Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CCHCR1Q8TD31 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.72□□□□□ -1.65
CCHCR1Q8TD31 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.72□□□□□ -1.65
CCHCR1Q8TD31 AL139415.2-201ENST00000431968 163 ntBASIC4.72□□□□□ -1.65
CCHCR1Q8TD31 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.72□□□□□ -1.65
CCHCR1Q8TD31 RPS20P21-201ENST00000466859 343 ntBASIC4.72□□□□□ -1.65
CCHCR1Q8TD31 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.72□□□□□ -1.65
CCHCR1Q8TD31 RPL36AP41-201ENST00000493820 306 ntBASIC4.72□□□□□ -1.65
CCHCR1Q8TD31 AC093767.1-201ENST00000504523 156 ntBASIC4.72□□□□□ -1.65
CCHCR1Q8TD31 AC108078.1-201ENST00000508073 725 ntBASIC4.72□□□□□ -1.65
CCHCR1Q8TD31 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.72□□□□□ -1.65
CCHCR1Q8TD31 RNA5SP497-201ENST00000516081 97 ntBASIC4.72□□□□□ -1.65
CCHCR1Q8TD31 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.72□□□□□ -1.65
CCHCR1Q8TD31 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.72□□□□□ -1.65
CCHCR1Q8TD31 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.72□□□□□ -1.65
CCHCR1Q8TD31 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.72□□□□□ -1.65
CCHCR1Q8TD31 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.72□□□□□ -1.65
CCHCR1Q8TD31 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.72□□□□□ -1.65
CCHCR1Q8TD31 AP000860.1-201ENST00000605250 559 ntBASIC4.72□□□□□ -1.65
CCHCR1Q8TD31 AL390208.1-201ENST00000605885 644 ntBASIC4.72□□□□□ -1.65
CCHCR1Q8TD31 AP002360.3-201ENST00000607673 710 ntBASIC4.72□□□□□ -1.65
CCHCR1Q8TD31 CR381653.2-201ENST00000624041 768 ntBASIC4.72□□□□□ -1.65
CCHCR1Q8TD31 AC124864.2-201ENST00000624736 186 ntBASIC4.72□□□□□ -1.65
CCHCR1Q8TD31 PISRT1-201ENST00000626175 531 ntBASIC4.72□□□□□ -1.65
CCHCR1Q8TD31 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.72□□□□□ -1.65
CCHCR1Q8TD31 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.72□□□□□ -1.65
CCHCR1Q8TD31 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CCHCR1Q8TD31 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CCHCR1Q8TD31 SAGE2P-201ENST00000420011 2126 ntBASIC4.72□□□□□ -1.65
CCHCR1Q8TD31 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCHCR1Q8TD31 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.72□□□□□ -1.65
CCHCR1Q8TD31 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
CCHCR1Q8TD31 AC022893.2-201ENST00000564832 3296 ntBASIC4.71□□□□□ -1.65
CCHCR1Q8TD31 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
CCHCR1Q8TD31 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCHCR1Q8TD31 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.71□□□□□ -1.66
CCHCR1Q8TD31 U8.3-201ENST00000363321 132 ntBASIC4.71□□□□□ -1.66
CCHCR1Q8TD31 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CCHCR1Q8TD31 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.71□□□□□ -1.66
CCHCR1Q8TD31 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.71□□□□□ -1.66
CCHCR1Q8TD31 RPL31P2-201ENST00000413849 377 ntBASIC4.71□□□□□ -1.66
CCHCR1Q8TD31 RAC1P3-201ENST00000416129 580 ntBASIC4.71□□□□□ -1.66
CCHCR1Q8TD31 AC140479.3-201ENST00000418944 1126 ntBASIC4.71□□□□□ -1.66
CCHCR1Q8TD31 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.71□□□□□ -1.66
CCHCR1Q8TD31 OR4F13P-201ENST00000428478 931 ntBASIC4.71□□□□□ -1.66
CCHCR1Q8TD31 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.71□□□□□ -1.66
CCHCR1Q8TD31 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.71□□□□□ -1.66
CCHCR1Q8TD31 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.71□□□□□ -1.66
CCHCR1Q8TD31 FAM103A2P-201ENST00000444122 354 ntBASIC4.71□□□□□ -1.66
CCHCR1Q8TD31 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.71□□□□□ -1.66
CCHCR1Q8TD31 PLGLA-201ENST00000465668 449 ntBASIC4.71□□□□□ -1.66
CCHCR1Q8TD31 MTCO3P38-201ENST00000468910 766 ntBASIC4.71□□□□□ -1.66
CCHCR1Q8TD31 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.71□□□□□ -1.66
CCHCR1Q8TD31 AC012170.1-201ENST00000495139 359 ntBASIC4.71□□□□□ -1.66
CCHCR1Q8TD31 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.71□□□□□ -1.66
CCHCR1Q8TD31 AC015795.1-201ENST00000513669 327 ntBASIC4.71□□□□□ -1.66
CCHCR1Q8TD31 AC093677.1-201ENST00000514414 678 ntBASIC4.71□□□□□ -1.66
CCHCR1Q8TD31 IGLV3-26-201ENST00000520756 302 ntBASIC4.71□□□□□ -1.66
CCHCR1Q8TD31 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.71□□□□□ -1.66
CCHCR1Q8TD31 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCHCR1Q8TD31 AC092470.1-201ENST00000546187 132 ntBASIC4.71□□□□□ -1.66
CCHCR1Q8TD31 AL110118.1-201ENST00000553543 400 ntBASIC4.71□□□□□ -1.66
CCHCR1Q8TD31 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.71□□□□□ -1.66
CCHCR1Q8TD31 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC4.71□□□□□ -1.66
CCHCR1Q8TD31 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.71□□□□□ -1.66
CCHCR1Q8TD31 MIR3682-201ENST00000581338 84 ntBASIC4.71□□□□□ -1.66
CCHCR1Q8TD31 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.71□□□□□ -1.66
CCHCR1Q8TD31 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.71□□□□□ -1.66
CCHCR1Q8TD31 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.71□□□□□ -1.66
CCHCR1Q8TD31 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCHCR1Q8TD31 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.71□□□□□ -1.66
CCHCR1Q8TD31 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCHCR1Q8TD31 AL161616.1-201ENST00000611867 286 ntBASIC4.71□□□□□ -1.66
CCHCR1Q8TD31 AL592295.2-201ENST00000612578 206 ntBASIC4.71□□□□□ -1.66
CCHCR1Q8TD31 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCHCR1Q8TD31 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.71□□□□□ -1.66
CCHCR1Q8TD31 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCHCR1Q8TD31 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.71□□□□□ -1.66
CCHCR1Q8TD31 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCHCR1Q8TD31 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.71□□□□□ -1.66
CCHCR1Q8TD31 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCHCR1Q8TD31 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCHCR1Q8TD31 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCHCR1Q8TD31 AC092447.10-201ENST00000620607 1652 ntBASIC4.7□□□□□ -1.66
CCHCR1Q8TD31 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.7□□□□□ -1.66
CCHCR1Q8TD31 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCHCR1Q8TD31 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CCHCR1Q8TD31 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCHCR1Q8TD31 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCHCR1Q8TD31 AC095050.2-201ENST00000510748 1458 ntBASIC4.7□□□□□ -1.66
CCHCR1Q8TD31 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCHCR1Q8TD31 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCHCR1Q8TD31 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.7□□□□□ -1.66
CCHCR1Q8TD31 AL590240.1-201ENST00000334118 313 ntBASIC4.7□□□□□ -1.66
CCHCR1Q8TD31 SNORA71.2-201ENST00000364941 134 ntBASIC4.7□□□□□ -1.66
CCHCR1Q8TD31 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.7□□□□□ -1.66
CCHCR1Q8TD31 RPL31P1-201ENST00000398116 372 ntBASIC4.7□□□□□ -1.66
CCHCR1Q8TD31 RPL7P25-201ENST00000404151 721 ntBASIC4.7□□□□□ -1.66
CCHCR1Q8TD31 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.7□□□□□ -1.66
CCHCR1Q8TD31 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms