Protein–RNA interactions for Protein: Q8WXE1

ATRIP, ATR-interacting protein, humanhuman

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIPQ8WXE1 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
ATRIPQ8WXE1 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.71□□□□□ -1.66
ATRIPQ8WXE1 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.71□□□□□ -1.66
ATRIPQ8WXE1 SNRPEP3-201ENST00000338402 276 ntBASIC4.71□□□□□ -1.66
ATRIPQ8WXE1 SNORD74.4-201ENST00000364129 80 ntBASIC4.71□□□□□ -1.66
ATRIPQ8WXE1 RN7SKP280-201ENST00000364196 304 ntBASIC4.71□□□□□ -1.66
ATRIPQ8WXE1 RNU6-657P-201ENST00000383904 107 ntBASIC4.71□□□□□ -1.66
ATRIPQ8WXE1 SNORA11F-201ENST00000408237 128 ntBASIC4.71□□□□□ -1.66
ATRIPQ8WXE1 RNU2-66P-201ENST00000410650 161 ntBASIC4.71□□□□□ -1.66
ATRIPQ8WXE1 FCF1P9-201ENST00000412546 282 ntBASIC4.71□□□□□ -1.66
ATRIPQ8WXE1 RPS7P13-201ENST00000413955 498 ntBASIC4.71□□□□□ -1.66
ATRIPQ8WXE1 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.71□□□□□ -1.66
ATRIPQ8WXE1 MTCYBP5-201ENST00000423752 1135 ntBASIC4.71□□□□□ -1.66
ATRIPQ8WXE1 SLC44A3-AS1-205ENST00000424505 612 ntBASIC4.71□□□□□ -1.66
ATRIPQ8WXE1 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.71□□□□□ -1.66
ATRIPQ8WXE1 MTND1P28-201ENST00000435623 950 ntBASIC4.71□□□□□ -1.66
ATRIPQ8WXE1 MTATP6P13-201ENST00000438531 667 ntBASIC4.71□□□□□ -1.66
ATRIPQ8WXE1 RPL23AP89-201ENST00000439324 255 ntBASIC4.71□□□□□ -1.66
ATRIPQ8WXE1 AL353748.1-201ENST00000440753 474 ntBASIC4.71□□□□□ -1.66
ATRIPQ8WXE1 VN1R34P-201ENST00000447387 883 ntBASIC4.71□□□□□ -1.66
ATRIPQ8WXE1 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.71□□□□□ -1.66
ATRIPQ8WXE1 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC4.71□□□□□ -1.66
ATRIPQ8WXE1 RPS27AP17-201ENST00000463344 455 ntBASIC4.71□□□□□ -1.66
ATRIPQ8WXE1 AC087385.1-201ENST00000475062 312 ntBASIC4.71□□□□□ -1.66
ATRIPQ8WXE1 AC013828.1-201ENST00000481845 158 ntBASIC4.71□□□□□ -1.66
ATRIPQ8WXE1 OR4G11P-201ENST00000492842 939 ntBASIC4.71□□□□□ -1.66
ATRIPQ8WXE1 AC096751.1-202ENST00000502691 1067 ntBASIC4.71□□□□□ -1.66
ATRIPQ8WXE1 AC025445.1-201ENST00000502728 300 ntBASIC4.71□□□□□ -1.66
ATRIPQ8WXE1 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
ATRIPQ8WXE1 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.71□□□□□ -1.66
ATRIPQ8WXE1 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.71□□□□□ -1.66
ATRIPQ8WXE1 PARP4P3-201ENST00000510265 317 ntBASIC4.71□□□□□ -1.66
ATRIPQ8WXE1 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.71□□□□□ -1.66
ATRIPQ8WXE1 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.71□□□□□ -1.66
ATRIPQ8WXE1 MTND4LP26-201ENST00000518144 282 ntBASIC4.71□□□□□ -1.66
ATRIPQ8WXE1 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.71□□□□□ -1.66
ATRIPQ8WXE1 AC016957.1-201ENST00000534895 309 ntBASIC4.71□□□□□ -1.66
ATRIPQ8WXE1 AC025884.1-201ENST00000556034 378 ntBASIC4.71□□□□□ -1.66
ATRIPQ8WXE1 EIF5A2P1-201ENST00000564027 460 ntBASIC4.71□□□□□ -1.66
ATRIPQ8WXE1 VN1R79P-201ENST00000593540 513 ntBASIC4.71□□□□□ -1.66
ATRIPQ8WXE1 AC012065.4-201ENST00000602445 679 ntBASIC4.71□□□□□ -1.66
ATRIPQ8WXE1 AC015871.2-201ENST00000603605 948 ntBASIC4.71□□□□□ -1.66
ATRIPQ8WXE1 AC091805.2-201ENST00000603848 235 ntBASIC4.71□□□□□ -1.66
ATRIPQ8WXE1 RBM11P1-201ENST00000604951 799 ntBASIC4.71□□□□□ -1.66
ATRIPQ8WXE1 AC107214.2-201ENST00000608204 634 ntBASIC4.71□□□□□ -1.66
ATRIPQ8WXE1 AC013476.2-201ENST00000614456 459 ntBASIC4.71□□□□□ -1.66
ATRIPQ8WXE1 AC006133.1-201ENST00000617106 264 ntBASIC4.71□□□□□ -1.66
ATRIPQ8WXE1 AC022306.2-201ENST00000617563 647 ntBASIC4.71□□□□□ -1.66
ATRIPQ8WXE1 AC006065.5-201ENST00000623427 349 ntBASIC4.71□□□□□ -1.66
ATRIPQ8WXE1 AL356596.1-201ENST00000624230 379 ntBASIC4.71□□□□□ -1.66
ATRIPQ8WXE1 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC4.71□□□□□ -1.66
ATRIPQ8WXE1 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
ATRIPQ8WXE1 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.66
ATRIPQ8WXE1 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
ATRIPQ8WXE1 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
ATRIPQ8WXE1 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
ATRIPQ8WXE1 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
ATRIPQ8WXE1 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.7□□□□□ -1.66
ATRIPQ8WXE1 MTND4P16-201ENST00000466108 1367 ntBASIC4.7□□□□□ -1.66
ATRIPQ8WXE1 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ATRIPQ8WXE1 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
ATRIPQ8WXE1 FGF7P2-201ENST00000332473 296 ntBASIC4.7□□□□□ -1.66
ATRIPQ8WXE1 RNU6-356P-201ENST00000384140 107 ntBASIC4.7□□□□□ -1.66
ATRIPQ8WXE1 MIR554-201ENST00000384874 96 ntBASIC4.7□□□□□ -1.66
ATRIPQ8WXE1 AC097374.1-203ENST00000400783 485 ntBASIC4.7□□□□□ -1.66
ATRIPQ8WXE1 SNORA11.1-201ENST00000408133 129 ntBASIC4.7□□□□□ -1.66
ATRIPQ8WXE1 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ATRIPQ8WXE1 AC008280.1-201ENST00000418851 412 ntBASIC4.7□□□□□ -1.66
ATRIPQ8WXE1 UBTFL3-201ENST00000418934 1024 ntBASIC4.7□□□□□ -1.66
ATRIPQ8WXE1 RPL7AP25-201ENST00000423357 805 ntBASIC4.7□□□□□ -1.66
ATRIPQ8WXE1 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC4.7□□□□□ -1.66
ATRIPQ8WXE1 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.7□□□□□ -1.66
ATRIPQ8WXE1 MTND1P1-201ENST00000445453 368 ntBASIC4.7□□□□□ -1.66
ATRIPQ8WXE1 HSFY6P-201ENST00000445573 403 ntBASIC4.7□□□□□ -1.66
ATRIPQ8WXE1 RPL26P28-201ENST00000451325 435 ntBASIC4.7□□□□□ -1.66
ATRIPQ8WXE1 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.7□□□□□ -1.66
ATRIPQ8WXE1 TRGVB-201ENST00000453257 471 ntBASIC4.7□□□□□ -1.66
ATRIPQ8WXE1 DNAJC19P1-201ENST00000455312 319 ntBASIC4.7□□□□□ -1.66
ATRIPQ8WXE1 AC146507.1-201ENST00000468335 354 ntBASIC4.7□□□□□ -1.66
ATRIPQ8WXE1 UQCRHP4-201ENST00000471686 272 ntBASIC4.7□□□□□ -1.66
ATRIPQ8WXE1 UBTFL6-201ENST00000477929 1024 ntBASIC4.7□□□□□ -1.66
ATRIPQ8WXE1 RPL9P33-201ENST00000484311 566 ntBASIC4.7□□□□□ -1.66
ATRIPQ8WXE1 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.7□□□□□ -1.66
ATRIPQ8WXE1 MTND2P33-201ENST00000506452 1031 ntBASIC4.7□□□□□ -1.66
ATRIPQ8WXE1 ARL2BPP4-201ENST00000506854 471 ntBASIC4.7□□□□□ -1.66
ATRIPQ8WXE1 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.7□□□□□ -1.66
ATRIPQ8WXE1 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ATRIPQ8WXE1 FTH1P9-201ENST00000513251 355 ntBASIC4.7□□□□□ -1.66
ATRIPQ8WXE1 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ATRIPQ8WXE1 RNU6-583P-201ENST00000516012 92 ntBASIC4.7□□□□□ -1.66
ATRIPQ8WXE1 SNORA67.7-201ENST00000516664 135 ntBASIC4.7□□□□□ -1.66
ATRIPQ8WXE1 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.7□□□□□ -1.66
ATRIPQ8WXE1 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.7□□□□□ -1.66
ATRIPQ8WXE1 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC4.7□□□□□ -1.66
ATRIPQ8WXE1 AP003392.2-201ENST00000527269 208 ntBASIC4.7□□□□□ -1.66
ATRIPQ8WXE1 AC090502.2-201ENST00000549267 280 ntBASIC4.7□□□□□ -1.66
ATRIPQ8WXE1 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.7□□□□□ -1.66
ATRIPQ8WXE1 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.7□□□□□ -1.66
ATRIPQ8WXE1 SERPINE4P-201ENST00000554978 281 ntBASIC4.7□□□□□ -1.66
ATRIPQ8WXE1 CENPUP2-201ENST00000555897 1186 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms