Protein–RNA interactions for Protein: Q96M89

CCDC138, Coiled-coil domain-containing protein 138, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC138Q96M89 AL133243.1-201ENST00000614487 366 ntBASIC4.41□□□□□ -1.7
CCDC138Q96M89 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.41□□□□□ -1.7
CCDC138Q96M89 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC138Q96M89 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC138Q96M89 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.41□□□□□ -1.7
CCDC138Q96M89 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.41□□□□□ -1.7
CCDC138Q96M89 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.41□□□□□ -1.7
CCDC138Q96M89 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CCDC138Q96M89 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.4□□□□□ -1.7
CCDC138Q96M89 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
CCDC138Q96M89 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CCDC138Q96M89 AC009902.3-201ENST00000606235 2172 ntBASIC4.4□□□□□ -1.7
CCDC138Q96M89 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CCDC138Q96M89 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CCDC138Q96M89 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.4□□□□□ -1.7
CCDC138Q96M89 FRG1BP-201ENST00000278882 761 ntBASIC4.4□□□□□ -1.71
CCDC138Q96M89 OR4K15-201ENST00000305051 1216 ntBASIC4.4□□□□□ -1.71
CCDC138Q96M89 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.4□□□□□ -1.71
CCDC138Q96M89 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
CCDC138Q96M89 SNORD74.4-201ENST00000364129 80 ntBASIC4.4□□□□□ -1.71
CCDC138Q96M89 RNU4-91P-201ENST00000364778 135 ntBASIC4.4□□□□□ -1.71
CCDC138Q96M89 RNA5SP189-201ENST00000364920 115 ntBASIC4.4□□□□□ -1.71
CCDC138Q96M89 RNU5E-5P-201ENST00000365379 116 ntBASIC4.4□□□□□ -1.71
CCDC138Q96M89 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CCDC138Q96M89 SNORA56-201ENST00000383966 129 ntBASIC4.4□□□□□ -1.71
CCDC138Q96M89 RNU6-1074P-201ENST00000383995 104 ntBASIC4.4□□□□□ -1.71
CCDC138Q96M89 RNU6-809P-201ENST00000384461 107 ntBASIC4.4□□□□□ -1.71
CCDC138Q96M89 CCDC58P2-201ENST00000417131 366 ntBASIC4.4□□□□□ -1.71
CCDC138Q96M89 UBTFL3-201ENST00000418934 1024 ntBASIC4.4□□□□□ -1.71
CCDC138Q96M89 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC4.4□□□□□ -1.71
CCDC138Q96M89 MTCO2P16-201ENST00000436962 677 ntBASIC4.4□□□□□ -1.71
CCDC138Q96M89 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC4.4□□□□□ -1.71
CCDC138Q96M89 RPL23AP93-201ENST00000440847 484 ntBASIC4.4□□□□□ -1.71
CCDC138Q96M89 AL121871.1-201ENST00000443413 436 ntBASIC4.4□□□□□ -1.71
CCDC138Q96M89 AC239367.2-201ENST00000447309 705 ntBASIC4.4□□□□□ -1.71
CCDC138Q96M89 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.4□□□□□ -1.71
CCDC138Q96M89 UBDP1-202ENST00000457888 382 ntBASIC4.4□□□□□ -1.71
CCDC138Q96M89 RN7SL459P-201ENST00000481078 302 ntBASIC4.4□□□□□ -1.71
CCDC138Q96M89 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC138Q96M89 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC138Q96M89 RNU6-1003P-201ENST00000517099 105 ntBASIC4.4□□□□□ -1.71
CCDC138Q96M89 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC138Q96M89 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC138Q96M89 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.4□□□□□ -1.71
CCDC138Q96M89 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.4□□□□□ -1.71
CCDC138Q96M89 AP001981.2-201ENST00000603241 418 ntBASIC4.4□□□□□ -1.71
CCDC138Q96M89 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CCDC138Q96M89 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC138Q96M89 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.4□□□□□ -1.71
CCDC138Q96M89 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.4□□□□□ -1.71
CCDC138Q96M89 AC139769.1-204ENST00000472297 1931 ntBASIC4.4□□□□□ -1.71
CCDC138Q96M89 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC138Q96M89 MTCO1P9-201ENST00000505577 1534 ntBASIC4.4□□□□□ -1.71
CCDC138Q96M89 AP001350.1-201ENST00000601906 1524 ntBASIC4.4□□□□□ -1.71
CCDC138Q96M89 AC092125.1-201ENST00000562568 1995 ntBASIC4.4□□□□□ -1.71
CCDC138Q96M89 NXPH1-205ENST00000602349 1953 ntBASIC4.4□□□□□ -1.71
CCDC138Q96M89 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CCDC138Q96M89 AC011460.1-201ENST00000636268 1834 ntBASIC4.39□□□□□ -1.71
CCDC138Q96M89 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.39□□□□□ -1.71
CCDC138Q96M89 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC138Q96M89 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.39□□□□□ -1.71
CCDC138Q96M89 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC138Q96M89 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC138Q96M89 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC138Q96M89 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
CCDC138Q96M89 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC138Q96M89 XIAPP3-201ENST00000312918 795 ntBASIC4.39□□□□□ -1.71
CCDC138Q96M89 RNA5SP151-201ENST00000365632 117 ntBASIC4.39□□□□□ -1.71
CCDC138Q96M89 RNU6-114P-201ENST00000384704 105 ntBASIC4.39□□□□□ -1.71
CCDC138Q96M89 RNY3P10-201ENST00000384764 102 ntBASIC4.39□□□□□ -1.71
CCDC138Q96M89 RPS16P5-201ENST00000406501 404 ntBASIC4.39□□□□□ -1.71
CCDC138Q96M89 RN7SKP235-201ENST00000410662 305 ntBASIC4.39□□□□□ -1.71
CCDC138Q96M89 RN7SKP182-201ENST00000410772 298 ntBASIC4.39□□□□□ -1.71
CCDC138Q96M89 CENPIP1-201ENST00000425713 902 ntBASIC4.39□□□□□ -1.71
CCDC138Q96M89 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC138Q96M89 THAP5P1-201ENST00000439089 262 ntBASIC4.39□□□□□ -1.71
CCDC138Q96M89 RPL21P133-201ENST00000443666 476 ntBASIC4.39□□□□□ -1.71
CCDC138Q96M89 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC138Q96M89 H2AFZP6-201ENST00000444403 394 ntBASIC4.39□□□□□ -1.71
CCDC138Q96M89 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC138Q96M89 AC234775.1-201ENST00000454247 670 ntBASIC4.39□□□□□ -1.71
CCDC138Q96M89 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC138Q96M89 RNA5SP269-201ENST00000459032 137 ntBASIC4.39□□□□□ -1.71
CCDC138Q96M89 MTND4LP3-201ENST00000468320 276 ntBASIC4.39□□□□□ -1.71
CCDC138Q96M89 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC138Q96M89 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC138Q96M89 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.39□□□□□ -1.71
CCDC138Q96M89 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC138Q96M89 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC138Q96M89 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.39□□□□□ -1.71
CCDC138Q96M89 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC138Q96M89 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.39□□□□□ -1.71
CCDC138Q96M89 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CCDC138Q96M89 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.39□□□□□ -1.71
CCDC138Q96M89 IGHV3-32-201ENST00000519182 355 ntBASIC4.39□□□□□ -1.71
CCDC138Q96M89 AP000827.1-201ENST00000527814 258 ntBASIC4.39□□□□□ -1.71
CCDC138Q96M89 AP001781.1-201ENST00000530977 207 ntBASIC4.39□□□□□ -1.71
CCDC138Q96M89 AC100770.1-201ENST00000532310 322 ntBASIC4.39□□□□□ -1.71
CCDC138Q96M89 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.39□□□□□ -1.71
CCDC138Q96M89 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms