Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC6.8□□□□□ -1.32
NKX2-3Q8TAU0 Mico1.1-201ENST00000611698 204 ntBASIC6.8□□□□□ -1.32
NKX2-3Q8TAU0 AP001282.2-201ENST00000616149 309 ntBASIC6.8□□□□□ -1.32
NKX2-3Q8TAU0 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
NKX2-3Q8TAU0 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
NKX2-3Q8TAU0 AL355488.2-201ENST00000609909 2850 ntBASIC6.8□□□□□ -1.32
NKX2-3Q8TAU0 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.8□□□□□ -1.32
NKX2-3Q8TAU0 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
NKX2-3Q8TAU0 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
NKX2-3Q8TAU0 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
NKX2-3Q8TAU0 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
NKX2-3Q8TAU0 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
NKX2-3Q8TAU0 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
NKX2-3Q8TAU0 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
NKX2-3Q8TAU0 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
NKX2-3Q8TAU0 SNORD62.1-201ENST00000362541 86 ntBASIC6.79□□□□□ -1.32
NKX2-3Q8TAU0 Y_RNA.65-201ENST00000362846 100 ntBASIC6.79□□□□□ -1.32
NKX2-3Q8TAU0 Y_RNA.83-201ENST00000363005 113 ntBASIC6.79□□□□□ -1.32
NKX2-3Q8TAU0 RNU6-984P-201ENST00000363236 109 ntBASIC6.79□□□□□ -1.32
NKX2-3Q8TAU0 RNU4-50P-201ENST00000364361 141 ntBASIC6.79□□□□□ -1.32
NKX2-3Q8TAU0 MIR130A-201ENST00000385274 89 ntBASIC6.79□□□□□ -1.32
NKX2-3Q8TAU0 AC096664.2-201ENST00000411843 406 ntBASIC6.79□□□□□ -1.32
NKX2-3Q8TAU0 AC234781.4-201ENST00000419384 244 ntBASIC6.79□□□□□ -1.32
NKX2-3Q8TAU0 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC6.79□□□□□ -1.32
NKX2-3Q8TAU0 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.79□□□□□ -1.32
NKX2-3Q8TAU0 RPL36AP6-201ENST00000435770 321 ntBASIC6.79□□□□□ -1.32
NKX2-3Q8TAU0 EEF1B2P6-201ENST00000445713 673 ntBASIC6.79□□□□□ -1.32
NKX2-3Q8TAU0 AL035551.1-201ENST00000446931 348 ntBASIC6.79□□□□□ -1.32
NKX2-3Q8TAU0 CHEK2P4-201ENST00000450340 246 ntBASIC6.79□□□□□ -1.32
NKX2-3Q8TAU0 RBMY2TP-201ENST00000451162 947 ntBASIC6.79□□□□□ -1.32
NKX2-3Q8TAU0 AC108161.1-201ENST00000461060 402 ntBASIC6.79□□□□□ -1.32
NKX2-3Q8TAU0 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.79□□□□□ -1.32
NKX2-3Q8TAU0 AC093267.1-201ENST00000489176 961 ntBASIC6.79□□□□□ -1.32
NKX2-3Q8TAU0 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC6.79□□□□□ -1.32
NKX2-3Q8TAU0 AC026979.1-201ENST00000492525 396 ntBASIC6.79□□□□□ -1.32
NKX2-3Q8TAU0 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC6.79□□□□□ -1.32
NKX2-3Q8TAU0 IL7R-208ENST00000511982 612 ntTSL 2 BASIC6.79□□□□□ -1.32
NKX2-3Q8TAU0 RNU6-1278P-201ENST00000516130 107 ntBASIC6.79□□□□□ -1.32
NKX2-3Q8TAU0 RNU6-479P-201ENST00000516348 105 ntBASIC6.79□□□□□ -1.32
NKX2-3Q8TAU0 SNORA43.3-201ENST00000517240 103 ntBASIC6.79□□□□□ -1.32
NKX2-3Q8TAU0 IGLV3-24-201ENST00000517477 197 ntBASIC6.79□□□□□ -1.32
NKX2-3Q8TAU0 AC021678.3-201ENST00000517893 476 ntBASIC6.79□□□□□ -1.32
NKX2-3Q8TAU0 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC6.79□□□□□ -1.32
NKX2-3Q8TAU0 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC6.79□□□□□ -1.32
NKX2-3Q8TAU0 MIR3941-201ENST00000582572 103 ntBASIC6.79□□□□□ -1.32
NKX2-3Q8TAU0 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.79□□□□□ -1.32
NKX2-3Q8TAU0 AL031666.3-201ENST00000609320 1006 ntBASIC6.79□□□□□ -1.32
NKX2-3Q8TAU0 DUSP12P1-201ENST00000612874 516 ntBASIC6.79□□□□□ -1.32
NKX2-3Q8TAU0 AC068870.2-201ENST00000620635 389 ntBASIC6.79□□□□□ -1.32
NKX2-3Q8TAU0 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC6.79□□□□□ -1.32
NKX2-3Q8TAU0 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC6.79□□□□□ -1.32
NKX2-3Q8TAU0 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
NKX2-3Q8TAU0 CDC27P2-201ENST00000425026 1922 ntBASIC6.79□□□□□ -1.32
NKX2-3Q8TAU0 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.79□□□□□ -1.32
NKX2-3Q8TAU0 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
NKX2-3Q8TAU0 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.79□□□□□ -1.32
NKX2-3Q8TAU0 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
NKX2-3Q8TAU0 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.79□□□□□ -1.32
NKX2-3Q8TAU0 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
NKX2-3Q8TAU0 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
NKX2-3Q8TAU0 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
NKX2-3Q8TAU0 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
NKX2-3Q8TAU0 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
NKX2-3Q8TAU0 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
NKX2-3Q8TAU0 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
NKX2-3Q8TAU0 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.78□□□□□ -1.32
NKX2-3Q8TAU0 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
NKX2-3Q8TAU0 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
NKX2-3Q8TAU0 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
NKX2-3Q8TAU0 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
NKX2-3Q8TAU0 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.78□□□□□ -1.32
NKX2-3Q8TAU0 RN7SKP103-201ENST00000363848 320 ntBASIC6.78□□□□□ -1.32
NKX2-3Q8TAU0 SNORD115-7-201ENST00000365306 82 ntBASIC6.78□□□□□ -1.32
NKX2-3Q8TAU0 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
NKX2-3Q8TAU0 Y_RNA.577-201ENST00000384794 101 ntBASIC6.78□□□□□ -1.32
NKX2-3Q8TAU0 MIR550A3-201ENST00000390735 95 ntBASIC6.78□□□□□ -1.32
NKX2-3Q8TAU0 RNU6-493P-201ENST00000391321 108 ntBASIC6.78□□□□□ -1.32
NKX2-3Q8TAU0 RN7SKP235-201ENST00000410662 305 ntBASIC6.78□□□□□ -1.32
NKX2-3Q8TAU0 AL139095.3-201ENST00000419672 1203 ntBASIC6.78□□□□□ -1.32
NKX2-3Q8TAU0 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC6.78□□□□□ -1.32
NKX2-3Q8TAU0 NOTCH2P1-201ENST00000443481 624 ntBASIC6.78□□□□□ -1.32
NKX2-3Q8TAU0 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC6.78□□□□□ -1.32
NKX2-3Q8TAU0 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.78□□□□□ -1.32
NKX2-3Q8TAU0 CBX1P2-201ENST00000453841 458 ntBASIC6.78□□□□□ -1.32
NKX2-3Q8TAU0 FTH1P21-201ENST00000512179 511 ntBASIC6.78□□□□□ -1.32
NKX2-3Q8TAU0 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC6.78□□□□□ -1.32
NKX2-3Q8TAU0 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.78□□□□□ -1.32
NKX2-3Q8TAU0 SNORD39.3-201ENST00000584451 71 ntBASIC6.78□□□□□ -1.32
NKX2-3Q8TAU0 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
NKX2-3Q8TAU0 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
NKX2-3Q8TAU0 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
NKX2-3Q8TAU0 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.78□□□□□ -1.32
NKX2-3Q8TAU0 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
NKX2-3Q8TAU0 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
NKX2-3Q8TAU0 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
NKX2-3Q8TAU0 ALB-214ENST00000509063 1911 ntTSL 5 BASIC6.78□□□□□ -1.32
NKX2-3Q8TAU0 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
NKX2-3Q8TAU0 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
NKX2-3Q8TAU0 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.77□□□□□ -1.33
NKX2-3Q8TAU0 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms