Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 RN7SKP57-201ENST00000517248 293 ntBASIC2.91□□□□□ -1.94
CCDC42Q96M95 COX6B1P6-201ENST00000522347 255 ntBASIC2.91□□□□□ -1.94
CCDC42Q96M95 AC022616.2-201ENST00000523185 300 ntBASIC2.91□□□□□ -1.94
CCDC42Q96M95 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC2.91□□□□□ -1.94
CCDC42Q96M95 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC2.91□□□□□ -1.94
CCDC42Q96M95 AL049874.4-201ENST00000557593 255 ntBASIC2.91□□□□□ -1.94
CCDC42Q96M95 AC113368.1-201ENST00000603736 382 ntBASIC2.91□□□□□ -1.94
CCDC42Q96M95 AP000787.2-201ENST00000604432 568 ntBASIC2.91□□□□□ -1.94
CCDC42Q96M95 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.91□□□□□ -1.94
CCDC42Q96M95 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
CCDC42Q96M95 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.91□□□□□ -1.94
CCDC42Q96M95 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC2.9□□□□□ -1.94
CCDC42Q96M95 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.9□□□□□ -1.94
CCDC42Q96M95 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
CCDC42Q96M95 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.9□□□□□ -1.95
CCDC42Q96M95 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
CCDC42Q96M95 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
CCDC42Q96M95 RNU1-109P-201ENST00000383960 147 ntBASIC2.9□□□□□ -1.95
CCDC42Q96M95 MTATP6P31-201ENST00000406985 692 ntBASIC2.9□□□□□ -1.95
CCDC42Q96M95 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC2.9□□□□□ -1.95
CCDC42Q96M95 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.9□□□□□ -1.95
CCDC42Q96M95 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.9□□□□□ -1.95
CCDC42Q96M95 AL512649.1-201ENST00000428997 581 ntBASIC2.9□□□□□ -1.95
CCDC42Q96M95 AC005189.1-201ENST00000431286 310 ntBASIC2.9□□□□□ -1.95
CCDC42Q96M95 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC42Q96M95 AC112220.1-201ENST00000434628 355 ntBASIC2.9□□□□□ -1.95
CCDC42Q96M95 NPM1P13-201ENST00000452663 865 ntBASIC2.9□□□□□ -1.95
CCDC42Q96M95 RPS24P6-201ENST00000452670 400 ntBASIC2.9□□□□□ -1.95
CCDC42Q96M95 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.9□□□□□ -1.95
CCDC42Q96M95 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC42Q96M95 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.9□□□□□ -1.95
CCDC42Q96M95 TBCAP3-201ENST00000512475 312 ntBASIC2.9□□□□□ -1.95
CCDC42Q96M95 OR4V1P-201ENST00000525394 1140 ntBASIC2.9□□□□□ -1.95
CCDC42Q96M95 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC42Q96M95 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC2.9□□□□□ -1.95
CCDC42Q96M95 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.9□□□□□ -1.95
CCDC42Q96M95 AC020923.1-201ENST00000624021 917 ntBASIC2.9□□□□□ -1.95
CCDC42Q96M95 NSRP1P1-201ENST00000444067 1693 ntBASIC2.89□□□□□ -1.95
CCDC42Q96M95 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CCDC42Q96M95 FABP12P1-201ENST00000401911 322 ntBASIC2.89□□□□□ -1.95
CCDC42Q96M95 AGR3-202ENST00000402239 563 ntTSL 2 BASIC2.89□□□□□ -1.95
CCDC42Q96M95 AL139095.1-201ENST00000404326 391 ntBASIC2.89□□□□□ -1.95
CCDC42Q96M95 MIR1250-201ENST00000408098 113 ntBASIC2.89□□□□□ -1.95
CCDC42Q96M95 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC42Q96M95 AC109780.2-201ENST00000413467 845 ntBASIC2.89□□□□□ -1.95
CCDC42Q96M95 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.89□□□□□ -1.95
CCDC42Q96M95 ELOCP3-201ENST00000439303 348 ntBASIC2.89□□□□□ -1.95
CCDC42Q96M95 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC2.89□□□□□ -1.95
CCDC42Q96M95 BX510359.1-201ENST00000456973 237 ntBASIC2.89□□□□□ -1.95
CCDC42Q96M95 snoU13.24-201ENST00000458998 104 ntBASIC2.89□□□□□ -1.95
CCDC42Q96M95 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.89□□□□□ -1.95
CCDC42Q96M95 SYPL1P1-201ENST00000473622 768 ntBASIC2.89□□□□□ -1.95
CCDC42Q96M95 AC107398.1-201ENST00000486904 505 ntBASIC2.89□□□□□ -1.95
CCDC42Q96M95 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.89□□□□□ -1.95
CCDC42Q96M95 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.89□□□□□ -1.95
CCDC42Q96M95 AC008494.2-201ENST00000514544 370 ntBASIC2.89□□□□□ -1.95
CCDC42Q96M95 RNA5SP468-201ENST00000516782 93 ntBASIC2.89□□□□□ -1.95
CCDC42Q96M95 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.89□□□□□ -1.95
CCDC42Q96M95 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC2.89□□□□□ -1.95
CCDC42Q96M95 AC004923.2-201ENST00000529649 369 ntBASIC2.89□□□□□ -1.95
CCDC42Q96M95 AC004486.1-201ENST00000546846 233 ntBASIC2.89□□□□□ -1.95
CCDC42Q96M95 AL121603.1-201ENST00000553815 142 ntBASIC2.89□□□□□ -1.95
CCDC42Q96M95 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.89□□□□□ -1.95
CCDC42Q96M95 ATP5A1P2-202ENST00000616464 443 ntBASIC2.89□□□□□ -1.95
CCDC42Q96M95 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
CCDC42Q96M95 Z82195.2-201ENST00000612348 18351 ntBASIC2.89□□□□□ -1.95
CCDC42Q96M95 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CCDC42Q96M95 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
CCDC42Q96M95 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.89□□□□□ -1.95
CCDC42Q96M95 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
CCDC42Q96M95 MTND5P1-201ENST00000445440 1375 ntBASIC2.88□□□□□ -1.95
CCDC42Q96M95 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.88□□□□□ -1.95
CCDC42Q96M95 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC42Q96M95 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.88□□□□□ -1.95
CCDC42Q96M95 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC42Q96M95 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CCDC42Q96M95 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC42Q96M95 EEF1A1P41-201ENST00000414667 207 ntBASIC2.88□□□□□ -1.95
CCDC42Q96M95 ATG3P1-201ENST00000419507 911 ntBASIC2.88□□□□□ -1.95
CCDC42Q96M95 USP9YP36-201ENST00000424581 829 ntBASIC2.88□□□□□ -1.95
CCDC42Q96M95 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC2.88□□□□□ -1.95
CCDC42Q96M95 RPS7P2-201ENST00000435134 607 ntBASIC2.88□□□□□ -1.95
CCDC42Q96M95 TRAPPC13P1-201ENST00000435991 1062 ntBASIC2.88□□□□□ -1.95
CCDC42Q96M95 AP000705.1-201ENST00000454567 350 ntBASIC2.88□□□□□ -1.95
CCDC42Q96M95 RPL23AP31-201ENST00000456160 467 ntBASIC2.88□□□□□ -1.95
CCDC42Q96M95 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC42Q96M95 RPS29P26-201ENST00000477483 171 ntBASIC2.88□□□□□ -1.95
CCDC42Q96M95 AC090525.1-201ENST00000479116 478 ntBASIC2.88□□□□□ -1.95
CCDC42Q96M95 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC42Q96M95 SRIP1-201ENST00000489235 288 ntBASIC2.88□□□□□ -1.95
CCDC42Q96M95 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC42Q96M95 AC111193.1-201ENST00000504097 155 ntBASIC2.88□□□□□ -1.95
CCDC42Q96M95 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
CCDC42Q96M95 MTND5P4-201ENST00000514978 288 ntBASIC2.88□□□□□ -1.95
CCDC42Q96M95 RNU6-711P-201ENST00000517255 106 ntBASIC2.88□□□□□ -1.95
CCDC42Q96M95 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.88□□□□□ -1.95
CCDC42Q96M95 OR7K1P-201ENST00000546439 926 ntBASIC2.88□□□□□ -1.95
CCDC42Q96M95 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.88□□□□□ -1.95
CCDC42Q96M95 AADACP1-206ENST00000561502 1193 ntBASIC2.88□□□□□ -1.95
CCDC42Q96M95 AC090751.1-201ENST00000566966 267 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms