Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
DEPDC4Q8N2C3 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
DEPDC4Q8N2C3 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
DEPDC4Q8N2C3 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
DEPDC4Q8N2C3 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
DEPDC4Q8N2C3 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
DEPDC4Q8N2C3 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
DEPDC4Q8N2C3 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
DEPDC4Q8N2C3 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
DEPDC4Q8N2C3 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
DEPDC4Q8N2C3 Y_RNA.389-201ENST00000383924 113 ntBASIC5.78□□□□□ -1.48
DEPDC4Q8N2C3 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
DEPDC4Q8N2C3 MIR1282-201ENST00000408865 101 ntBASIC5.78□□□□□ -1.48
DEPDC4Q8N2C3 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
DEPDC4Q8N2C3 AC092809.3-201ENST00000415453 231 ntBASIC5.78□□□□□ -1.48
DEPDC4Q8N2C3 RPL7AP51-201ENST00000422016 760 ntBASIC5.78□□□□□ -1.48
DEPDC4Q8N2C3 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
DEPDC4Q8N2C3 AL590399.6-201ENST00000446396 307 ntBASIC5.78□□□□□ -1.48
DEPDC4Q8N2C3 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
DEPDC4Q8N2C3 RPL29P29-201ENST00000448725 423 ntBASIC5.78□□□□□ -1.48
DEPDC4Q8N2C3 AL133445.1-201ENST00000467051 452 ntBASIC5.78□□□□□ -1.48
DEPDC4Q8N2C3 RPS27AP13-201ENST00000498403 237 ntBASIC5.78□□□□□ -1.48
DEPDC4Q8N2C3 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC5.78□□□□□ -1.48
DEPDC4Q8N2C3 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC5.78□□□□□ -1.48
DEPDC4Q8N2C3 AC069113.1-201ENST00000517763 267 ntBASIC5.78□□□□□ -1.48
DEPDC4Q8N2C3 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.78□□□□□ -1.48
DEPDC4Q8N2C3 ERHP1-201ENST00000523006 310 ntBASIC5.78□□□□□ -1.48
DEPDC4Q8N2C3 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.78□□□□□ -1.48
DEPDC4Q8N2C3 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
DEPDC4Q8N2C3 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.78□□□□□ -1.48
DEPDC4Q8N2C3 AC025423.5-201ENST00000550230 219 ntBASIC5.78□□□□□ -1.48
DEPDC4Q8N2C3 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.78□□□□□ -1.48
DEPDC4Q8N2C3 MEG8-215ENST00000555354 469 ntTSL 3 BASIC5.78□□□□□ -1.48
DEPDC4Q8N2C3 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
DEPDC4Q8N2C3 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.78□□□□□ -1.48
DEPDC4Q8N2C3 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC5.78□□□□□ -1.48
DEPDC4Q8N2C3 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
DEPDC4Q8N2C3 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC5.78□□□□□ -1.48
DEPDC4Q8N2C3 AC012119.1-201ENST00000603184 222 ntBASIC5.78□□□□□ -1.48
DEPDC4Q8N2C3 AC092447.9-201ENST00000603395 144 ntBASIC5.78□□□□□ -1.48
DEPDC4Q8N2C3 AC073488.3-201ENST00000631611 778 ntBASIC5.78□□□□□ -1.48
DEPDC4Q8N2C3 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC5.78□□□□□ -1.48
DEPDC4Q8N2C3 AL137141.1-201ENST00000624622 4836 ntBASIC5.78□□□□□ -1.48
DEPDC4Q8N2C3 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.78□□□□□ -1.48
DEPDC4Q8N2C3 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
DEPDC4Q8N2C3 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.78□□□□□ -1.48
DEPDC4Q8N2C3 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
DEPDC4Q8N2C3 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
DEPDC4Q8N2C3 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
DEPDC4Q8N2C3 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
DEPDC4Q8N2C3 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
DEPDC4Q8N2C3 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
DEPDC4Q8N2C3 EOGT-210ENST00000615922 1931 ntBASIC5.78□□□□□ -1.48
DEPDC4Q8N2C3 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
DEPDC4Q8N2C3 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
DEPDC4Q8N2C3 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
DEPDC4Q8N2C3 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.77□□□□□ -1.49
DEPDC4Q8N2C3 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
DEPDC4Q8N2C3 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.77□□□□□ -1.49
DEPDC4Q8N2C3 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
DEPDC4Q8N2C3 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC5.77□□□□□ -1.49
DEPDC4Q8N2C3 AC004076.2-201ENST00000620532 3323 ntBASIC5.77□□□□□ -1.49
DEPDC4Q8N2C3 AC090971.4-201ENST00000560291 1800 ntBASIC5.77□□□□□ -1.49
DEPDC4Q8N2C3 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
DEPDC4Q8N2C3 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
DEPDC4Q8N2C3 RNU6-266P-201ENST00000364225 107 ntBASIC5.77□□□□□ -1.49
DEPDC4Q8N2C3 Y_RNA.380-201ENST00000365663 111 ntBASIC5.77□□□□□ -1.49
DEPDC4Q8N2C3 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
DEPDC4Q8N2C3 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
DEPDC4Q8N2C3 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.77□□□□□ -1.49
DEPDC4Q8N2C3 DPPA2P2-201ENST00000418220 897 ntBASIC5.77□□□□□ -1.49
DEPDC4Q8N2C3 THEM7P-201ENST00000419556 672 ntBASIC5.77□□□□□ -1.49
DEPDC4Q8N2C3 AC243428.1-201ENST00000421099 264 ntBASIC5.77□□□□□ -1.49
DEPDC4Q8N2C3 AL590399.2-201ENST00000427536 309 ntBASIC5.77□□□□□ -1.49
DEPDC4Q8N2C3 RPS20P1-201ENST00000434853 354 ntBASIC5.77□□□□□ -1.49
DEPDC4Q8N2C3 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
DEPDC4Q8N2C3 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC5.77□□□□□ -1.49
DEPDC4Q8N2C3 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC5.77□□□□□ -1.49
DEPDC4Q8N2C3 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.77□□□□□ -1.49
DEPDC4Q8N2C3 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
DEPDC4Q8N2C3 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC5.77□□□□□ -1.49
DEPDC4Q8N2C3 RNA5SP384-201ENST00000516615 116 ntBASIC5.77□□□□□ -1.49
DEPDC4Q8N2C3 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC5.77□□□□□ -1.49
DEPDC4Q8N2C3 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
DEPDC4Q8N2C3 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC5.77□□□□□ -1.49
DEPDC4Q8N2C3 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC5.77□□□□□ -1.49
DEPDC4Q8N2C3 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.77□□□□□ -1.49
DEPDC4Q8N2C3 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC5.77□□□□□ -1.49
DEPDC4Q8N2C3 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.77□□□□□ -1.49
DEPDC4Q8N2C3 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.77□□□□□ -1.49
DEPDC4Q8N2C3 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.77□□□□□ -1.49
DEPDC4Q8N2C3 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.77□□□□□ -1.49
DEPDC4Q8N2C3 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.77□□□□□ -1.49
DEPDC4Q8N2C3 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC5.77□□□□□ -1.49
DEPDC4Q8N2C3 AC114477.1-201ENST00000605097 605 ntBASIC5.77□□□□□ -1.49
DEPDC4Q8N2C3 AL589743.6-201ENST00000611025 117 ntBASIC5.77□□□□□ -1.49
DEPDC4Q8N2C3 IGKV2OR2-10-201ENST00000613976 311 ntBASIC5.77□□□□□ -1.49
DEPDC4Q8N2C3 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.77□□□□□ -1.49
DEPDC4Q8N2C3 U73479.1-201ENST00000618062 168 ntBASIC5.77□□□□□ -1.49
DEPDC4Q8N2C3 AL591926.1-201ENST00000620542 217 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms