Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 MTND4P5-201ENST00000435821 1374 ntBASIC4.78□□□□□ -1.64
CDK5RAP3Q96JB5 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.77□□□□□ -1.65
CDK5RAP3Q96JB5 PABPC1P7-201ENST00000413177 1513 ntBASIC4.77□□□□□ -1.65
CDK5RAP3Q96JB5 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.77□□□□□ -1.65
CDK5RAP3Q96JB5 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CDK5RAP3Q96JB5 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CDK5RAP3Q96JB5 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.77□□□□□ -1.65
CDK5RAP3Q96JB5 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.77□□□□□ -1.65
CDK5RAP3Q96JB5 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
CDK5RAP3Q96JB5 RNU1-14P-201ENST00000362759 152 ntBASIC4.77□□□□□ -1.65
CDK5RAP3Q96JB5 SLC9B1P2-201ENST00000398120 1184 ntBASIC4.77□□□□□ -1.65
CDK5RAP3Q96JB5 MIR1250-201ENST00000408098 113 ntBASIC4.77□□□□□ -1.65
CDK5RAP3Q96JB5 AC092832.1-201ENST00000422934 400 ntBASIC4.77□□□□□ -1.65
CDK5RAP3Q96JB5 AC005517.2-201ENST00000424673 553 ntBASIC4.77□□□□□ -1.65
CDK5RAP3Q96JB5 RPL23AP46-201ENST00000438548 490 ntBASIC4.77□□□□□ -1.65
CDK5RAP3Q96JB5 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.77□□□□□ -1.65
CDK5RAP3Q96JB5 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.77□□□□□ -1.65
CDK5RAP3Q96JB5 AL592447.1-201ENST00000447592 540 ntBASIC4.77□□□□□ -1.65
CDK5RAP3Q96JB5 AC087312.1-201ENST00000471411 480 ntBASIC4.77□□□□□ -1.65
CDK5RAP3Q96JB5 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.77□□□□□ -1.65
CDK5RAP3Q96JB5 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.77□□□□□ -1.65
CDK5RAP3Q96JB5 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.77□□□□□ -1.65
CDK5RAP3Q96JB5 Vault.1-201ENST00000516474 102 ntBASIC4.77□□□□□ -1.65
CDK5RAP3Q96JB5 RNA5SP519-201ENST00000516480 119 ntBASIC4.77□□□□□ -1.65
CDK5RAP3Q96JB5 RNA5SP73-201ENST00000516744 108 ntBASIC4.77□□□□□ -1.65
CDK5RAP3Q96JB5 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.77□□□□□ -1.65
CDK5RAP3Q96JB5 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.77□□□□□ -1.65
CDK5RAP3Q96JB5 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.77□□□□□ -1.65
CDK5RAP3Q96JB5 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.77□□□□□ -1.65
CDK5RAP3Q96JB5 OR5AP1P-201ENST00000529730 940 ntBASIC4.77□□□□□ -1.65
CDK5RAP3Q96JB5 AC022880.1-201ENST00000534017 973 ntBASIC4.77□□□□□ -1.65
CDK5RAP3Q96JB5 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.77□□□□□ -1.65
CDK5RAP3Q96JB5 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.77□□□□□ -1.65
CDK5RAP3Q96JB5 OR6C73P-201ENST00000546432 358 ntBASIC4.77□□□□□ -1.65
CDK5RAP3Q96JB5 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.77□□□□□ -1.65
CDK5RAP3Q96JB5 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CDK5RAP3Q96JB5 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CDK5RAP3Q96JB5 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.77□□□□□ -1.65
CDK5RAP3Q96JB5 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.77□□□□□ -1.65
CDK5RAP3Q96JB5 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.77□□□□□ -1.65
CDK5RAP3Q96JB5 CYP4A43P-201ENST00000568156 121 ntBASIC4.77□□□□□ -1.65
CDK5RAP3Q96JB5 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.77□□□□□ -1.65
CDK5RAP3Q96JB5 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.77□□□□□ -1.65
CDK5RAP3Q96JB5 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.77□□□□□ -1.65
CDK5RAP3Q96JB5 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.77□□□□□ -1.65
CDK5RAP3Q96JB5 AC079089.3-201ENST00000603094 673 ntBASIC4.77□□□□□ -1.65
CDK5RAP3Q96JB5 AC025946.2-201ENST00000603398 234 ntBASIC4.77□□□□□ -1.65
CDK5RAP3Q96JB5 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.77□□□□□ -1.65
CDK5RAP3Q96JB5 AL357080.1-201ENST00000617394 239 ntBASIC4.77□□□□□ -1.65
CDK5RAP3Q96JB5 AC026585.1-201ENST00000619582 524 ntBASIC4.77□□□□□ -1.65
CDK5RAP3Q96JB5 AC099842.1-201ENST00000619919 596 ntBASIC4.77□□□□□ -1.65
CDK5RAP3Q96JB5 AC008013.2-202ENST00000637965 364 ntBASIC4.77□□□□□ -1.65
CDK5RAP3Q96JB5 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
CDK5RAP3Q96JB5 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.76□□□□□ -1.65
CDK5RAP3Q96JB5 AC097504.1-201ENST00000515103 2415 ntBASIC4.76□□□□□ -1.65
CDK5RAP3Q96JB5 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
CDK5RAP3Q96JB5 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDK5RAP3Q96JB5 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDK5RAP3Q96JB5 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDK5RAP3Q96JB5 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.76□□□□□ -1.65
CDK5RAP3Q96JB5 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDK5RAP3Q96JB5 RNU1-108P-201ENST00000362556 161 ntBASIC4.76□□□□□ -1.65
CDK5RAP3Q96JB5 RNVU1-3-201ENST00000364313 161 ntBASIC4.76□□□□□ -1.65
CDK5RAP3Q96JB5 RNU6-343P-201ENST00000364709 104 ntBASIC4.76□□□□□ -1.65
CDK5RAP3Q96JB5 RNU5E-5P-201ENST00000365379 116 ntBASIC4.76□□□□□ -1.65
CDK5RAP3Q96JB5 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
CDK5RAP3Q96JB5 SNORA75-201ENST00000384158 137 ntBASIC4.76□□□□□ -1.65
CDK5RAP3Q96JB5 RNU6-1119P-201ENST00000384349 108 ntBASIC4.76□□□□□ -1.65
CDK5RAP3Q96JB5 MIR1305-201ENST00000408300 86 ntBASIC4.76□□□□□ -1.65
CDK5RAP3Q96JB5 RN7SKP235-201ENST00000410662 305 ntBASIC4.76□□□□□ -1.65
CDK5RAP3Q96JB5 AC007899.1-201ENST00000412776 775 ntBASIC4.76□□□□□ -1.65
CDK5RAP3Q96JB5 MTCO2P5-201ENST00000422621 426 ntBASIC4.76□□□□□ -1.65
CDK5RAP3Q96JB5 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.76□□□□□ -1.65
CDK5RAP3Q96JB5 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.76□□□□□ -1.65
CDK5RAP3Q96JB5 MUPP-201ENST00000438111 566 ntBASIC4.76□□□□□ -1.65
CDK5RAP3Q96JB5 RPS24P1-201ENST00000438550 371 ntBASIC4.76□□□□□ -1.65
CDK5RAP3Q96JB5 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC4.76□□□□□ -1.65
CDK5RAP3Q96JB5 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.76□□□□□ -1.65
CDK5RAP3Q96JB5 ELOCP30-201ENST00000447108 299 ntBASIC4.76□□□□□ -1.65
CDK5RAP3Q96JB5 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.76□□□□□ -1.65
CDK5RAP3Q96JB5 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.76□□□□□ -1.65
CDK5RAP3Q96JB5 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC4.76□□□□□ -1.65
CDK5RAP3Q96JB5 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.76□□□□□ -1.65
CDK5RAP3Q96JB5 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.76□□□□□ -1.65
CDK5RAP3Q96JB5 ARL2BPP4-201ENST00000506854 471 ntBASIC4.76□□□□□ -1.65
CDK5RAP3Q96JB5 AC022447.3-201ENST00000506865 495 ntBASIC4.76□□□□□ -1.65
CDK5RAP3Q96JB5 PARP4P3-201ENST00000510265 317 ntBASIC4.76□□□□□ -1.65
CDK5RAP3Q96JB5 KCTD9P2-201ENST00000512203 1013 ntBASIC4.76□□□□□ -1.65
CDK5RAP3Q96JB5 RNA5SP49-201ENST00000516450 115 ntBASIC4.76□□□□□ -1.65
CDK5RAP3Q96JB5 MYL12AP1-201ENST00000518490 515 ntBASIC4.76□□□□□ -1.65
CDK5RAP3Q96JB5 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CDK5RAP3Q96JB5 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.76□□□□□ -1.65
CDK5RAP3Q96JB5 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC4.76□□□□□ -1.65
CDK5RAP3Q96JB5 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.76□□□□□ -1.65
CDK5RAP3Q96JB5 AL139174.1-201ENST00000531489 886 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms