Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
C9orf139Q6ZV77 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
C9orf139Q6ZV77 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.57□□□□□ -1.84
C9orf139Q6ZV77 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 GHR-202ENST00000357703 4316 ntTSL 5 BASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 MIR383-201ENST00000362257 73 ntBASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 RNU1-132P-201ENST00000364300 164 ntBASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 RNA5SP479-201ENST00000364858 117 ntBASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 RNU5A-6P-201ENST00000384136 116 ntBASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 RNU6-533P-201ENST00000384144 107 ntBASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 RNU6-769P-201ENST00000384407 104 ntBASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 AC016769.3-201ENST00000396562 315 ntBASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 AL133384.1-201ENST00000412744 351 ntBASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 Z74021.1-201ENST00000423610 407 ntBASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 AL596276.1-201ENST00000434465 418 ntBASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 UBE2V1P8-201ENST00000437166 265 ntBASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 RSU1P2-202ENST00000437884 485 ntBASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 PGBD4P3-201ENST00000440731 581 ntBASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 AL353572.1-201ENST00000442490 417 ntBASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 ARPC3P5-201ENST00000448802 534 ntBASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 PAXBP1P1-201ENST00000449315 447 ntBASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 AL590365.1-201ENST00000450788 243 ntBASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 AC003071.1-201ENST00000451219 789 ntBASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 RPL7P22-201ENST00000466005 733 ntBASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 RPL31P50-201ENST00000471002 296 ntBASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 RPL9P6-201ENST00000492764 598 ntBASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 AC108941.1-201ENST00000502853 530 ntBASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 AL592156.1-201ENST00000508758 304 ntBASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 AC091133.4-201ENST00000511142 308 ntBASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 KCTD9P2-201ENST00000512203 1013 ntBASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 AC108064.1-201ENST00000513791 460 ntBASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 RNU6-1178P-201ENST00000516674 107 ntBASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 NRON-201ENST00000517270 370 ntBASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 ZNF705CP-201ENST00000530515 889 ntBASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 AC022878.1-201ENST00000530684 149 ntBASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 AC022882.1-201ENST00000532142 501 ntBASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 TRAV8-5-201ENST00000537369 341 ntBASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 AC008127.2-201ENST00000549925 1075 ntBASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 RPL21P7-201ENST00000557463 483 ntBASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 MIR4458-201ENST00000578872 75 ntBASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 AC093227.2-201ENST00000589357 285 ntBASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 AC022916.3-201ENST00000592961 742 ntBASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 AC090578.1-201ENST00000604955 591 ntBASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 AL513477.2-201ENST00000607858 568 ntBASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 AC008250.2-201ENST00000615261 205 ntBASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 MIR6715B-201ENST00000637172 77 ntBASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 AL596275.2-204ENST00000641628 552 ntBASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 AL596275.2-206ENST00000641957 626 ntBASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
C9orf139Q6ZV77 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.55□□□□□ -1.84
C9orf139Q6ZV77 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.55□□□□□ -1.84
C9orf139Q6ZV77 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
C9orf139Q6ZV77 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
C9orf139Q6ZV77 SAGE4P-201ENST00000442271 3381 ntBASIC3.55□□□□□ -1.84
C9orf139Q6ZV77 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.55□□□□□ -1.84
C9orf139Q6ZV77 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
C9orf139Q6ZV77 OR52B1P-201ENST00000316506 909 ntBASIC3.55□□□□□ -1.84
C9orf139Q6ZV77 MIR331-201ENST00000362302 94 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms