Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SYNE4Q8N205 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
SYNE4Q8N205 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
SYNE4Q8N205 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SYNE4Q8N205 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
SYNE4Q8N205 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5□□□□□ -1.61
SYNE4Q8N205 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.99□□□□□ -1.61
SYNE4Q8N205 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
SYNE4Q8N205 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SYNE4Q8N205 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
SYNE4Q8N205 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SYNE4Q8N205 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
SYNE4Q8N205 SNORA60-201ENST00000362396 134 ntBASIC4.99□□□□□ -1.61
SYNE4Q8N205 RNU6-433P-201ENST00000363216 104 ntBASIC4.99□□□□□ -1.61
SYNE4Q8N205 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
SYNE4Q8N205 SNORA5A-201ENST00000384111 134 ntBASIC4.99□□□□□ -1.61
SYNE4Q8N205 RNU6-1042P-201ENST00000384204 107 ntBASIC4.99□□□□□ -1.61
SYNE4Q8N205 RNU6-297P-201ENST00000384636 107 ntBASIC4.99□□□□□ -1.61
SYNE4Q8N205 MIR217-201ENST00000384817 110 ntBASIC4.99□□□□□ -1.61
SYNE4Q8N205 MIR34B-201ENST00000385076 84 ntBASIC4.99□□□□□ -1.61
SYNE4Q8N205 OR51A3P-201ENST00000413596 924 ntBASIC4.99□□□□□ -1.61
SYNE4Q8N205 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.99□□□□□ -1.61
SYNE4Q8N205 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.99□□□□□ -1.61
SYNE4Q8N205 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.99□□□□□ -1.61
SYNE4Q8N205 PAXBP1P1-201ENST00000449315 447 ntBASIC4.99□□□□□ -1.61
SYNE4Q8N205 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.99□□□□□ -1.61
SYNE4Q8N205 RPL31P58-201ENST00000469001 379 ntBASIC4.99□□□□□ -1.61
SYNE4Q8N205 AC092989.1-201ENST00000481235 277 ntBASIC4.99□□□□□ -1.61
SYNE4Q8N205 AC069439.1-201ENST00000494739 167 ntBASIC4.99□□□□□ -1.61
SYNE4Q8N205 AC108941.1-201ENST00000502853 530 ntBASIC4.99□□□□□ -1.61
SYNE4Q8N205 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.99□□□□□ -1.61
SYNE4Q8N205 ARL2BPP6-201ENST00000512757 439 ntBASIC4.99□□□□□ -1.61
SYNE4Q8N205 RNU6-314P-201ENST00000516574 104 ntBASIC4.99□□□□□ -1.61
SYNE4Q8N205 IGKV2-36-201ENST00000519999 223 ntBASIC4.99□□□□□ -1.61
SYNE4Q8N205 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.99□□□□□ -1.61
SYNE4Q8N205 AC104383.1-201ENST00000530297 370 ntBASIC4.99□□□□□ -1.61
SYNE4Q8N205 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC4.99□□□□□ -1.61
SYNE4Q8N205 CYCSP30-201ENST00000546447 172 ntBASIC4.99□□□□□ -1.61
SYNE4Q8N205 AL358913.1-201ENST00000554342 121 ntBASIC4.99□□□□□ -1.61
SYNE4Q8N205 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.99□□□□□ -1.61
SYNE4Q8N205 AL390334.1-201ENST00000556395 450 ntBASIC4.99□□□□□ -1.61
SYNE4Q8N205 RPL21P7-201ENST00000557463 483 ntBASIC4.99□□□□□ -1.61
SYNE4Q8N205 BPTFP1-201ENST00000579209 492 ntBASIC4.99□□□□□ -1.61
SYNE4Q8N205 AC090312.2-201ENST00000582687 378 ntBASIC4.99□□□□□ -1.61
SYNE4Q8N205 MIR432-201ENST00000606207 94 ntBASIC4.99□□□□□ -1.61
SYNE4Q8N205 AC023509.5-201ENST00000617434 807 ntBASIC4.99□□□□□ -1.61
SYNE4Q8N205 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SYNE4Q8N205 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
SYNE4Q8N205 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
SYNE4Q8N205 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.99□□□□□ -1.61
SYNE4Q8N205 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SYNE4Q8N205 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.98□□□□□ -1.61
SYNE4Q8N205 MARK2P15-201ENST00000432204 2186 ntBASIC4.98□□□□□ -1.61
SYNE4Q8N205 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SYNE4Q8N205 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SYNE4Q8N205 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
SYNE4Q8N205 SNORA72.1-201ENST00000363485 129 ntBASIC4.98□□□□□ -1.61
SYNE4Q8N205 AL359643.1-201ENST00000404109 423 ntBASIC4.98□□□□□ -1.61
SYNE4Q8N205 MTCYBP36-201ENST00000404146 440 ntBASIC4.98□□□□□ -1.61
SYNE4Q8N205 NDUFB4P4-201ENST00000404822 243 ntBASIC4.98□□□□□ -1.61
SYNE4Q8N205 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SYNE4Q8N205 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.98□□□□□ -1.61
SYNE4Q8N205 AC092647.1-201ENST00000420654 287 ntBASIC4.98□□□□□ -1.61
SYNE4Q8N205 RPL7P30-201ENST00000420888 709 ntBASIC4.98□□□□□ -1.61
SYNE4Q8N205 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.98□□□□□ -1.61
SYNE4Q8N205 AC073069.1-201ENST00000428657 441 ntBASIC4.98□□□□□ -1.61
SYNE4Q8N205 DYNLL1P7-201ENST00000429273 258 ntBASIC4.98□□□□□ -1.61
SYNE4Q8N205 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.98□□□□□ -1.61
SYNE4Q8N205 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC4.98□□□□□ -1.61
SYNE4Q8N205 NFU1P2-201ENST00000448700 469 ntBASIC4.98□□□□□ -1.61
SYNE4Q8N205 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SYNE4Q8N205 RPL23AP35-201ENST00000451906 501 ntBASIC4.98□□□□□ -1.61
SYNE4Q8N205 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.98□□□□□ -1.61
SYNE4Q8N205 RPL36AP13-201ENST00000457490 317 ntBASIC4.98□□□□□ -1.61
SYNE4Q8N205 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.98□□□□□ -1.61
SYNE4Q8N205 PLGLA-201ENST00000465668 449 ntBASIC4.98□□□□□ -1.61
SYNE4Q8N205 RPS20P21-201ENST00000466859 343 ntBASIC4.98□□□□□ -1.61
SYNE4Q8N205 RPL23AP71-201ENST00000470966 469 ntBASIC4.98□□□□□ -1.61
SYNE4Q8N205 RPS27P23-201ENST00000487608 251 ntBASIC4.98□□□□□ -1.61
SYNE4Q8N205 OR4G11P-201ENST00000492842 939 ntBASIC4.98□□□□□ -1.61
SYNE4Q8N205 RPL29P14-201ENST00000495837 428 ntBASIC4.98□□□□□ -1.61
SYNE4Q8N205 AL358832.1-201ENST00000497800 389 ntBASIC4.98□□□□□ -1.61
SYNE4Q8N205 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.98□□□□□ -1.61
SYNE4Q8N205 AC117522.1-201ENST00000509821 380 ntBASIC4.98□□□□□ -1.61
SYNE4Q8N205 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.98□□□□□ -1.61
SYNE4Q8N205 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.98□□□□□ -1.61
SYNE4Q8N205 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.98□□□□□ -1.61
SYNE4Q8N205 DEFB108A-201ENST00000530110 222 ntBASIC4.98□□□□□ -1.61
SYNE4Q8N205 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SYNE4Q8N205 AC100770.1-201ENST00000532310 322 ntBASIC4.98□□□□□ -1.61
SYNE4Q8N205 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.98□□□□□ -1.61
SYNE4Q8N205 NTS-203ENST00000551529 801 ntTSL 3 BASIC4.98□□□□□ -1.61
SYNE4Q8N205 AC124947.2-202ENST00000552735 133 ntBASIC4.98□□□□□ -1.61
SYNE4Q8N205 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.98□□□□□ -1.61
SYNE4Q8N205 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.98□□□□□ -1.61
SYNE4Q8N205 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC4.98□□□□□ -1.61
SYNE4Q8N205 GTF2IP8-201ENST00000560687 584 ntBASIC4.98□□□□□ -1.61
SYNE4Q8N205 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.98□□□□□ -1.61
SYNE4Q8N205 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.98□□□□□ -1.61
SYNE4Q8N205 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms