Protein–RNA interactions for Protein: Q9NY46

SCN3A, Sodium channel protein type 3 subunit alpha, humanhuman

Predictions only

Length 2,000 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3AQ9NY46 DNAJC19P8-201ENST00000452887 259 ntBASIC2.37□□□□□ -2.03
SCN3AQ9NY46 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC2.37□□□□□ -2.03
SCN3AQ9NY46 SNRPGP3-201ENST00000469405 227 ntBASIC2.37□□□□□ -2.03
SCN3AQ9NY46 RPL23AP45-201ENST00000476406 468 ntBASIC2.37□□□□□ -2.03
SCN3AQ9NY46 AC113398.2-201ENST00000507630 558 ntBASIC2.37□□□□□ -2.03
SCN3AQ9NY46 AP003102.1-201ENST00000525638 661 ntBASIC2.37□□□□□ -2.03
SCN3AQ9NY46 AP003122.3-201ENST00000526316 255 ntBASIC2.37□□□□□ -2.03
SCN3AQ9NY46 RPL23AP84-201ENST00000571193 464 ntBASIC2.37□□□□□ -2.03
SCN3AQ9NY46 LLPHP1-201ENST00000603571 367 ntBASIC2.37□□□□□ -2.03
SCN3AQ9NY46 AC026790.2-201ENST00000606282 430 ntBASIC2.37□□□□□ -2.03
SCN3AQ9NY46 MIR6817-201ENST00000615588 66 ntBASIC2.37□□□□□ -2.03
SCN3AQ9NY46 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
SCN3AQ9NY46 AC092447.7-201ENST00000422212 1621 ntBASIC2.37□□□□□ -2.03
SCN3AQ9NY46 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
SCN3AQ9NY46 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
SCN3AQ9NY46 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
SCN3AQ9NY46 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.36□□□□□ -2.03
SCN3AQ9NY46 AL672167.1-206ENST00000356293 943 ntBASIC2.36□□□□□ -2.03
SCN3AQ9NY46 AC080125.1-201ENST00000414888 684 ntBASIC2.36□□□□□ -2.03
SCN3AQ9NY46 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC2.36□□□□□ -2.03
SCN3AQ9NY46 AC073310.1-201ENST00000423226 1033 ntBASIC2.36□□□□□ -2.03
SCN3AQ9NY46 ANKRD30BP3-201ENST00000444850 1070 ntBASIC2.36□□□□□ -2.03
SCN3AQ9NY46 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC2.36□□□□□ -2.03
SCN3AQ9NY46 AC026436.1-201ENST00000510537 270 ntBASIC2.36□□□□□ -2.03
SCN3AQ9NY46 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC2.36□□□□□ -2.03
SCN3AQ9NY46 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC2.36□□□□□ -2.03
SCN3AQ9NY46 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC2.36□□□□□ -2.03
SCN3AQ9NY46 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC2.36□□□□□ -2.03
SCN3AQ9NY46 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.36□□□□□ -2.03
SCN3AQ9NY46 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.36□□□□□ -2.03
SCN3AQ9NY46 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.36□□□□□ -2.03
SCN3AQ9NY46 MTND4LP24-201ENST00000572277 291 ntBASIC2.36□□□□□ -2.03
SCN3AQ9NY46 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC2.36□□□□□ -2.03
SCN3AQ9NY46 AL589935.2-201ENST00000616471 1231 ntBASIC2.36□□□□□ -2.03
SCN3AQ9NY46 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.36□□□□□ -2.03
SCN3AQ9NY46 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.36□□□□□ -2.03
SCN3AQ9NY46 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SCN3AQ9NY46 SEPT7P7-201ENST00000420492 1301 ntBASIC2.36□□□□□ -2.03
SCN3AQ9NY46 MIR27B-201ENST00000385129 97 ntBASIC2.35□□□□□ -2.03
SCN3AQ9NY46 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
SCN3AQ9NY46 FCF1P1-201ENST00000432690 571 ntBASIC2.35□□□□□ -2.03
SCN3AQ9NY46 AC091179.1-201ENST00000461606 579 ntBASIC2.35□□□□□ -2.03
SCN3AQ9NY46 TRAV31-201ENST00000502780 342 ntBASIC2.35□□□□□ -2.03
SCN3AQ9NY46 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC2.35□□□□□ -2.03
SCN3AQ9NY46 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2.35□□□□□ -2.03
SCN3AQ9NY46 OR5H4P-201ENST00000510851 923 ntBASIC2.35□□□□□ -2.03
SCN3AQ9NY46 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.35□□□□□ -2.03
SCN3AQ9NY46 AL512310.1-201ENST00000548639 172 ntBASIC2.35□□□□□ -2.03
SCN3AQ9NY46 OR4U1P-201ENST00000554958 912 ntBASIC2.35□□□□□ -2.03
SCN3AQ9NY46 AC007621.1-201ENST00000604544 437 ntBASIC2.35□□□□□ -2.03
SCN3AQ9NY46 AL590808.1-201ENST00000618696 141 ntBASIC2.35□□□□□ -2.03
SCN3AQ9NY46 AL049780.3-201ENST00000624612 1583 ntBASIC2.35□□□□□ -2.03
SCN3AQ9NY46 AC084035.1-201ENST00000634543 607 ntBASIC2.35□□□□□ -2.03
SCN3AQ9NY46 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SCN3AQ9NY46 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
SCN3AQ9NY46 AC009501.3-201ENST00000605001 1352 ntBASIC2.35□□□□□ -2.03
SCN3AQ9NY46 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.35□□□□□ -2.03
SCN3AQ9NY46 AC240504.1-201ENST00000395709 845 ntBASIC2.35□□□□□ -2.03
SCN3AQ9NY46 RNA5SP498-201ENST00000411342 120 ntBASIC2.35□□□□□ -2.03
SCN3AQ9NY46 VN1R51P-201ENST00000411675 945 ntBASIC2.35□□□□□ -2.03
SCN3AQ9NY46 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.35□□□□□ -2.03
SCN3AQ9NY46 MTCYBP7-201ENST00000419540 1134 ntBASIC2.35□□□□□ -2.03
SCN3AQ9NY46 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC2.35□□□□□ -2.03
SCN3AQ9NY46 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC2.35□□□□□ -2.03
SCN3AQ9NY46 AL160175.1-201ENST00000428124 247 ntBASIC2.35□□□□□ -2.03
SCN3AQ9NY46 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.35□□□□□ -2.03
SCN3AQ9NY46 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC2.35□□□□□ -2.03
SCN3AQ9NY46 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC2.35□□□□□ -2.03
SCN3AQ9NY46 OR6K1P-201ENST00000456766 971 ntBASIC2.35□□□□□ -2.03
SCN3AQ9NY46 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.35□□□□□ -2.03
SCN3AQ9NY46 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC2.35□□□□□ -2.03
SCN3AQ9NY46 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC2.35□□□□□ -2.03
SCN3AQ9NY46 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.35□□□□□ -2.03
SCN3AQ9NY46 AC103881.1-201ENST00000603476 538 ntBASIC2.35□□□□□ -2.03
SCN3AQ9NY46 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC2.35□□□□□ -2.03
SCN3AQ9NY46 Z99129.2-201ENST00000619967 314 ntBASIC2.35□□□□□ -2.03
SCN3AQ9NY46 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.35□□□□□ -2.03
SCN3AQ9NY46 AC007336.1-201ENST00000576365 3828 ntBASIC2.35□□□□□ -2.03
SCN3AQ9NY46 RPL7P59-201ENST00000447700 943 ntBASIC2.34□□□□□ -2.03
SCN3AQ9NY46 AC146507.1-201ENST00000468335 354 ntBASIC2.34□□□□□ -2.03
SCN3AQ9NY46 AC004924.1-201ENST00000480160 781 ntBASIC2.34□□□□□ -2.03
SCN3AQ9NY46 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC2.34□□□□□ -2.03
SCN3AQ9NY46 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
SCN3AQ9NY46 OR7K1P-201ENST00000546439 926 ntBASIC2.34□□□□□ -2.03
SCN3AQ9NY46 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.34□□□□□ -2.03
SCN3AQ9NY46 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC2.34□□□□□ -2.03
SCN3AQ9NY46 PCNAP1-202ENST00000595299 752 ntBASIC2.34□□□□□ -2.03
SCN3AQ9NY46 AC079089.3-201ENST00000603094 673 ntBASIC2.34□□□□□ -2.03
SCN3AQ9NY46 AC015726.3-201ENST00000624501 418 ntBASIC2.34□□□□□ -2.03
SCN3AQ9NY46 CTSLP2-204ENST00000629029 392 ntBASIC2.34□□□□□ -2.03
SCN3AQ9NY46 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
SCN3AQ9NY46 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
SCN3AQ9NY46 FAM35BP-202ENST00000497389 3337 ntBASIC2.34□□□□□ -2.04
SCN3AQ9NY46 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
SCN3AQ9NY46 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
SCN3AQ9NY46 AL360182.1-201ENST00000397433 468 ntBASIC2.34□□□□□ -2.04
SCN3AQ9NY46 MIR887-201ENST00000401258 79 ntBASIC2.34□□□□□ -2.04
SCN3AQ9NY46 HNRNPDP2-201ENST00000406475 478 ntBASIC2.34□□□□□ -2.04
SCN3AQ9NY46 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC2.34□□□□□ -2.04
SCN3AQ9NY46 AP000705.1-201ENST00000454567 350 ntBASIC2.34□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms