Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AL691449.1-201ENST00000426570 421 ntBASIC4.26□□□□□ -1.73
EBF3Q9H4W6 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.26□□□□□ -1.73
EBF3Q9H4W6 RPL7P4-203ENST00000430239 730 ntBASIC4.26□□□□□ -1.73
EBF3Q9H4W6 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC4.26□□□□□ -1.73
EBF3Q9H4W6 UBE2V1P5-201ENST00000440070 405 ntBASIC4.26□□□□□ -1.73
EBF3Q9H4W6 DNAJC19P4-201ENST00000440115 345 ntBASIC4.26□□□□□ -1.73
EBF3Q9H4W6 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC4.26□□□□□ -1.73
EBF3Q9H4W6 MTND2P24-201ENST00000453434 806 ntBASIC4.26□□□□□ -1.73
EBF3Q9H4W6 AMD1P1-201ENST00000457220 922 ntBASIC4.26□□□□□ -1.73
EBF3Q9H4W6 RPL23AP71-201ENST00000470966 469 ntBASIC4.26□□□□□ -1.73
EBF3Q9H4W6 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
EBF3Q9H4W6 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.26□□□□□ -1.73
EBF3Q9H4W6 PRDX4P1-201ENST00000507189 574 ntBASIC4.26□□□□□ -1.73
EBF3Q9H4W6 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.26□□□□□ -1.73
EBF3Q9H4W6 AC114781.4-201ENST00000513707 639 ntBASIC4.26□□□□□ -1.73
EBF3Q9H4W6 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.26□□□□□ -1.73
EBF3Q9H4W6 RNU6-528P-201ENST00000516926 100 ntBASIC4.26□□□□□ -1.73
EBF3Q9H4W6 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
EBF3Q9H4W6 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.26□□□□□ -1.73
EBF3Q9H4W6 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.26□□□□□ -1.73
EBF3Q9H4W6 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.26□□□□□ -1.73
EBF3Q9H4W6 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.26□□□□□ -1.73
EBF3Q9H4W6 AC120057.2-201ENST00000571520 271 ntBASIC4.26□□□□□ -1.73
EBF3Q9H4W6 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.26□□□□□ -1.73
EBF3Q9H4W6 AC006566.1-201ENST00000608943 513 ntBASIC4.26□□□□□ -1.73
EBF3Q9H4W6 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.26□□□□□ -1.73
EBF3Q9H4W6 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC4.26□□□□□ -1.73
EBF3Q9H4W6 uc_338.9-201ENST00000617424 182 ntBASIC4.26□□□□□ -1.73
EBF3Q9H4W6 AC018926.3-201ENST00000618841 406 ntBASIC4.26□□□□□ -1.73
EBF3Q9H4W6 AL356321.1-201ENST00000621360 228 ntBASIC4.26□□□□□ -1.73
EBF3Q9H4W6 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.26□□□□□ -1.73
EBF3Q9H4W6 BMS1P21-201ENST00000634565 365 ntBASIC4.26□□□□□ -1.73
EBF3Q9H4W6 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
EBF3Q9H4W6 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.26□□□□□ -1.73
EBF3Q9H4W6 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.26□□□□□ -1.73
EBF3Q9H4W6 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
EBF3Q9H4W6 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
EBF3Q9H4W6 Z82217.1-201ENST00000625157 8149 ntBASIC4.25□□□□□ -1.73
EBF3Q9H4W6 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
EBF3Q9H4W6 Y_RNA.70-201ENST00000362886 110 ntBASIC4.25□□□□□ -1.73
EBF3Q9H4W6 RNU6-317P-201ENST00000384031 107 ntBASIC4.25□□□□□ -1.73
EBF3Q9H4W6 SNORA51.12-201ENST00000384448 134 ntBASIC4.25□□□□□ -1.73
EBF3Q9H4W6 PTMAP2-201ENST00000397627 327 ntBASIC4.25□□□□□ -1.73
EBF3Q9H4W6 TMSB4XP8-201ENST00000402089 135 ntBASIC4.25□□□□□ -1.73
EBF3Q9H4W6 MIR1179-201ENST00000408703 91 ntBASIC4.25□□□□□ -1.73
EBF3Q9H4W6 PIGPP2-201ENST00000411569 458 ntBASIC4.25□□□□□ -1.73
EBF3Q9H4W6 TMSB4XP6-201ENST00000415187 135 ntBASIC4.25□□□□□ -1.73
EBF3Q9H4W6 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC4.25□□□□□ -1.73
EBF3Q9H4W6 TMSB4XP1-201ENST00000424567 135 ntBASIC4.25□□□□□ -1.73
EBF3Q9H4W6 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.25□□□□□ -1.73
EBF3Q9H4W6 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
EBF3Q9H4W6 AL451062.2-201ENST00000427515 271 ntBASIC4.25□□□□□ -1.73
EBF3Q9H4W6 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.25□□□□□ -1.73
EBF3Q9H4W6 AC007389.2-201ENST00000434630 306 ntBASIC4.25□□□□□ -1.73
EBF3Q9H4W6 MTND1P28-201ENST00000435623 950 ntBASIC4.25□□□□□ -1.73
EBF3Q9H4W6 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
EBF3Q9H4W6 AC006011.1-201ENST00000442758 349 ntBASIC4.25□□□□□ -1.73
EBF3Q9H4W6 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.25□□□□□ -1.73
EBF3Q9H4W6 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC4.25□□□□□ -1.73
EBF3Q9H4W6 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.25□□□□□ -1.73
EBF3Q9H4W6 YWHAQP9-201ENST00000445891 512 ntBASIC4.25□□□□□ -1.73
EBF3Q9H4W6 TPT1P14-201ENST00000448018 505 ntBASIC4.25□□□□□ -1.73
EBF3Q9H4W6 AL034418.1-201ENST00000448675 860 ntBASIC4.25□□□□□ -1.73
EBF3Q9H4W6 COX6CP18-201ENST00000448769 222 ntBASIC4.25□□□□□ -1.73
EBF3Q9H4W6 AC072039.1-201ENST00000477611 581 ntBASIC4.25□□□□□ -1.73
EBF3Q9H4W6 AC110792.1-201ENST00000491826 472 ntBASIC4.25□□□□□ -1.73
EBF3Q9H4W6 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.25□□□□□ -1.73
EBF3Q9H4W6 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
EBF3Q9H4W6 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.25□□□□□ -1.73
EBF3Q9H4W6 RNA5SP135-201ENST00000517019 125 ntBASIC4.25□□□□□ -1.73
EBF3Q9H4W6 IGLVIV-53-201ENST00000520107 367 ntBASIC4.25□□□□□ -1.73
EBF3Q9H4W6 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC4.25□□□□□ -1.73
EBF3Q9H4W6 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.25□□□□□ -1.73
EBF3Q9H4W6 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC4.25□□□□□ -1.73
EBF3Q9H4W6 HSPE1P5-201ENST00000561489 272 ntBASIC4.25□□□□□ -1.73
EBF3Q9H4W6 AC090751.1-201ENST00000566966 267 ntBASIC4.25□□□□□ -1.73
EBF3Q9H4W6 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.25□□□□□ -1.73
EBF3Q9H4W6 MIR5685-201ENST00000579080 79 ntBASIC4.25□□□□□ -1.73
EBF3Q9H4W6 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.25□□□□□ -1.73
EBF3Q9H4W6 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC4.25□□□□□ -1.73
EBF3Q9H4W6 AC068276.1-201ENST00000605793 379 ntBASIC4.25□□□□□ -1.73
EBF3Q9H4W6 MIR432-201ENST00000606207 94 ntBASIC4.25□□□□□ -1.73
EBF3Q9H4W6 AP001330.5-201ENST00000607176 411 ntBASIC4.25□□□□□ -1.73
EBF3Q9H4W6 AC106028.5-201ENST00000610332 395 ntBASIC4.25□□□□□ -1.73
EBF3Q9H4W6 AL589743.7-201ENST00000612637 233 ntBASIC4.25□□□□□ -1.73
EBF3Q9H4W6 AC007014.2-201ENST00000615581 479 ntBASIC4.25□□□□□ -1.73
EBF3Q9H4W6 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.25□□□□□ -1.73
EBF3Q9H4W6 AC019278.1-201ENST00000623516 479 ntBASIC4.25□□□□□ -1.73
EBF3Q9H4W6 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.25□□□□□ -1.73
EBF3Q9H4W6 AL157786.1-207ENST00000627771 695 ntBASIC4.25□□□□□ -1.73
EBF3Q9H4W6 AC099063.3-201ENST00000642066 185 ntBASIC4.25□□□□□ -1.73
EBF3Q9H4W6 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
EBF3Q9H4W6 AL031985.3-201ENST00000565390 2449 ntBASIC4.25□□□□□ -1.73
EBF3Q9H4W6 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
EBF3Q9H4W6 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
EBF3Q9H4W6 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.25□□□□□ -1.73
EBF3Q9H4W6 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
EBF3Q9H4W6 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
EBF3Q9H4W6 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.24□□□□□ -1.73
EBF3Q9H4W6 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms