7SL860P-201ENST00000473738 223 ntBASIC6.45□□□□□ -1.38
LHX6Q9UPM6 RPL21P6-201ENST00000479171 504 ntBASIC6.45□□□□□ -1.38
LHX6Q9UPM6 SNORA31.3-201ENST00000516029 96 ntBASIC6.45□□□□□ -1.38
LHX6Q9UPM6 AC103783.1-201ENST00000520506 373 ntBASIC6.45□□□□□ -1.38
LHX6Q9UPM6 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC6.45□□□□□ -1.38
LHX6Q9UPM6 AC007225.2-201ENST00000562529 256 ntBASIC6.45□□□□□ -1.38
LHX6Q9UPM6 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
LHX6Q9UPM6 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC6.45□□□□□ -1.38
LHX6Q9UPM6 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC6.45□□□□□ -1.38
LHX6Q9UPM6 AC005191.1-201ENST00000603950 358 ntBASIC6.45□□□□□ -1.38
LHX6Q9UPM6 AL034351.1-201ENST00000605288 668 ntBASIC6.45□□□□□ -1.38
LHX6Q9UPM6 5S_rRNA.23-201ENST00000612086 102 ntBASIC6.45□□□□□ -1.38
LHX6Q9UPM6 AC004825.2-201ENST00000616634 455 ntBASIC6.45□□□□□ -1.38
LHX6Q9UPM6 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
LHX6Q9UPM6 AC127024.6-201ENST00000621598 424 ntBASIC6.45□□□□□ -1.38
LHX6Q9UPM6 CCL14-204ENST00000622526 472 ntTSL 3 BASIC6.45□□□□□ -1.38
LHX6Q9UPM6 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
LHX6Q9UPM6 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
LHX6Q9UPM6 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
LHX6Q9UPM6 OFD1P17-201ENST00000437639 3018 ntBASIC6.45□□□□□ -1.38
LHX6Q9UPM6 AC027228.2-201ENST00000567141 2154 ntBASIC6.45□□□□□ -1.38
LHX6Q9UPM6 CTNNA1-201ENST00000302763 3756 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
LHX6Q9UPM6 ZNF844-202ENST00000441304 2036 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
LHX6Q9UPM6 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
LHX6Q9UPM6 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
LHX6Q9UPM6 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
LHX6Q9UPM6 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
LHX6Q9UPM6 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
LHX6Q9UPM6 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
LHX6Q9UPM6 AC092821.3-202ENST00000641304 2767 ntBASIC6.45□□□□□ -1.38
LHX6Q9UPM6 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
LHX6Q9UPM6 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
LHX6Q9UPM6 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.45□□□□□ -1.38
LHX6Q9UPM6 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
LHX6Q9UPM6 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
LHX6Q9UPM6 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
LHX6Q9UPM6 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
LHX6Q9UPM6 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.44□□□□□ -1.38
LHX6Q9UPM6 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
LHX6Q9UPM6 MAPK10-323ENST00000641493 3207 ntBASIC6.44□□□□□ -1.38
LHX6Q9UPM6 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
LHX6Q9UPM6 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
LHX6Q9UPM6 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
LHX6Q9UPM6 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC6.44□□□□□ -1.38
LHX6Q9UPM6 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
LHX6Q9UPM6 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
LHX6Q9UPM6 GPR1-AS-201ENST00000623040 3708 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
LHX6Q9UPM6 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
LHX6Q9UPM6 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
LHX6Q9UPM6 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
LHX6Q9UPM6 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
LHX6Q9UPM6 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.44□□□□□ -1.38
LHX6Q9UPM6 SNORA58B-201ENST00000364259 136 ntBASIC6.44□□□□□ -1.38
LHX6Q9UPM6 U8.7-201ENST00000364940 136 ntBASIC6.44□□□□□ -1.38
LHX6Q9UPM6 SNORA22-201ENST00000383907 134 ntBASIC6.44□□□□□ -1.38
LHX6Q9UPM6 RNU6-1144P-201ENST00000384247 104 ntBASIC6.44□□□□□ -1.38
LHX6Q9UPM6 AF186996.5-201ENST00000418098 904 ntBASIC6.44□□□□□ -1.38
LHX6Q9UPM6 AC099677.3-201ENST00000427081 395 ntBASIC6.44□□□□□ -1.38
LHX6Q9UPM6 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC6.44□□□□□ -1.38
LHX6Q9UPM6 Z82188.1-201ENST00000436709 154 ntBASIC6.44□□□□□ -1.38
LHX6Q9UPM6 POLR2KP2-201ENST00000438155 177 ntBASIC6.44□□□□□ -1.38
LHX6Q9UPM6 IFNA11P-201ENST00000446352 526 ntBASIC6.44□□□□□ -1.38
LHX6Q9UPM6 PRDX1P1-201ENST00000449329 596 ntBASIC6.44□□□□□ -1.38
LHX6Q9UPM6 snoU13.7-201ENST00000459220 104 ntBASIC6.44□□□□□ -1.38
LHX6Q9UPM6 AC096922.1-201ENST00000461635 651 ntBASIC6.44□□□□□ -1.38
LHX6Q9UPM6 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC6.44□□□□□ -1.38
LHX6Q9UPM6 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC6.44□□□□□ -1.38
LHX6Q9UPM6 AP003115.1-201ENST00000569849 463 ntBASIC6.44□□□□□ -1.38
LHX6Q9UPM6 BPIFA4P-203ENST00000603168 689 ntBASIC6.44□□□□□ -1.38
LHX6Q9UPM6 AL589743.6-201ENST00000611025 117 ntBASIC6.44□□□□□ -1.38
LHX6Q9UPM6 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms