Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 RPS7P2-201ENST00000435134 607 ntBASIC3.15□□□□□ -1.91
NUDCD3Q8IVD9 RPS12P18-201ENST00000442381 270 ntBASIC3.15□□□□□ -1.91
NUDCD3Q8IVD9 NDUFA5P7-201ENST00000452914 242 ntBASIC3.15□□□□□ -1.91
NUDCD3Q8IVD9 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.15□□□□□ -1.91
NUDCD3Q8IVD9 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.15□□□□□ -1.91
NUDCD3Q8IVD9 RPS17P11-201ENST00000474297 293 ntBASIC3.15□□□□□ -1.91
NUDCD3Q8IVD9 AC006483.1-201ENST00000487308 313 ntBASIC3.15□□□□□ -1.91
NUDCD3Q8IVD9 RPL7P38-201ENST00000488396 739 ntBASIC3.15□□□□□ -1.91
NUDCD3Q8IVD9 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.15□□□□□ -1.91
NUDCD3Q8IVD9 MTCO3P27-201ENST00000514397 196 ntBASIC3.15□□□□□ -1.91
NUDCD3Q8IVD9 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC3.15□□□□□ -1.91
NUDCD3Q8IVD9 RNU1-45P-201ENST00000517191 141 ntBASIC3.15□□□□□ -1.91
NUDCD3Q8IVD9 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.15□□□□□ -1.91
NUDCD3Q8IVD9 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.15□□□□□ -1.91
NUDCD3Q8IVD9 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.15□□□□□ -1.91
NUDCD3Q8IVD9 AP003385.6-201ENST00000531603 374 ntBASIC3.15□□□□□ -1.91
NUDCD3Q8IVD9 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC3.15□□□□□ -1.91
NUDCD3Q8IVD9 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.15□□□□□ -1.91
NUDCD3Q8IVD9 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.15□□□□□ -1.91
NUDCD3Q8IVD9 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.15□□□□□ -1.91
NUDCD3Q8IVD9 ZNF971P-201ENST00000562068 1249 ntBASIC3.15□□□□□ -1.91
NUDCD3Q8IVD9 AC055876.1-202ENST00000567053 138 ntBASIC3.15□□□□□ -1.91
NUDCD3Q8IVD9 MTND4LP25-201ENST00000570218 163 ntBASIC3.15□□□□□ -1.91
NUDCD3Q8IVD9 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.15□□□□□ -1.91
NUDCD3Q8IVD9 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.15□□□□□ -1.91
NUDCD3Q8IVD9 MTATP6P2-201ENST00000603319 678 ntBASIC3.15□□□□□ -1.91
NUDCD3Q8IVD9 AC120053.1-201ENST00000607706 736 ntBASIC3.15□□□□□ -1.91
NUDCD3Q8IVD9 VN1R74P-201ENST00000613259 503 ntBASIC3.15□□□□□ -1.91
NUDCD3Q8IVD9 AC009093.8-201ENST00000641769 292 ntBASIC3.15□□□□□ -1.91
NUDCD3Q8IVD9 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
NUDCD3Q8IVD9 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
NUDCD3Q8IVD9 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.14□□□□□ -1.91
NUDCD3Q8IVD9 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC3.14□□□□□ -1.91
NUDCD3Q8IVD9 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.14□□□□□ -1.91
NUDCD3Q8IVD9 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
NUDCD3Q8IVD9 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
NUDCD3Q8IVD9 SNORA63.3-201ENST00000362682 132 ntBASIC3.14□□□□□ -1.91
NUDCD3Q8IVD9 RNU6-989P-201ENST00000362756 107 ntBASIC3.14□□□□□ -1.91
NUDCD3Q8IVD9 RNU6-115P-201ENST00000364310 107 ntBASIC3.14□□□□□ -1.91
NUDCD3Q8IVD9 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
NUDCD3Q8IVD9 SNORD116-23-201ENST00000384645 92 ntBASIC3.14□□□□□ -1.91
NUDCD3Q8IVD9 AL121978.1-201ENST00000402778 359 ntBASIC3.14□□□□□ -1.91
NUDCD3Q8IVD9 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.14□□□□□ -1.91
NUDCD3Q8IVD9 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.14□□□□□ -1.91
NUDCD3Q8IVD9 AL035410.1-201ENST00000427409 427 ntBASIC3.14□□□□□ -1.91
NUDCD3Q8IVD9 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.14□□□□□ -1.91
NUDCD3Q8IVD9 UBE2V1P6-201ENST00000430840 422 ntBASIC3.14□□□□□ -1.91
NUDCD3Q8IVD9 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.14□□□□□ -1.91
NUDCD3Q8IVD9 KCTD10P1-201ENST00000434203 625 ntBASIC3.14□□□□□ -1.91
NUDCD3Q8IVD9 AC007389.2-201ENST00000434630 306 ntBASIC3.14□□□□□ -1.91
NUDCD3Q8IVD9 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.14□□□□□ -1.91
NUDCD3Q8IVD9 HSPE1P28-201ENST00000443139 211 ntBASIC3.14□□□□□ -1.91
NUDCD3Q8IVD9 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.14□□□□□ -1.91
NUDCD3Q8IVD9 HMGN2P13-201ENST00000476476 274 ntBASIC3.14□□□□□ -1.91
NUDCD3Q8IVD9 ACTR3P3-201ENST00000480448 893 ntBASIC3.14□□□□□ -1.91
NUDCD3Q8IVD9 AC106707.2-201ENST00000484182 374 ntBASIC3.14□□□□□ -1.91
NUDCD3Q8IVD9 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
NUDCD3Q8IVD9 NAMPTP2-201ENST00000505629 1115 ntBASIC3.14□□□□□ -1.91
NUDCD3Q8IVD9 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.14□□□□□ -1.91
NUDCD3Q8IVD9 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.14□□□□□ -1.91
NUDCD3Q8IVD9 MTCYBP37-201ENST00000510642 1133 ntBASIC3.14□□□□□ -1.91
NUDCD3Q8IVD9 RNA5SP385-201ENST00000515947 110 ntBASIC3.14□□□□□ -1.91
NUDCD3Q8IVD9 RNU1-95P-201ENST00000516357 160 ntBASIC3.14□□□□□ -1.91
NUDCD3Q8IVD9 RNU6-885P-201ENST00000516607 104 ntBASIC3.14□□□□□ -1.91
NUDCD3Q8IVD9 RNU1-128P-201ENST00000516704 160 ntBASIC3.14□□□□□ -1.91
NUDCD3Q8IVD9 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.14□□□□□ -1.91
NUDCD3Q8IVD9 AP003355.1-201ENST00000518956 587 ntBASIC3.14□□□□□ -1.91
NUDCD3Q8IVD9 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.14□□□□□ -1.91
NUDCD3Q8IVD9 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.14□□□□□ -1.91
NUDCD3Q8IVD9 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.14□□□□□ -1.91
NUDCD3Q8IVD9 BNIP3P5-201ENST00000562290 498 ntBASIC3.14□□□□□ -1.91
NUDCD3Q8IVD9 MIR4506-201ENST00000584693 77 ntBASIC3.14□□□□□ -1.91
NUDCD3Q8IVD9 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.14□□□□□ -1.91
NUDCD3Q8IVD9 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
NUDCD3Q8IVD9 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.14□□□□□ -1.91
NUDCD3Q8IVD9 AL356863.1-201ENST00000623378 1080 ntBASIC3.14□□□□□ -1.91
NUDCD3Q8IVD9 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
NUDCD3Q8IVD9 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
NUDCD3Q8IVD9 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.14□□□□□ -1.91
NUDCD3Q8IVD9 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.14□□□□□ -1.91
NUDCD3Q8IVD9 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
NUDCD3Q8IVD9 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NUDCD3Q8IVD9 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NUDCD3Q8IVD9 AC130650.2-201ENST00000618736 2403 ntBASIC3.13□□□□□ -1.91
NUDCD3Q8IVD9 ZNF285B-201ENST00000561698 1767 ntBASIC3.13□□□□□ -1.91
NUDCD3Q8IVD9 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.13□□□□□ -1.91
NUDCD3Q8IVD9 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
NUDCD3Q8IVD9 RNU6-582P-201ENST00000362989 107 ntBASIC3.13□□□□□ -1.91
NUDCD3Q8IVD9 RNVU1-3-201ENST00000364313 161 ntBASIC3.13□□□□□ -1.91
NUDCD3Q8IVD9 SNORA51.4-201ENST00000364993 124 ntBASIC3.13□□□□□ -1.91
NUDCD3Q8IVD9 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NUDCD3Q8IVD9 RNU6-761P-201ENST00000384148 107 ntBASIC3.13□□□□□ -1.91
NUDCD3Q8IVD9 RNU6-837P-201ENST00000391056 108 ntBASIC3.13□□□□□ -1.91
NUDCD3Q8IVD9 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
NUDCD3Q8IVD9 SAR1AP2-201ENST00000392696 594 ntBASIC3.13□□□□□ -1.91
NUDCD3Q8IVD9 MCTS2P-201ENST00000394552 546 ntBASIC3.13□□□□□ -1.91
NUDCD3Q8IVD9 AC025750.1-201ENST00000399891 379 ntBASIC3.13□□□□□ -1.91
NUDCD3Q8IVD9 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.13□□□□□ -1.91
NUDCD3Q8IVD9 FNDC3CP-201ENST00000420795 1155 ntBASIC3.13□□□□□ -1.91
NUDCD3Q8IVD9 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms