Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 XKRYP4-201ENST00000414395 483 ntBASIC3.08□□□□□ -1.92
CDX2Q99626 AC107081.1-201ENST00000414975 361 ntBASIC3.08□□□□□ -1.92
CDX2Q99626 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC3.08□□□□□ -1.92
CDX2Q99626 RPL23AP82-202ENST00000427528 469 ntBASIC3.08□□□□□ -1.92
CDX2Q99626 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.08□□□□□ -1.92
CDX2Q99626 XKRYP5-201ENST00000449659 483 ntBASIC3.08□□□□□ -1.92
CDX2Q99626 MTCO3P16-201ENST00000454456 754 ntBASIC3.08□□□□□ -1.92
CDX2Q99626 CENPBD1P1-201ENST00000464061 469 ntBASIC3.08□□□□□ -1.92
CDX2Q99626 OR52A4P-202ENST00000481634 799 ntBASIC3.08□□□□□ -1.92
CDX2Q99626 OR9N1P-202ENST00000494289 481 ntBASIC3.08□□□□□ -1.92
CDX2Q99626 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.08□□□□□ -1.92
CDX2Q99626 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.08□□□□□ -1.92
CDX2Q99626 IGKV2-36-201ENST00000519999 223 ntBASIC3.08□□□□□ -1.92
CDX2Q99626 AC004923.2-201ENST00000529649 369 ntBASIC3.08□□□□□ -1.92
CDX2Q99626 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC3.08□□□□□ -1.92
CDX2Q99626 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.08□□□□□ -1.92
CDX2Q99626 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.08□□□□□ -1.92
CDX2Q99626 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.08□□□□□ -1.92
CDX2Q99626 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CDX2Q99626 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.08□□□□□ -1.92
CDX2Q99626 DNAJC19P3-201ENST00000594491 331 ntBASIC3.08□□□□□ -1.92
CDX2Q99626 AC040174.2-201ENST00000602701 465 ntBASIC3.08□□□□□ -1.92
CDX2Q99626 LLPHP1-201ENST00000603571 367 ntBASIC3.08□□□□□ -1.92
CDX2Q99626 AC012467.1-201ENST00000607740 256 ntBASIC3.08□□□□□ -1.92
CDX2Q99626 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CDX2Q99626 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.08□□□□□ -1.92
CDX2Q99626 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.08□□□□□ -1.92
CDX2Q99626 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.08□□□□□ -1.92
CDX2Q99626 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CDX2Q99626 RPS4XP5-202ENST00000449995 1334 ntBASIC3.08□□□□□ -1.92
CDX2Q99626 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CDX2Q99626 MTND4P21-201ENST00000453886 1357 ntBASIC3.08□□□□□ -1.92
CDX2Q99626 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.08□□□□□ -1.92
CDX2Q99626 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.08□□□□□ -1.92
CDX2Q99626 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
CDX2Q99626 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CDX2Q99626 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
CDX2Q99626 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CDX2Q99626 AC073325.2-201ENST00000339545 159 ntBASIC3.07□□□□□ -1.92
CDX2Q99626 MIR9-1-201ENST00000385198 89 ntBASIC3.07□□□□□ -1.92
CDX2Q99626 HSPE1P26-201ENST00000405341 275 ntBASIC3.07□□□□□ -1.92
CDX2Q99626 AL450338.1-201ENST00000407987 512 ntBASIC3.07□□□□□ -1.92
CDX2Q99626 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.07□□□□□ -1.92
CDX2Q99626 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.07□□□□□ -1.92
CDX2Q99626 SKP1P1-201ENST00000438081 489 ntBASIC3.07□□□□□ -1.92
CDX2Q99626 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.07□□□□□ -1.92
CDX2Q99626 HMGN2P21-201ENST00000447764 270 ntBASIC3.07□□□□□ -1.92
CDX2Q99626 RN7SL330P-201ENST00000469709 307 ntBASIC3.07□□□□□ -1.92
CDX2Q99626 RPL21P103-201ENST00000479921 488 ntBASIC3.07□□□□□ -1.92
CDX2Q99626 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.07□□□□□ -1.92
CDX2Q99626 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.07□□□□□ -1.92
CDX2Q99626 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.07□□□□□ -1.92
CDX2Q99626 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CDX2Q99626 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.07□□□□□ -1.92
CDX2Q99626 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.07□□□□□ -1.92
CDX2Q99626 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.07□□□□□ -1.92
CDX2Q99626 AC006254.3-201ENST00000603353 884 ntBASIC3.07□□□□□ -1.92
CDX2Q99626 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.07□□□□□ -1.92
CDX2Q99626 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.07□□□□□ -1.92
CDX2Q99626 MTND4P31-201ENST00000425607 1343 ntBASIC3.07□□□□□ -1.92
CDX2Q99626 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.07□□□□□ -1.92
CDX2Q99626 AL592494.2-201ENST00000425455 1548 ntBASIC3.07□□□□□ -1.92
CDX2Q99626 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CDX2Q99626 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CDX2Q99626 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CDX2Q99626 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CDX2Q99626 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CDX2Q99626 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CDX2Q99626 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.06□□□□□ -1.92
CDX2Q99626 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CDX2Q99626 HMGB1P10-201ENST00000395823 563 ntBASIC3.06□□□□□ -1.92
CDX2Q99626 AL590290.1-201ENST00000405336 380 ntBASIC3.06□□□□□ -1.92
CDX2Q99626 RNU2-17P-201ENST00000410290 190 ntBASIC3.06□□□□□ -1.92
CDX2Q99626 AL049737.1-201ENST00000413920 1403 ntBASIC3.06□□□□□ -1.92
CDX2Q99626 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.06□□□□□ -1.92
CDX2Q99626 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.06□□□□□ -1.92
CDX2Q99626 RPS26P40-201ENST00000435209 294 ntBASIC3.06□□□□□ -1.92
CDX2Q99626 RPL7P29-201ENST00000437151 728 ntBASIC3.06□□□□□ -1.92
CDX2Q99626 AL513043.1-201ENST00000439124 535 ntBASIC3.06□□□□□ -1.92
CDX2Q99626 MTCO3P43-201ENST00000440974 771 ntBASIC3.06□□□□□ -1.92
CDX2Q99626 AC009263.1-201ENST00000441193 1239 ntBASIC3.06□□□□□ -1.92
CDX2Q99626 AC007000.2-201ENST00000442564 487 ntBASIC3.06□□□□□ -1.92
CDX2Q99626 ARL5AP2-201ENST00000444698 533 ntBASIC3.06□□□□□ -1.92
CDX2Q99626 Z99127.3-201ENST00000448158 395 ntBASIC3.06□□□□□ -1.92
CDX2Q99626 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.06□□□□□ -1.92
CDX2Q99626 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.06□□□□□ -1.92
CDX2Q99626 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.06□□□□□ -1.92
CDX2Q99626 AC021146.1-201ENST00000511202 716 ntBASIC3.06□□□□□ -1.92
CDX2Q99626 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CDX2Q99626 RN7SKP82-201ENST00000516786 223 ntBASIC3.06□□□□□ -1.92
CDX2Q99626 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.06□□□□□ -1.92
CDX2Q99626 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CDX2Q99626 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.06□□□□□ -1.92
CDX2Q99626 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.06□□□□□ -1.92
CDX2Q99626 AC138915.3-201ENST00000562908 1389 ntBASIC3.06□□□□□ -1.92
CDX2Q99626 MIR4648-201ENST00000580107 72 ntBASIC3.06□□□□□ -1.92
CDX2Q99626 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC3.06□□□□□ -1.92
CDX2Q99626 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.06□□□□□ -1.92
CDX2Q99626 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.06□□□□□ -1.92
CDX2Q99626 AC079610.2-201ENST00000604818 690 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms