Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AC112492.1-201ENST00000449607 712 ntBASIC3.65□□□□□ -1.83
PDLIM5Q96HC4 MTCO3P16-201ENST00000454456 754 ntBASIC3.65□□□□□ -1.83
PDLIM5Q96HC4 AC099563.1-201ENST00000456086 418 ntBASIC3.65□□□□□ -1.83
PDLIM5Q96HC4 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.65□□□□□ -1.83
PDLIM5Q96HC4 RPL7P47-201ENST00000497299 556 ntBASIC3.65□□□□□ -1.83
PDLIM5Q96HC4 AL139099.1-201ENST00000497398 403 ntBASIC3.65□□□□□ -1.83
PDLIM5Q96HC4 AC092593.2-201ENST00000513866 913 ntBASIC3.65□□□□□ -1.83
PDLIM5Q96HC4 RN7SKP13-201ENST00000515933 244 ntBASIC3.65□□□□□ -1.83
PDLIM5Q96HC4 AC087808.1-201ENST00000520501 361 ntBASIC3.65□□□□□ -1.83
PDLIM5Q96HC4 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.65□□□□□ -1.83
PDLIM5Q96HC4 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.65□□□□□ -1.83
PDLIM5Q96HC4 AC023538.1-201ENST00000534576 736 ntBASIC3.65□□□□□ -1.83
PDLIM5Q96HC4 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.65□□□□□ -1.83
PDLIM5Q96HC4 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.65□□□□□ -1.83
PDLIM5Q96HC4 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.65□□□□□ -1.83
PDLIM5Q96HC4 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.65□□□□□ -1.83
PDLIM5Q96HC4 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.65□□□□□ -1.83
PDLIM5Q96HC4 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.65□□□□□ -1.83
PDLIM5Q96HC4 KLKP1-201ENST00000595979 403 ntBASIC3.65□□□□□ -1.83
PDLIM5Q96HC4 ELOCP35-201ENST00000604289 336 ntBASIC3.65□□□□□ -1.83
PDLIM5Q96HC4 AL034351.1-201ENST00000605288 668 ntBASIC3.65□□□□□ -1.83
PDLIM5Q96HC4 AC004908.3-201ENST00000610248 625 ntBASIC3.65□□□□□ -1.83
PDLIM5Q96HC4 MIR6875-201ENST00000617506 72 ntBASIC3.65□□□□□ -1.83
PDLIM5Q96HC4 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PDLIM5Q96HC4 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PDLIM5Q96HC4 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.65□□□□□ -1.83
PDLIM5Q96HC4 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
PDLIM5Q96HC4 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.65□□□□□ -1.83
PDLIM5Q96HC4 AC107982.1-201ENST00000507171 1300 ntBASIC3.65□□□□□ -1.83
PDLIM5Q96HC4 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 AC138915.3-201ENST00000562908 1389 ntBASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 AP005901.5-201ENST00000545779 1796 ntBASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 AC002546.1-201ENST00000588041 2504 ntBASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 Y_RNA.625-201ENST00000411256 107 ntBASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 RPS24P7-201ENST00000416921 246 ntBASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 Z75741.2-201ENST00000417272 1167 ntBASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 AC127526.1-201ENST00000417526 366 ntBASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 MTCO2P21-201ENST00000419780 677 ntBASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 GLRXP1-201ENST00000423261 334 ntBASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 AC084290.1-201ENST00000434995 374 ntBASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 HMGB1P25-201ENST00000468402 607 ntBASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 OR4G11P-201ENST00000492842 939 ntBASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 KLHL2P1-201ENST00000508691 521 ntBASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 HIGD1AP5-201ENST00000529959 259 ntBASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 MTCO2P15-201ENST00000532655 656 ntBASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 TRAV15-201ENST00000556680 249 ntBASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 MTND4P33-201ENST00000556706 766 ntBASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 AC099489.2-201ENST00000574976 260 ntBASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 MTND3P19-201ENST00000603825 345 ntBASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 AC092653.1-201ENST00000608509 531 ntBASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 AL391261.4-201ENST00000616012 481 ntBASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 AC021755.4-201ENST00000616620 456 ntBASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 AL158163.2-201ENST00000619110 700 ntBASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 AP000484.1-201ENST00000620067 1252 ntBASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 AC090897.3-201ENST00000636973 1157 ntBASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 LINC02211-204ENST00000642024 1070 ntBASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 AL732372.2-225ENST00000642124 456 ntBASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PDLIM5Q96HC4 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
PDLIM5Q96HC4 AC091152.2-201ENST00000591628 2569 ntBASIC3.63□□□□□ -1.83
PDLIM5Q96HC4 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PDLIM5Q96HC4 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PDLIM5Q96HC4 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
PDLIM5Q96HC4 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.63□□□□□ -1.83
PDLIM5Q96HC4 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.63□□□□□ -1.83
PDLIM5Q96HC4 AP004289.2-201ENST00000444413 1457 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 143 ms