Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
UPF2Q9HAU5 SNORA70E-201ENST00000384492 135 ntBASIC4.07□□□□□ -1.76
UPF2Q9HAU5 FABP12P1-201ENST00000401911 322 ntBASIC4.07□□□□□ -1.76
UPF2Q9HAU5 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.07□□□□□ -1.76
UPF2Q9HAU5 AC009518.2-201ENST00000418056 731 ntBASIC4.07□□□□□ -1.76
UPF2Q9HAU5 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.07□□□□□ -1.76
UPF2Q9HAU5 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC4.07□□□□□ -1.76
UPF2Q9HAU5 MTND5P25-201ENST00000430499 799 ntBASIC4.07□□□□□ -1.76
UPF2Q9HAU5 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4.07□□□□□ -1.76
UPF2Q9HAU5 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.07□□□□□ -1.76
UPF2Q9HAU5 AL008629.1-201ENST00000438615 184 ntBASIC4.07□□□□□ -1.76
UPF2Q9HAU5 OR6K5P-201ENST00000447050 945 ntBASIC4.07□□□□□ -1.76
UPF2Q9HAU5 BX248409.1-201ENST00000455497 255 ntBASIC4.07□□□□□ -1.76
UPF2Q9HAU5 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.07□□□□□ -1.76
UPF2Q9HAU5 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.07□□□□□ -1.76
UPF2Q9HAU5 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.07□□□□□ -1.76
UPF2Q9HAU5 GAPDHP39-201ENST00000481866 979 ntBASIC4.07□□□□□ -1.76
UPF2Q9HAU5 AC068587.1-201ENST00000483613 781 ntBASIC4.07□□□□□ -1.76
UPF2Q9HAU5 RPS27P23-201ENST00000487608 251 ntBASIC4.07□□□□□ -1.76
UPF2Q9HAU5 AC110792.2-201ENST00000510278 224 ntBASIC4.07□□□□□ -1.76
UPF2Q9HAU5 AC008562.1-201ENST00000521763 330 ntBASIC4.07□□□□□ -1.76
UPF2Q9HAU5 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.07□□□□□ -1.76
UPF2Q9HAU5 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.07□□□□□ -1.76
UPF2Q9HAU5 MTND2P26-201ENST00000528255 1029 ntBASIC4.07□□□□□ -1.76
UPF2Q9HAU5 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.07□□□□□ -1.76
UPF2Q9HAU5 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC4.07□□□□□ -1.76
UPF2Q9HAU5 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.07□□□□□ -1.76
UPF2Q9HAU5 AL354943.1-201ENST00000572103 781 ntBASIC4.07□□□□□ -1.76
UPF2Q9HAU5 MIR3912-201ENST00000577566 105 ntBASIC4.07□□□□□ -1.76
UPF2Q9HAU5 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.07□□□□□ -1.76
UPF2Q9HAU5 AP001542.2-201ENST00000593141 364 ntBASIC4.07□□□□□ -1.76
UPF2Q9HAU5 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
UPF2Q9HAU5 AC020914.6-201ENST00000594327 272 ntBASIC4.07□□□□□ -1.76
UPF2Q9HAU5 TUSC7.1-201ENST00000610969 165 ntBASIC4.07□□□□□ -1.76
UPF2Q9HAU5 AL591516.1-201ENST00000611326 274 ntBASIC4.07□□□□□ -1.76
UPF2Q9HAU5 uc_338.1-201ENST00000612113 180 ntBASIC4.07□□□□□ -1.76
UPF2Q9HAU5 AC023158.2-201ENST00000614876 543 ntBASIC4.07□□□□□ -1.76
UPF2Q9HAU5 AC105227.2-201ENST00000615075 605 ntBASIC4.07□□□□□ -1.76
UPF2Q9HAU5 AL356321.1-201ENST00000621360 228 ntBASIC4.07□□□□□ -1.76
UPF2Q9HAU5 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC4.07□□□□□ -1.76
UPF2Q9HAU5 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
UPF2Q9HAU5 AC092326.2-201ENST00000624772 1561 ntBASIC4.06□□□□□ -1.76
UPF2Q9HAU5 CR383658.2-201ENST00000547576 1525 ntBASIC4.06□□□□□ -1.76
UPF2Q9HAU5 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC4.06□□□□□ -1.76
UPF2Q9HAU5 AC104454.1-201ENST00000421341 1401 ntBASIC4.06□□□□□ -1.76
UPF2Q9HAU5 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
UPF2Q9HAU5 NACA3P-201ENST00000359690 648 ntBASIC4.06□□□□□ -1.76
UPF2Q9HAU5 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.06□□□□□ -1.76
UPF2Q9HAU5 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.06□□□□□ -1.76
UPF2Q9HAU5 MIR217-201ENST00000384817 110 ntBASIC4.06□□□□□ -1.76
UPF2Q9HAU5 MIR16-1-201ENST00000385271 89 ntBASIC4.06□□□□□ -1.76
UPF2Q9HAU5 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.06□□□□□ -1.76
UPF2Q9HAU5 RAP1BP1-201ENST00000412709 553 ntBASIC4.06□□□□□ -1.76
UPF2Q9HAU5 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.06□□□□□ -1.76
UPF2Q9HAU5 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC4.06□□□□□ -1.76
UPF2Q9HAU5 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.06□□□□□ -1.76
UPF2Q9HAU5 AC004975.1-201ENST00000428733 208 ntBASIC4.06□□□□□ -1.76
UPF2Q9HAU5 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC4.06□□□□□ -1.76
UPF2Q9HAU5 AC092393.1-201ENST00000439625 742 ntBASIC4.06□□□□□ -1.76
UPF2Q9HAU5 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.06□□□□□ -1.76
UPF2Q9HAU5 RPS7P5-201ENST00000441482 581 ntBASIC4.06□□□□□ -1.76
UPF2Q9HAU5 RPL21P133-201ENST00000443666 476 ntBASIC4.06□□□□□ -1.76
UPF2Q9HAU5 AC007327.1-201ENST00000447461 264 ntBASIC4.06□□□□□ -1.76
UPF2Q9HAU5 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.06□□□□□ -1.76
UPF2Q9HAU5 ST13P14-201ENST00000474095 734 ntBASIC4.06□□□□□ -1.76
UPF2Q9HAU5 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.06□□□□□ -1.76
UPF2Q9HAU5 AC104090.1-201ENST00000506341 1171 ntBASIC4.06□□□□□ -1.76
UPF2Q9HAU5 FCF1P8-201ENST00000510322 597 ntBASIC4.06□□□□□ -1.76
UPF2Q9HAU5 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC4.06□□□□□ -1.76
UPF2Q9HAU5 AC008494.2-201ENST00000514544 370 ntBASIC4.06□□□□□ -1.76
UPF2Q9HAU5 RNU1-143P-201ENST00000516296 146 ntBASIC4.06□□□□□ -1.76
UPF2Q9HAU5 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.06□□□□□ -1.76
UPF2Q9HAU5 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC4.06□□□□□ -1.76
UPF2Q9HAU5 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC4.06□□□□□ -1.76
UPF2Q9HAU5 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC4.06□□□□□ -1.76
UPF2Q9HAU5 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.06□□□□□ -1.76
UPF2Q9HAU5 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC4.06□□□□□ -1.76
UPF2Q9HAU5 HSPE1P5-201ENST00000561489 272 ntBASIC4.06□□□□□ -1.76
UPF2Q9HAU5 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.06□□□□□ -1.76
UPF2Q9HAU5 AP005136.1-201ENST00000579765 429 ntBASIC4.06□□□□□ -1.76
UPF2Q9HAU5 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.06□□□□□ -1.76
UPF2Q9HAU5 AC018638.7-201ENST00000605836 1114 ntBASIC4.06□□□□□ -1.76
UPF2Q9HAU5 AC099676.1-201ENST00000608886 657 ntBASIC4.06□□□□□ -1.76
UPF2Q9HAU5 U1.23-201ENST00000610293 146 ntBASIC4.06□□□□□ -1.76
UPF2Q9HAU5 RNU1-68P-201ENST00000615382 146 ntBASIC4.06□□□□□ -1.76
UPF2Q9HAU5 U1.39-201ENST00000621562 146 ntBASIC4.06□□□□□ -1.76
UPF2Q9HAU5 AL157770.1-201ENST00000623049 439 ntBASIC4.06□□□□□ -1.76
UPF2Q9HAU5 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
UPF2Q9HAU5 MTND5P27-201ENST00000428871 1720 ntBASIC4.06□□□□□ -1.76
UPF2Q9HAU5 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
UPF2Q9HAU5 AC107081.3-201ENST00000612715 2034 ntBASIC4.05□□□□□ -1.76
UPF2Q9HAU5 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.05□□□□□ -1.76
UPF2Q9HAU5 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
UPF2Q9HAU5 ZNF736P9Y-201ENST00000439586 1345 ntBASIC4.05□□□□□ -1.76
UPF2Q9HAU5 FAM133CP-201ENST00000332869 704 ntBASIC4.05□□□□□ -1.76
UPF2Q9HAU5 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
UPF2Q9HAU5 RNA5SP197-201ENST00000363357 119 ntBASIC4.05□□□□□ -1.76
UPF2Q9HAU5 RNA5SP391-201ENST00000363456 119 ntBASIC4.05□□□□□ -1.76
UPF2Q9HAU5 U3.15-201ENST00000365398 212 ntBASIC4.05□□□□□ -1.76
UPF2Q9HAU5 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms