Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 MTND6P2-201ENST00000512226 524 ntBASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 LRRC34P2-201ENST00000514850 553 ntBASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 RN7SKP276-201ENST00000516242 268 ntBASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 SNORA20.3-201ENST00000516880 132 ntBASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 HMGB1P40-201ENST00000525121 540 ntBASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 HMGN2P6-201ENST00000551091 273 ntBASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 MIR4775-201ENST00000581168 75 ntBASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 BDH2P1-201ENST00000602288 736 ntBASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 AC126915.2-201ENST00000610957 190 ntBASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 AL121612.2-201ENST00000612261 482 ntBASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 AC109583.2-201ENST00000617367 129 ntBASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 AC024614.3-201ENST00000637860 256 ntBASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 AC074101.1-201ENST00000637861 241 ntBASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 ATM-228ENST00000639240 498 ntTSL 5 BASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 ATM-230ENST00000640388 578 ntTSL 5 BASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 AC083899.1-201ENST00000454465 3819 ntBASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 AC009812.4-201ENST00000569134 1805 ntBASIC5.95□□□□□ -1.46
TRAIPQ9BWF2 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 RNA5SP507-201ENST00000363603 121 ntBASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 U8.4-201ENST00000363626 134 ntBASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 SNORA74A-201ENST00000364089 198 ntBASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 RNA5SP167-201ENST00000365461 116 ntBASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 MIR765-201ENST00000390226 114 ntBASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 CD3D-202ENST00000392884 476 ntTSL 2 BASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 AL354719.1-201ENST00000406535 843 ntBASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 AL356776.1-201ENST00000406574 447 ntBASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 RNA5SP487-201ENST00000410186 122 ntBASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 AL161631.1-201ENST00000417933 486 ntBASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 MTCYBP8-201ENST00000422855 651 ntBASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 DUTP6-201ENST00000425573 462 ntBASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 CALM2P2-201ENST00000428512 440 ntBASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 HMGB1P27-201ENST00000431429 603 ntBASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 GAPDHP25-201ENST00000447061 1001 ntBASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 AL645939.1-201ENST00000453429 797 ntBASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 CACYBPP2-201ENST00000453625 678 ntBASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 RN7SL610P-201ENST00000463845 291 ntBASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 AC108860.1-201ENST00000484521 383 ntBASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 SNRPCP2-201ENST00000504370 475 ntBASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 AC108078.2-201ENST00000510750 236 ntBASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 OR5B10P-201ENST00000532869 642 ntBASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 SNRPGP16-201ENST00000533275 226 ntBASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 AL355836.1-201ENST00000555951 870 ntBASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 AC087283.1-201ENST00000604029 1074 ntBASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 MIR6133-201ENST00000617057 108 ntBASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 AC118658.2-201ENST00000618697 459 ntBASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 AC068870.2-201ENST00000620635 389 ntBASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 AP003122.6-201ENST00000623831 495 ntBASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 AC112200.1-201ENST00000625015 234 ntBASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 AC099654.2-201ENST00000433031 1980 ntBASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
TRAIPQ9BWF2 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms