Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.37□□□□□ -1.87
RPRD1AQ96P16 AC109635.4-202ENST00000531666 412 ntBASIC3.37□□□□□ -1.87
RPRD1AQ96P16 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.37□□□□□ -1.87
RPRD1AQ96P16 AC074051.3-201ENST00000570238 358 ntBASIC3.37□□□□□ -1.87
RPRD1AQ96P16 ZNF415P1-201ENST00000582279 1166 ntBASIC3.37□□□□□ -1.87
RPRD1AQ96P16 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.37□□□□□ -1.87
RPRD1AQ96P16 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.37□□□□□ -1.87
RPRD1AQ96P16 AL590282.1-201ENST00000610379 1136 ntBASIC3.37□□□□□ -1.87
RPRD1AQ96P16 AL390240.1-201ENST00000612950 384 ntBASIC3.37□□□□□ -1.87
RPRD1AQ96P16 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RPRD1AQ96P16 MIR7112-201ENST00000616126 65 ntBASIC3.37□□□□□ -1.87
RPRD1AQ96P16 AL356094.1-201ENST00000624663 1212 ntBASIC3.37□□□□□ -1.87
RPRD1AQ96P16 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
RPRD1AQ96P16 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.37□□□□□ -1.87
RPRD1AQ96P16 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
RPRD1AQ96P16 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
RPRD1AQ96P16 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
RPRD1AQ96P16 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.36□□□□□ -1.87
RPRD1AQ96P16 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
RPRD1AQ96P16 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RPRD1AQ96P16 AC004925.1-201ENST00000624256 2706 ntBASIC3.36□□□□□ -1.87
RPRD1AQ96P16 AC093908.1-201ENST00000623125 8092 ntBASIC3.36□□□□□ -1.87
RPRD1AQ96P16 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
RPRD1AQ96P16 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
RPRD1AQ96P16 RNU6-989P-201ENST00000362756 107 ntBASIC3.36□□□□□ -1.87
RPRD1AQ96P16 Y_RNA.333-201ENST00000365274 102 ntBASIC3.36□□□□□ -1.87
RPRD1AQ96P16 RNA5SP293-201ENST00000410527 113 ntBASIC3.36□□□□□ -1.87
RPRD1AQ96P16 MTCO2P1-201ENST00000424648 477 ntBASIC3.36□□□□□ -1.87
RPRD1AQ96P16 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RPRD1AQ96P16 UBE2D3P3-201ENST00000426992 425 ntBASIC3.36□□□□□ -1.87
RPRD1AQ96P16 MTATP6P11-201ENST00000428071 670 ntBASIC3.36□□□□□ -1.87
RPRD1AQ96P16 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.36□□□□□ -1.87
RPRD1AQ96P16 B3GNT2P1-201ENST00000434960 952 ntBASIC3.36□□□□□ -1.87
RPRD1AQ96P16 CST9LP2-201ENST00000437612 320 ntBASIC3.36□□□□□ -1.87
RPRD1AQ96P16 AC006028.1-201ENST00000438379 402 ntBASIC3.36□□□□□ -1.87
RPRD1AQ96P16 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.36□□□□□ -1.87
RPRD1AQ96P16 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.36□□□□□ -1.87
RPRD1AQ96P16 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.36□□□□□ -1.87
RPRD1AQ96P16 OR51B8P-201ENST00000449892 769 ntBASIC3.36□□□□□ -1.87
RPRD1AQ96P16 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.36□□□□□ -1.87
RPRD1AQ96P16 AL136126.1-201ENST00000473603 402 ntBASIC3.36□□□□□ -1.87
RPRD1AQ96P16 AC021205.2-201ENST00000480069 347 ntBASIC3.36□□□□□ -1.87
RPRD1AQ96P16 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.36□□□□□ -1.87
RPRD1AQ96P16 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.36□□□□□ -1.87
RPRD1AQ96P16 AC119751.1-201ENST00000513357 765 ntBASIC3.36□□□□□ -1.87
RPRD1AQ96P16 FABP5P12-201ENST00000515543 389 ntBASIC3.36□□□□□ -1.87
RPRD1AQ96P16 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.36□□□□□ -1.87
RPRD1AQ96P16 AP003385.6-201ENST00000531603 374 ntBASIC3.36□□□□□ -1.87
RPRD1AQ96P16 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.36□□□□□ -1.87
RPRD1AQ96P16 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.36□□□□□ -1.87
RPRD1AQ96P16 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.36□□□□□ -1.87
RPRD1AQ96P16 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.36□□□□□ -1.87
RPRD1AQ96P16 AC005951.1-201ENST00000576706 485 ntBASIC3.36□□□□□ -1.87
RPRD1AQ96P16 MIR5680-201ENST00000577577 84 ntBASIC3.36□□□□□ -1.87
RPRD1AQ96P16 AP002906.1-201ENST00000603405 233 ntBASIC3.36□□□□□ -1.87
RPRD1AQ96P16 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RPRD1AQ96P16 AC090116.1-201ENST00000615679 446 ntBASIC3.36□□□□□ -1.87
RPRD1AQ96P16 AC068722.2-201ENST00000618734 544 ntBASIC3.36□□□□□ -1.87
RPRD1AQ96P16 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.36□□□□□ -1.87
RPRD1AQ96P16 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.36□□□□□ -1.87
RPRD1AQ96P16 AL121594.5-201ENST00000631724 573 ntBASIC3.36□□□□□ -1.87
RPRD1AQ96P16 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.36□□□□□ -1.87
RPRD1AQ96P16 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.36□□□□□ -1.87
RPRD1AQ96P16 AC058791.1-201ENST00000608412 3198 ntBASIC3.36□□□□□ -1.87
RPRD1AQ96P16 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
RPRD1AQ96P16 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
RPRD1AQ96P16 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
RPRD1AQ96P16 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RPRD1AQ96P16 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
RPRD1AQ96P16 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.35□□□□□ -1.87
RPRD1AQ96P16 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RPRD1AQ96P16 SNORA38.1-201ENST00000364172 131 ntBASIC3.35□□□□□ -1.87
RPRD1AQ96P16 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RPRD1AQ96P16 RPL22P22-201ENST00000395439 379 ntBASIC3.35□□□□□ -1.87
RPRD1AQ96P16 DEFB130D-201ENST00000426866 237 ntBASIC3.35□□□□□ -1.87
RPRD1AQ96P16 HIGD1AP11-201ENST00000438361 280 ntBASIC3.35□□□□□ -1.87
RPRD1AQ96P16 MOB1AP2-201ENST00000446060 614 ntBASIC3.35□□□□□ -1.87
RPRD1AQ96P16 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.35□□□□□ -1.87
RPRD1AQ96P16 Z75741.1-201ENST00000446793 314 ntBASIC3.35□□□□□ -1.87
RPRD1AQ96P16 AL050341.1-201ENST00000447743 313 ntBASIC3.35□□□□□ -1.87
RPRD1AQ96P16 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.35□□□□□ -1.87
RPRD1AQ96P16 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RPRD1AQ96P16 AL024509.2-201ENST00000493462 493 ntBASIC3.35□□□□□ -1.87
RPRD1AQ96P16 MTCO2P9-201ENST00000503214 694 ntBASIC3.35□□□□□ -1.87
RPRD1AQ96P16 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.35□□□□□ -1.87
RPRD1AQ96P16 NDUFB9P3-201ENST00000521269 501 ntBASIC3.35□□□□□ -1.87
RPRD1AQ96P16 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.35□□□□□ -1.87
RPRD1AQ96P16 AP000790.1-201ENST00000528891 737 ntBASIC3.35□□□□□ -1.87
RPRD1AQ96P16 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.35□□□□□ -1.87
RPRD1AQ96P16 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.35□□□□□ -1.87
RPRD1AQ96P16 RPL21P12-201ENST00000559810 515 ntBASIC3.35□□□□□ -1.87
RPRD1AQ96P16 AL109653.1-201ENST00000603091 248 ntBASIC3.35□□□□□ -1.87
RPRD1AQ96P16 AL513477.2-201ENST00000607858 568 ntBASIC3.35□□□□□ -1.87
RPRD1AQ96P16 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.34□□□□□ -1.87
RPRD1AQ96P16 AC073346.2-201ENST00000624724 2058 ntBASIC3.34□□□□□ -1.87
RPRD1AQ96P16 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
RPRD1AQ96P16 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.34□□□□□ -1.87
RPRD1AQ96P16 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
RPRD1AQ96P16 RNU6-353P-201ENST00000364266 108 ntBASIC3.34□□□□□ -1.87
RPRD1AQ96P16 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms