Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC4.58□□□□□ -1.68
SEC61A2Q9H9S3 Z92846.1-201ENST00000456203 268 ntBASIC4.58□□□□□ -1.68
SEC61A2Q9H9S3 AC007547.1-201ENST00000462177 490 ntBASIC4.58□□□□□ -1.68
SEC61A2Q9H9S3 AC009127.1-201ENST00000467090 155 ntBASIC4.58□□□□□ -1.68
SEC61A2Q9H9S3 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC4.58□□□□□ -1.68
SEC61A2Q9H9S3 RNU6-410P-201ENST00000517006 107 ntBASIC4.58□□□□□ -1.68
SEC61A2Q9H9S3 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.58□□□□□ -1.68
SEC61A2Q9H9S3 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.58□□□□□ -1.68
SEC61A2Q9H9S3 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.58□□□□□ -1.68
SEC61A2Q9H9S3 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.58□□□□□ -1.68
SEC61A2Q9H9S3 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.58□□□□□ -1.68
SEC61A2Q9H9S3 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.58□□□□□ -1.68
SEC61A2Q9H9S3 MIR3691-201ENST00000578066 90 ntBASIC4.58□□□□□ -1.68
SEC61A2Q9H9S3 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.58□□□□□ -1.68
SEC61A2Q9H9S3 AC013244.1-201ENST00000604279 193 ntBASIC4.58□□□□□ -1.68
SEC61A2Q9H9S3 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.58□□□□□ -1.68
SEC61A2Q9H9S3 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.58□□□□□ -1.68
SEC61A2Q9H9S3 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC4.58□□□□□ -1.68
SEC61A2Q9H9S3 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.58□□□□□ -1.68
SEC61A2Q9H9S3 MTND4LP32-201ENST00000636111 270 ntBASIC4.58□□□□□ -1.68
SEC61A2Q9H9S3 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SEC61A2Q9H9S3 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
SEC61A2Q9H9S3 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SEC61A2Q9H9S3 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.58□□□□□ -1.68
SEC61A2Q9H9S3 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.58□□□□□ -1.68
SEC61A2Q9H9S3 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.58□□□□□ -1.68
SEC61A2Q9H9S3 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.58□□□□□ -1.68
SEC61A2Q9H9S3 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SEC61A2Q9H9S3 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
SEC61A2Q9H9S3 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.58□□□□□ -1.68
SEC61A2Q9H9S3 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.57□□□□□ -1.68
SEC61A2Q9H9S3 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC4.57□□□□□ -1.68
SEC61A2Q9H9S3 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SEC61A2Q9H9S3 Y_RNA.459-201ENST00000384251 102 ntBASIC4.57□□□□□ -1.68
SEC61A2Q9H9S3 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SEC61A2Q9H9S3 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
SEC61A2Q9H9S3 RPL7P60-201ENST00000397636 735 ntBASIC4.57□□□□□ -1.68
SEC61A2Q9H9S3 RNU6-1304P-201ENST00000411374 106 ntBASIC4.57□□□□□ -1.68
SEC61A2Q9H9S3 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.57□□□□□ -1.68
SEC61A2Q9H9S3 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.57□□□□□ -1.68
SEC61A2Q9H9S3 AC127526.1-201ENST00000417526 366 ntBASIC4.57□□□□□ -1.68
SEC61A2Q9H9S3 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SEC61A2Q9H9S3 AC096632.1-201ENST00000427395 310 ntBASIC4.57□□□□□ -1.68
SEC61A2Q9H9S3 CEACAMP9-201ENST00000442990 513 ntBASIC4.57□□□□□ -1.68
SEC61A2Q9H9S3 AC073415.1-201ENST00000449240 153 ntBASIC4.57□□□□□ -1.68
SEC61A2Q9H9S3 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.57□□□□□ -1.68
SEC61A2Q9H9S3 RN7SL808P-201ENST00000496066 299 ntBASIC4.57□□□□□ -1.68
SEC61A2Q9H9S3 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.57□□□□□ -1.68
SEC61A2Q9H9S3 AC008638.1-201ENST00000506035 866 ntBASIC4.57□□□□□ -1.68
SEC61A2Q9H9S3 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.57□□□□□ -1.68
SEC61A2Q9H9S3 AC021146.1-201ENST00000511202 716 ntBASIC4.57□□□□□ -1.68
SEC61A2Q9H9S3 AC018797.3-201ENST00000513388 1241 ntBASIC4.57□□□□□ -1.68
SEC61A2Q9H9S3 RNU6-347P-201ENST00000516658 105 ntBASIC4.57□□□□□ -1.68
SEC61A2Q9H9S3 RN7SKP256-201ENST00000517201 314 ntBASIC4.57□□□□□ -1.68
SEC61A2Q9H9S3 AC027308.1-201ENST00000517993 110 ntBASIC4.57□□□□□ -1.68
SEC61A2Q9H9S3 SUMO2P20-201ENST00000520803 283 ntBASIC4.57□□□□□ -1.68
SEC61A2Q9H9S3 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC4.57□□□□□ -1.68
SEC61A2Q9H9S3 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.57□□□□□ -1.68
SEC61A2Q9H9S3 AP003072.2-201ENST00000527756 676 ntBASIC4.57□□□□□ -1.68
SEC61A2Q9H9S3 BNIP3P6-201ENST00000549284 499 ntBASIC4.57□□□□□ -1.68
SEC61A2Q9H9S3 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SEC61A2Q9H9S3 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.57□□□□□ -1.68
SEC61A2Q9H9S3 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.57□□□□□ -1.68
SEC61A2Q9H9S3 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.57□□□□□ -1.68
SEC61A2Q9H9S3 AC007151.1-201ENST00000572774 483 ntBASIC4.57□□□□□ -1.68
SEC61A2Q9H9S3 MIR3146-201ENST00000580367 79 ntBASIC4.57□□□□□ -1.68
SEC61A2Q9H9S3 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.57□□□□□ -1.68
SEC61A2Q9H9S3 AC084781.2-201ENST00000615568 161 ntBASIC4.57□□□□□ -1.68
SEC61A2Q9H9S3 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.57□□□□□ -1.68
SEC61A2Q9H9S3 AC018445.2-201ENST00000622987 260 ntBASIC4.57□□□□□ -1.68
SEC61A2Q9H9S3 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.57□□□□□ -1.68
SEC61A2Q9H9S3 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.57□□□□□ -1.68
SEC61A2Q9H9S3 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SEC61A2Q9H9S3 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
SEC61A2Q9H9S3 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.57□□□□□ -1.68
SEC61A2Q9H9S3 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.57□□□□□ -1.68
SEC61A2Q9H9S3 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.57□□□□□ -1.68
SEC61A2Q9H9S3 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SEC61A2Q9H9S3 AC083843.3-201ENST00000623679 2186 ntBASIC4.57□□□□□ -1.68
SEC61A2Q9H9S3 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
SEC61A2Q9H9S3 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 MTND5P33-201ENST00000571250 1450 ntBASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 RBPJP2-201ENST00000618187 1444 ntBASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 AC073343.1-201ENST00000328239 651 ntBASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 U3.3-201ENST00000362986 216 ntBASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 U8.4-201ENST00000363626 134 ntBASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 Y_RNA.202-201ENST00000364083 110 ntBASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 Y_RNA.231-201ENST00000364358 102 ntBASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 SNORD42.2-201ENST00000365570 69 ntBASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
SEC61A2Q9H9S3 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms