Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
RTN4Q9NQC3 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
RTN4Q9NQC3 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
RTN4Q9NQC3 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
RTN4Q9NQC3 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
RTN4Q9NQC3 PPP4R3CP-201ENST00000412172 3131 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
RTN4Q9NQC3 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC7.69□□□□□ -1.18
RTN4Q9NQC3 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC7.69□□□□□ -1.18
RTN4Q9NQC3 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
RTN4Q9NQC3 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC7.69□□□□□ -1.18
RTN4Q9NQC3 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
RTN4Q9NQC3 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
RTN4Q9NQC3 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
RTN4Q9NQC3 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
RTN4Q9NQC3 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC7.69□□□□□ -1.18
RTN4Q9NQC3 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
RTN4Q9NQC3 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
RTN4Q9NQC3 HSP90AA4P-202ENST00000506915 2228 ntBASIC7.69□□□□□ -1.18
RTN4Q9NQC3 SNORD73A-201ENST00000386062 65 ntBASIC7.69□□□□□ -1.18
RTN4Q9NQC3 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC7.69□□□□□ -1.18
RTN4Q9NQC3 RNU2-68P-201ENST00000410878 191 ntBASIC7.69□□□□□ -1.18
RTN4Q9NQC3 RNU2-71P-201ENST00000411395 189 ntBASIC7.69□□□□□ -1.18
RTN4Q9NQC3 AL354868.1-201ENST00000417077 482 ntBASIC7.69□□□□□ -1.18
RTN4Q9NQC3 EIF4A1P7-201ENST00000421800 1220 ntBASIC7.69□□□□□ -1.18
RTN4Q9NQC3 MED15P9-201ENST00000424716 533 ntBASIC7.69□□□□□ -1.18
RTN4Q9NQC3 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC7.69□□□□□ -1.18
RTN4Q9NQC3 MYL8P-204ENST00000431574 518 ntBASIC7.69□□□□□ -1.18
RTN4Q9NQC3 AL357552.2-201ENST00000433876 353 ntTSL 5 BASIC7.69□□□□□ -1.18
RTN4Q9NQC3 Z82210.1-201ENST00000440037 231 ntBASIC7.69□□□□□ -1.18
RTN4Q9NQC3 AC108039.2-201ENST00000440214 359 ntBASIC7.69□□□□□ -1.18
RTN4Q9NQC3 AC005532.2-201ENST00000467154 373 ntBASIC7.69□□□□□ -1.18
RTN4Q9NQC3 S100A11P1-201ENST00000477525 312 ntBASIC7.69□□□□□ -1.18
RTN4Q9NQC3 RN7SL306P-201ENST00000492941 296 ntBASIC7.69□□□□□ -1.18
RTN4Q9NQC3 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC7.69□□□□□ -1.18
RTN4Q9NQC3 RNU6-1046P-201ENST00000516538 107 ntBASIC7.69□□□□□ -1.18
RTN4Q9NQC3 TRIM77BP-201ENST00000524985 1119 ntBASIC7.69□□□□□ -1.18
RTN4Q9NQC3 AP000676.2-201ENST00000529711 301 ntBASIC7.69□□□□□ -1.18
RTN4Q9NQC3 OR7E1P-201ENST00000533891 958 ntBASIC7.69□□□□□ -1.18
RTN4Q9NQC3 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC7.69□□□□□ -1.18
RTN4Q9NQC3 MIR4273-201ENST00000582824 84 ntBASIC7.69□□□□□ -1.18
RTN4Q9NQC3 RN7SL25P-201ENST00000583862 260 ntBASIC7.69□□□□□ -1.18
RTN4Q9NQC3 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC7.69□□□□□ -1.18
RTN4Q9NQC3 AC119403.2-201ENST00000590960 598 ntBASIC7.69□□□□□ -1.18
RTN4Q9NQC3 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC7.69□□□□□ -1.18
RTN4Q9NQC3 AC106900.2-201ENST00000604994 317 ntBASIC7.69□□□□□ -1.18
RTN4Q9NQC3 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC7.69□□□□□ -1.18
RTN4Q9NQC3 KDM5DP1-201ENST00000622542 298 ntBASIC7.69□□□□□ -1.18
RTN4Q9NQC3 AC211433.3-201ENST00000623770 375 ntBASIC7.69□□□□□ -1.18
RTN4Q9NQC3 AC120057.5-201ENST00000623840 154 ntBASIC7.69□□□□□ -1.18
RTN4Q9NQC3 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
RTN4Q9NQC3 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC7.69□□□□□ -1.18
RTN4Q9NQC3 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
RTN4Q9NQC3 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
RTN4Q9NQC3 ADAM24P-201ENST00000398655 2101 ntBASIC7.69□□□□□ -1.18
RTN4Q9NQC3 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
RTN4Q9NQC3 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
RTN4Q9NQC3 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
RTN4Q9NQC3 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
RTN4Q9NQC3 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
RTN4Q9NQC3 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC7.68□□□□□ -1.18
RTN4Q9NQC3 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC7.68□□□□□ -1.18
RTN4Q9NQC3 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
RTN4Q9NQC3 RNU6-50P-201ENST00000362356 103 ntBASIC7.68□□□□□ -1.18
RTN4Q9NQC3 Y_RNA.473-201ENST00000384333 102 ntBASIC7.68□□□□□ -1.18
RTN4Q9NQC3 RNY1P14-201ENST00000384426 108 ntBASIC7.68□□□□□ -1.18
RTN4Q9NQC3 RNU6-331P-201ENST00000384724 107 ntBASIC7.68□□□□□ -1.18
RTN4Q9NQC3 MIR614-201ENST00000385082 90 ntBASIC7.68□□□□□ -1.18
RTN4Q9NQC3 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC7.68□□□□□ -1.18
RTN4Q9NQC3 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC7.68□□□□□ -1.18
RTN4Q9NQC3 AC092066.1-201ENST00000425131 317 ntBASIC7.68□□□□□ -1.18
RTN4Q9NQC3 AC068287.1-201ENST00000430283 295 ntBASIC7.68□□□□□ -1.18
RTN4Q9NQC3 CYCSP44-201ENST00000448560 313 ntBASIC7.68□□□□□ -1.18
RTN4Q9NQC3 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC7.68□□□□□ -1.18
RTN4Q9NQC3 KC877373.1-201ENST00000479066 408 ntBASIC7.68□□□□□ -1.18
RTN4Q9NQC3 AL035690.1-201ENST00000490892 383 ntBASIC7.68□□□□□ -1.18
RTN4Q9NQC3 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC7.68□□□□□ -1.18
RTN4Q9NQC3 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC7.68□□□□□ -1.18
RTN4Q9NQC3 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC7.68□□□□□ -1.18
RTN4Q9NQC3 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC7.68□□□□□ -1.18
RTN4Q9NQC3 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC7.68□□□□□ -1.18
RTN4Q9NQC3 TOMM20P1-201ENST00000534518 427 ntBASIC7.68□□□□□ -1.18
RTN4Q9NQC3 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC7.68□□□□□ -1.18
RTN4Q9NQC3 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC7.68□□□□□ -1.18
RTN4Q9NQC3 ACTG1P15-201ENST00000570019 1063 ntBASIC7.68□□□□□ -1.18
RTN4Q9NQC3 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC7.68□□□□□ -1.18
RTN4Q9NQC3 MRO-208ENST00000588444 866 ntTSL 3 BASIC7.68□□□□□ -1.18
RTN4Q9NQC3 AC005255.1-201ENST00000593748 216 ntBASIC7.68□□□□□ -1.18
RTN4Q9NQC3 AC010632.3-201ENST00000611377 369 ntBASIC7.68□□□□□ -1.18
RTN4Q9NQC3 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC7.68□□□□□ -1.18
RTN4Q9NQC3 AC078909.2-201ENST00000620584 398 ntBASIC7.68□□□□□ -1.18
RTN4Q9NQC3 ALG13-230ENST00000623189 458 ntTSL 3 BASIC7.68□□□□□ -1.18
RTN4Q9NQC3 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
RTN4Q9NQC3 MAPK10-328ENST00000641553 4009 ntBASIC7.68□□□□□ -1.18
RTN4Q9NQC3 EEF1A1P24-201ENST00000451469 1378 ntBASIC7.68□□□□□ -1.18
RTN4Q9NQC3 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC7.68□□□□□ -1.18
RTN4Q9NQC3 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC7.68□□□□□ -1.18
RTN4Q9NQC3 AC022336.2-201ENST00000568966 2538 ntBASIC7.68□□□□□ -1.18
RTN4Q9NQC3 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
RTN4Q9NQC3 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC7.67□□□□□ -1.18
RTN4Q9NQC3 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC7.67□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms